Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15]
1,376 sequences; 930,507,853 total letters
Query= NC_002166.1
Length=40751
Score E
Sequences producing significant alignments: (Bits) Value
seq477 1173 0.0
>seq477
Length=38297
Score = 1173 bits (1300), Expect = 0.0
Identities = 2060/2984 (69%), Gaps = 93/2984 (3%)
Strand=Plus/Minus
Query 2210 TTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCTGCGTGAGCCTGATTTCAA 2269
||| ||||||||| | |||| || || || ||| ||| | || ||||| ||||
Sbjct 19374 TTACCGATGAACGTAATATGCAGATCAGCACCGTTTGGTCTTGCATAAGACTGATATCAA 19315
Query 2270 CGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAACAGACCAGAATGACAACCGTAAAA 2329
| | || |||| | ||||| ||||| || ||||| | |||||| | ||| | |
Sbjct 19314 CCGTGACAGCATCTCTCCCGCTAGATGTGTTTGAAACTGTT---AATGACCAACGTCAGA 19258
Query 2330 AAGT-GGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAATCAGTACATG 2388
|||| ||| || ||||| |||||||| || ||||| | | || ||| | | |||
Sbjct 19257 AAGTCGGAAACGAA-AATCCCCTGGCGCGCCTCCTGCGATTCCGTCCAAATAATTTTATG 19199
Query 2389 ACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGTAACGCATAT 2448
||||| | ||||| | || || ||||| ||||| |||||| || || || || ||
Sbjct 19198 ACCGCGCTTGAATTTCGCGAAGCGATGACAATGCAACTCTGTGCATATGGGAATGCGTAC 19139
Query 2449 GCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTTCAGTCTGCC 2508
|| | || || || || |||| ||||| ||||||||| | | ||| | | |||
Sbjct 19138 GCCCACGTTGAGCGAAATAGCGTTGGTGATGTGATCAGCATGGTTCCGTTAATGAGCGCC 19079
Query 2509 AATATGGATGTGAAGCTC-GT-----CGGaaaaaaaGTGGTTTATCGCTATCAACGCGAC 2562
|||||||||||| ||| || ||| ||||| || |||| |||||| |||| ||
Sbjct 19078 AATATGGATGTGCGACTCAGTGATAACGGCAAAAACGTTATTTACCGCTATAAACGAGAT 19019
Query 2563 AGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATTCACC 2622
| |||||||| ||||| || ||||| ||||| || || ||||| || || || | |
Sbjct 19018 ACGGAATACGCAGACTTCAAGCCTAAAGAAATTTTCCATCTGAAAGGTTTTGGTTTTAAC 18959
Query 2623 GGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGT---AAATCGGCAGGTGTGGCAGTT 2679
|| || || || ||||| || | || || | || |||||||| |||||||| |
Sbjct 18958 GGTCTAGTGGGGCTGTCTCCGTTGGCCTT---CAGTGCGAAATCGGCCGGTGTGGCGATC 18902
Query 2680 GCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTC 2739
|| ||||| ||| | ||||| || || ||||| || ||||||||||| |||||||| ||
Sbjct 18901 GCTATGGAAGACAATCAGCGCGAGTTTTTTGCTAATGGCGCCAAGTCACCGCAAATTCTG 18842
Query 2740 TCAACTGGCGAAAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAATTTCAAA 2799
|| | | || ||||| ||| || | ||||| || | ||||| || |||||
Sbjct 18841 ATGACAGATGGCAAGGTGCTTACTAAAGATCAGCGTGGACAACTGGAAGAAAACTTCAAG 18782
