Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq14 176 1e-39 >seq14 Length=60807478 Score = 176 bits (194), Expect = 1e-39 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 38581 TGCTGCGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA 38640 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38780459 TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA 38780518 Query 38641 GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC 38682 |||||||||||||||||||||||||||||||||||||||||| Sbjct 38780519 GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC 38780560 Score = 176 bits (194), Expect = 1e-39 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 38581 TGCTGCGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA 38640 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38781996 TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA 38781937 Query 38641 GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC 38682 |||||||||||||||||||||||||||||||||||||||||| Sbjct 38781936 GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC 38781895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155082265914368