Query 2800 GAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTCTACA 2859
||||||||||||||||| || ||||| ||||| |||||||||||| || ||| | ||
Sbjct 18781 GAGATCGCCGGCGGCCCAGTTAAAAAGCGCCTTTGGATTCTGGAAAGTGGATTTACCACT 18722
Query 2860 TCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAGGTA 2919
||| || || || |||| |||| | ||||| | | | || || |||||||||
Sbjct 18721 CAGGCTATAGGGATATCTCCAGCGGATTCTCAAATGCTTGAAGCGCGTAAGTTTCAGGTA 18662
Query 2920 AGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAATCA 2979
||||||||||| || | ||| || ||||||||||| || || || ||||||||| ||
Sbjct 18661 GCCGAACTGGCGCGCTTTTATGGTGTCCCGCCTCACCTGGTAGGGGATGTCGAGAAAACA 18602
Query 2980 ACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTGCAG 3039
|| ||||| || || || || || || ||||| ||||||||||||||| | |
Sbjct 18601 ACTTCATGGGGTAGCGGTATTGAACAACAAAACCTCGGATTCCTGCAGTACACCTTAAAA 18542
Query 3040 CCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGATGTT 3099
|| ||| | | |||||| |||| ||| |||| ||| | | | | |||
Sbjct 18541 CCTTATCTTGATCGCTGGGAATACAGTATTGAGCGCTGGTTGGTAAAAGATGCCGATCAG 18482
Query 3100 GGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATCCCGC 3159
||| | |||||||||||||| || | ||||| || ||| | || |||||| || ||||
Sbjct 18481 GGCAGGATTCATGCTGAGCATAATTTAGACGGTCTACTGCGCGGTGATTCGACAAGCCGC 18422
Query 3160 GCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCGACGA 3219
|| | || ||| | |||||| | | || | |||||| ||||||| | | |||
Sbjct 18421 GCCTCTTTCATGCAAACAATGGTGAATACTGGTATTCGCACCGTCAACGAAGTCAGGCGA 18362
Query 3220 ACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATACGTG 3279
||| ||| | || || | || || || ||||| || | ||||||||||| ||||
Sbjct 18361 CTGGATAACTTGCCACCGCTTCCCGGCGGAGATGTAGCGACACGCCAGTCGCAGAACGTA 18302
Query 3280 CCGATCACCGATTTAGGAACCAACAAAGAGCCCCGTAATAACGGGGCTTAATTTTTATGG 3339
|| || |||||| | |||| | |||||||||||| | | ||||||||||||||||||||
Sbjct 18301 CCCATTACCGATCTCGGAAGAACCAAAGAGCCCCGCACTGACGGGGCTTAATTTTTATGG 18242
Query 3340 GGGCCGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCAAATTCA 3399
||||| | |||||||| || ||||| ||| | |||||| |||||||||| || || |
Sbjct 18241 GGGCCATGATGCCTGATATTCAGAAAACCCTGGCGTTCGACCAGACAGAAATAAAGTTTA 18182
Query 3400 CCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACACCGATT 3459
|||| |||||| | | || | |||||| ||||||||||| ||||| || || || || |
Sbjct 18181 CCGGCGACGGTGATAAAGGCACTTTTGAGGGCTACGCCTCAGTTTTCAACAATACGGACT 18122
Query 3460 CCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAGACCCGAA 3519
|||| || ||||| || ||||| || || || | | | || || | |||||
Sbjct 18121 CCGACGGAGACATTATCCTGCCAGGTGCATTCAGCGGTGTTATTGCTGGTCAAAGCCGAA 18062
Query 3520 AAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGGGACAGCC 3579
| || || ||||| |||||||| |||| | | | || ||||| |||||||| |
Sbjct 18061 AGGTCGCCATGTTCTTTAACCATCAGACGCGCGCGATCCCTGTTGGTAAATGGGATTCCA 18002
Query 3580 TGGCTGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACACAGCGGCG 3639
|| ||| ||||| ||||| |||| ||| ||||||||||| || ||||||| ||
Sbjct 18001 TGCATGAGGACGATAAAGGGCTGTTTGTTCGCGGTCAACTCACGCCAGGACTTAGTCTGT 17942
Query 3640 CCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTGGCTTTT 3699
| | |||||||||||||||||| | ||||| || |||||||||||||| || || || |
Sbjct 17941 CTGAGGACCTGAAAGCGGCAATGAAACACGGCACCGTTGAAGGTATGTCAGTCGGTTTCT 17882
Query 3700 CCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATATCCAGG 3759
|||| || ||||| || || | | |||| |||||| || || ||
Sbjct 17881 CCGTCGGCCCCGATGATTATACAGTCGGCACTTCCGGCCTCATTTTCAAAAACATTTCTT 17822
Query 3760 CTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCGCAGCCA 3819
|||||| |||||||| |||||||||||||| |||||||| | ||||||| | | ||||
Sbjct 17821 ATCTGCGGGAAATCAGTGTCTGCACTTTCCCGGCCAACGAGCTGGCTGGCGTGACCGCCA 17762
Query 3820 TGAAAAGTGTCGATGGCATTGAAACGATTCGTGATGTGGAGAACTGGCTGAGGGATTCAG 3879
|||||||| |||| ||||| |||| |||||||| | ||| |||||||||||||||||
Sbjct 17761 TGAAAAGTATCGACGGCATCAAAACCATTCGTGACGCGGAAGCCTGGCTGAGGGATTCAG 17702
Query 3880 TCGG------CCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCAGCGA 3933
|||| || | | || | |||||| || |||||||| ||||||| ||
Sbjct 17701 TCGGTTTGACCCGCTCTGAAGCGCAGGCATTT------ATTGCCCGCGTTAAGTCCGCAG 17648
Query 3934 TTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCAGAGCA 3993
||||||||||||| ||| || | || |||| ||| ||| |||
Sbjct 17647 GCCGGAGCGAGTCCGGTAGCGGCG------------ACATTGACGCGCTGGCACAGCGCA 17600
Query 3994 TCAAATCTTTCCCTTCTAA-CTTAGG--TAAATAA---------TTATGTCTGAACTCG- 4040
| || || || | |||| || || | |||| |||||||||| | |
Sbjct 17599 TAAACTCATTTGCCGCTAATCTGCGGAATGCATAACGGAGCACCATATGTCTGAATTAGC 17540
Query 4041 CTCTCATTCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGC 4100
| ||| | ||||||| || || | ||||| | || | | | || ||||
Sbjct 17539 CACTC-TCGAAAAAGCGATTGAGAATTCCCAAAAAGAAGTTAAGGAACTCATCGA----- 17486
Query 4101 AGAA-AGCAGAAATCGA--AAGCACA--GGCCAGGTTTCCAAACAGTTGCAGTCCGACCT 4155
|||| ||| ||||| | || || | ||| | || || | ||||| |||| ||
Sbjct 17485 AGAACAGCGTAAATCCATCAATCAGAACGGCGAAATTAACACGAAACTGCAGGCCGATCT 17426
Query 4156 GATGAAAGTACAGGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAA 4215
|| |||| ||||||||||||| | ||||||||||||| |||||||| || || ||
Sbjct 17425 GACCAAAGCTCAGGAAGAGCTGAAGACCACCGGCACTCGCCTGTTCGATCTTGAGCAAAA 17366
Query 4216 ACTGGCATCCGGCGCTGAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGA 4275
||| || | | | ||| || | | || || || | || || | | ||
Sbjct 17365 ACTTGCTGGTAACTCACCGGATCAGACTGCGCAAAAGTCATTTGCCGAGCGCGTGTCCGA 17306
Query 4276 AGAGCTTATTAAGTCATGGGACGGTAAACAGGGCACCTTTG---GCGCTAAAACGTTTAA 4332
||| || || || ||||| || | ||||| | | || | ||| |
Sbjct 17305 AGACCTGATGAAAGGCTGGGATGGCTCCC---GCACCAAAGCGAAAGTTACCAGCTTTGA 17249
Query 4333 CAAGTCACTAGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCC 4392
|| | | || | ||| | || || || | ||| ||||||| ||| || ||
Sbjct 17248 TAAAGCGATCGGTTCCGGCGCAGCGTCAGCGGGTGCCCTGGTCCAGCCGCAGCAAATGCC 17189
Query 4393 AGGCATCATCATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCG 4452
||| || | |||||||| ||||| ||||| ||| ||||||| || ||||| || |||||
Sbjct 17188 AGGTATTCTGATGCCAGGGCTGCGTCGTCTGACCGTTCGTGACCTTCTGGCACAAGGCCG 17129
Query 4453 CACTTCCAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGT 4512
| | |||||||||| |||||||| |||||||| | ||||| ||| ||||| | |
Sbjct 17128 TATTACCAGTAACGCGCTGGAATACGTGCGTGAGAATGTGTTCACC---AACGCTGCTGC 17072
Query 4513 G---GTGGCAGAGAAAGCA--CTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACC 4567
| ||||| ||| ||| || ||||| ||| | |||||||||| |||| ||||
Sbjct 17071 GCCAGTGGC--GGAAGGCACCCTCAAGCCTGAAAGTAACATCACCTTCACCAAAGAAACG 17014
Query 4568 GCGAACGTGAAGACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCG 4627
||||||||||| |||||||| |||||| | ||||| || || ||| | ||||| |||||
Sbjct 17013 GCGAACGTGAAAACCATCGCCCACTGGATCCAGGCGTCGCGACAGATCATGGACGATGCT 16954
Query 4628 CCAATGCTTCAGTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAG 4687
|| ||| ||||||||||| ||| |||| | ||||| || ||||| ||| ||||||
Sbjct 16953 CCGGCGCTGCAGTCCTACATCAACTCCCGCATGATGTATGGGCTGGCGCTGGTGGAAGAA 16894
Query 4688 GGCCAGCTGCTGAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCA 4747
||| |||| ||||| || || || || ||||| ||| | || | ||| ||| ||
Sbjct 16893 AATCAGATGCTAAACGGTGATGGGACTGGCGATAATCTGCAGGGCATTAACGTAGTCGCG 16834
Query 4748 ACCGCCTATGACACCTCGTTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCAC 4807
| || |||||| ||| || | ||||| ||||| || || | |||||||| |||||||
Sbjct 16833 AACGACTATGAAACCGCGCTCAATGCTACCGGTGATACTGGTGCTGACATCCTCGCTCAT 16774
Query 4808 GCTATTTATCAGGTG------ACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAAC 4861
|| || ||||||||| | ||| | ||| |||| ||| || |||| |||
Sbjct 16773 GCGATCTATCAGGTGTCTCTCAGCGAATTTGA----AGCG--GACGGCATTATCCTTAAC 16720
Query 4862 CCGCGCGACTGGCACAACATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGT 4921
||| ||||||||| || || | |||| || | | ||| || ||| | ||
Sbjct 16719 CCGGCAGACTGGCACCGGATTGCTCTATTGAAGGATGCTAACGGCAATTACATCCTTGGC 16660
Query 4922 GGTCCTCAGGCATTCACCAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCG 4981
|| || ||||| || || || | ||||||| | || || ||| | || | |||
Sbjct 16659 GGGCCGCAGGCGTTTGCCTCCAAGGTGCTGTGGGGGCTTCCGGTTGTTTCTACCACGGCC 16600
Query 4982 CAGGCCGCCGGCACCTTTACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGC 5041
|| || | || ||||| || || || | || | | | || || ||||| ||||||||
Sbjct 16599 CAAGCATCAGGTACCTTCACTGTTGGAGCGTTTGGTCTTGCGTCTCAGGTATGGGATCGT 16540
Query 5042 ATGGATGCCACCGTGGAAGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTG 5101
||||||||||| | || | ||| | | || || || |||||||| ||||||||||||
Sbjct 16539 ATGGATGCCACTATCGAGATCAGCAATCAGGATCGAGACAACTTCGTTAAAAACATGCTG 16480
Query 5102 ACCATCCTGTGCGAAGAGCGTCTGGCGCTGGCACATTATCGCCC 5145
|||||||||||||||||||| |||| |||| |||||||| ||
Sbjct 16479 ACCATCCTGTGCGAAGAGCGCTTGGCATTGGCTCATTATCGTCC 16436
Score = 677 bits (750), Expect = 0.0
Identities = 1033/1453 (71%), Gaps = 49/1453 (3%)
Strand=Plus/Minus
Query 6931 CAGGACGACAACGTGGTCTATCCCTATGTGGTCTGGCAGAACATCACCGGTTCTCCAGAG 6990
||||| ||||| |||||||||||||||| || ||||||||||||| |||||| || |||
Sbjct 14646 CAGGATGACAATGTGGTCTATCCCTATGCCGTTTGGCAGAACATCAGCGGTTCACCTGAG 14587
Query 6991 AACTACATTGCCCAGCGCCCTGACGCAGACTTTTTCACGCTGCAGGTGGATGCATATGCC 7050
|||||| | | | | ||||| ||| | ||| | |||||||||||| |||| ||||||
Sbjct 14586 AACTACCTGGACAAACGCCCGGACACTGACAGCTACACGCTGCAGGTAGATGTGTATGCC 14527
Query 7051 GACACCGTGGATGAAGTGATTGCCGTGGCTACTGCGCTGCGGGATGCCATTGAGCCGCAC 7110
|| || || | | | ||||||| || |||||||| |||||||||||||| |||
Sbjct 14526 GATACGGTCGCGTCTGCTACATCCGTGGCAACAGCGCTGCGTGATGCCATTGAGCCACAC 14467
Query 7111 GCGCATATCACGCGCTGGGGCGGACAGGAAAGAGACCCCGAAACAAAGCGCTATCGCTAC 7170
|| | || || | |||||||| ||| | ||||| ||||||||||||||||||||
Sbjct 14466 GCCTACATTACCAGATGGGGCGGGCAGAGCCGCGACCCAGAAACAAAGCGCTATCGCTAT 14407
Query 7171 TCATTCGATGTTGACTGGATAGTCACTCGATAAACGT----ATTATTCAACC-ACCGGCC 7225
|||||||| ||||| |||||||| ||| ||| | | | |||||| |||||||
Sbjct 14406 TCATTCGACGTTGATTGGATAGTGCTTCGTTAACATTCCCAACTTTTCAACATACCGGCC 14347
Query 7226 TTGAGCCGGtttttttATGACCGGAGATAACAATGTCTGTATTGACGCAAGGTACGCAGC 7285
||| |||||||||||||||||||||||| || |||||||||||||| ||||| || |||
Sbjct 14346 TTGCGCCGGTTTTTTTATGACCGGAGATCACCATGTCTGTATTGACACAAGGCACCCAGT 14287
Query 7286 TCTTTGTGCTCGTAAAAGGCAAGGTGAGCGAAGTTGAATGTATCACTGCATTTTCACCCG 7345
| | ||| |||| || ||| || |||||||||||||| ||||| |||| | ||||
Sbjct 14286 TTTATGTCCTCGCCAACGGCGTTGTAAGCGAAGTTGAATGCATCACATCATTCACCCCCG 14227
Query 7346 GCAGCAATCCGGCTGACCAGATTGAAGACACCTGTCTTTCTGAACGCTTTGATCGCAGCT 7405
|| | || || ||||||||||| ||||| |||||| | || ||| |||| ||
Sbjct 14226 GCGGTAACCCTGCTGACCAGATCGAAGATACCTGTTTAAGCGAGCGCAACAGCCGCACCT 14167
Query 7406 ATAAGCGTGGTCTTCGAACGCCTGGCA-CAGCATCACTGACGCTTAACGCTGATCCTAAA 7464
|||| ||||| || || || |||| |||| | | ||||| || |||||||| |||
Sbjct 14166 ATAAAAAAGGTCTGCGCACACC-GGCATCAGCTACCGTCACGCTGAATGCTGATCCAAAA 14108
Query 7465 AATACCAGCCACATCATGCTCTACAACCTGTCCATTTCGGACGACGAAGAGGATCAGGAC 7524
|| |||||||| | ||||| | |||||| | || |||||||| ||||
Sbjct 14107 AACGCCAGCCACCTGATGCTGCATAACCTGGCAGAATCTGACGACGA-----ATCA-CTG 14054
Query 7525 CTGACCTTCGCGATTGGATGGTCAGACGGAACCGCATCGCCAACTGCGGCTGAAAATGGT 7584
|||||||| || |||| ||| |||| || || |||||||| || | ||||
Sbjct 14053 CTGACCTTTGCCGTTGGCTGGGCAGATGGTGAATCAGAACCAACTGCAGCAGCGCCTGGT 13994
Query 7585 GCATCCGGTGCAGTCGATGGCCTGGTGCTACCTGATAGCCGCACATGGTTCGTATTCAAA 7644
|| | || || |||||| || || | ||||| || || ||||| || ||| ||
Sbjct 13993 GCTCCAAACGCTGTAGATGGCTTGCTGTTGCCTGACGATCGTACCTGGTTTGTTTTCCAA 13934
Query 7645 GGCTATGTGTCCGACTTCCCGTTTGATTTTTCAGCAAACACGGTTGTTTCTACTTCTGCA 7704
||||| || |||| ||||| || ||||| |||||||| || || || | ||
Sbjct 13933 GGCTACGTTACCGATTTCCCATTCGATTTCCAGGCAAACACAGTGGTGAGCACGACCGCG 13874
Query 7705 TCTATCCAGCGCTCCGGCTCTGCTGTATGGGTGCCAAAAG-TCGTGACCCCA--TAA--A 7759
|||| ||||| || || || | || ||||| ||||| | || | | || ||| |
Sbjct 13873 ACTATTCAGCGTTCTGGTCCTTCCGTTTGGGTTCCAAAGGCTCAAGCCGGCAGCTAATCA 13814
Query 7760 AT--------CAGGGC----GGCAACGCCCTTATTAATCA-GGAT--TAA--TAATGAAA 7802
|| | |||| || ||| | | | ||| ||| ||| ||||||
Sbjct 13813 ATCTATCCGCCGGGGCCGAGTGCCCCGCGTTAACTTCTCATTGATGGTAACGACATGAAA 13754
Query 7803 TTAACACTTGATGCACTCAAGGAGTCCGGCGCGTTTACCGGTCGCCCGGTTGAGAAAGAA 7862
||||| || || | | || || ||||| ||||||||||||||||| |||||||||
Sbjct 13753 TTAACTCTGGAATCGTTGAAAGAACATGGCGCCTTTACCGGTCGCCCGGTAGAGAAAGAA 13694
Query 7863 ATCACCTGGACGCAAGGCGATaaaaaaaTCACCGCGACCGTGTATGTTCGCCCGATGGGT 7922
|||||||||| ||| ||||| ||| || | || || || |||| ||| || || |||||
Sbjct 13693 ATCACCTGGAAGCAGGGCGAGAAAGAACTGACGGCAACGGTGTTTGTACGGCCTTTGGGT 13634
Query 7923 TATCACACAGCAACGTCCGATGTGCTGGCTTTTGGTGGTAAGGTCGATGGTGTGGCAGGG 7982
|| |||| || || ||| | || || | ||||| || || ||||| || || ||
Sbjct 13633 TACTACACTGCGCGATCAGATATTCTCGCGGTAGGTGGAAAAGTTGATGGCGTTGCTGGT 13574
Query 7983 CGTATCGCCGCATCCATCTGCGATGAACATGGTAAACCCATCTTCACCCCGGCTGACATT 8042
|| ||||| || || || || ||||| |||| | || | || ||||| || || ||
Sbjct 13573 CGCATCGCAGCTTCTATTTGTGATGAGAATGGCCAGCCAGTATTTACCCCTGCAGATATC 13514
Query 8043 ACTGGTGAGGCAGATCCTGAACGTGGTGCACTGGATGGCGGCCTGACGGTAGCACTGCTT 8102
||||||||||| ||||| || |||||||| || ||||| | | || || || ||||
Sbjct 13513 ACTGGTGAGGCGGATCCGGATCGTGGTGCGCTTGATGGTGCTTTAACAGTGGCTTTGCTG 13454
Query 8103 CTGGCCATTCAGGAAGTTAACGATCTGGGAAAGACTTCGAGC--TCAGCGCCGAAGACGA 8160
|||||||||| || || || | ||||||||||| |||| ||||||| || |||||
Sbjct 13453 GTGGCCATTCAAGAGGTCAATAACCTGGGAAAGAC--GGAGCCATCAGCGCAGACGACGA 13396
Query 8161 ATTCTGGTGCGAGCTCGTCCTCAACGGAATCGGAGGCAGAACAATCGCCGAAGCGCGGGA 8220
| ||||||||| | ||||| || || || || ||||| ||| | || || || | |||
Sbjct 13395 AGCCTGGTGCGAATTAGTCCTGAATGGTATTGGCGGCAGGACAGTGGCAGAGGCTCAGGA 13336
Query 8221 AGTCCTCTCA----TTCAAAGAGTCCCAACTCTGGGCAAAGTACCGGGAACGA-TACGGG 8275
| ||||| ||| |||| | || ||| ||||| | | ||| | | ||
Sbjct 13335 --GCGTCTCAGCCTTTC--TGAGTTTCGCCTGTGGATGAAGTATC-GTAACAAGTTTGGC 13281
Query 8276 AGTCTGAACCCTATGTTGCGGGTTGAGTGGGGTGCCGGGCTGGTGAGCAGCATGATAGCC 8335
||||| ||||||||| ||||| |||||||||||||| ||||||| || | ||| ||
Sbjct 13280 AGTCTAAACCCTATGATGCGGACTGAGTGGGGTGCCGCGCTGGTGGCAAGTACGATCGCA 13221
Query 8336 AACGTTAACAGAG 8348
||||| || ||||
Sbjct 13220 AACGTCAATAGAG 13208
Score = 132 bits (146), Expect = 1e-26
Identities = 396/595 (67%), Gaps = 36/595 (6%)
Strand=Plus/Minus
Query 5747 GAGTGGATAAAAAAGTGGGCAAAAATAGCTTATGAACGAGCAACTGGTAAACGAACTGAT 5806
|| ||| |||| || ||| | || || ||||| ||||||| |||||||| ||||||
Sbjct 15786 GAATGGTTAAAGAACTGGTTGAGGATTGCCCATGAAAGAGCAACAGGTAAACGCACTGAT 15727
Query 5807 AGCAGTGATACGGGAACAAATCACAGCGCAGAGTGAGCAGACGGAAGCGATAAGCCGTCT 5866
||||| | | |||| | | | || || || ||||| | ||| ||| ||| ||
Sbjct 15726 AGCAGCACTGCAGGAAGAGACGAAGGCAAAGCAGGAACAGACAGCAGCACTAACCCGCCT 15667
Query 5867 GGCTGAATCAAATATGGCGCTTTGCGATGTCATT----ATCCAGTC-GC--TGGCTGGTG 5919
|||||| || ||| || | || ||| || || || || || || | | |
Sbjct 15666 GGCTGAGTCCAATGAATCGTTGGTCGCTGTTCTTGTTGATGCATTCAGCAATGACATGGG 15607
Query 5920 A-AC-TAGATG-------AAAC--TGCAGAGCAACAAACCTATCTGAGCGGTAAACCCAG 5968
| || | ||| |||| || ||||| |||| |||||| ||| || | |
Sbjct 15606 AGACGTTGATATCATTAAAAACGATG-AGAGC--CAAAACTATCTCAGC----AATC--G 15556
Query 5969 GGGGTAAC-ATGCAGGCCGGGAAATTGCGCCACAGGATTACTCTGCAGGAGCCAGTAAAA 6027
||||||| ||||||||||| || ||||||| | || || ||||| |||| || ||
Sbjct 15555 GGGGTAATTATGCAGGCCGGTAAGCTGCGCCATCGCATCACCTTGCAGAAGCCCGTTAAG 15496
Query 6028 GTGCAGAACCCGACAACGGGAGCCGTAATTAATACCTGGCGAGATGTTGCG--ACTGTCC 6085
|||||| | || ||| || | ||| |||| |||| ||| |||| ||| |
Sbjct 15495 GTGCAGGATCCTGAAACTGGTTCAGTAGAAAATATATGGCAGGATCTTGCTCAACTTT-- 15438
Query 6086 GGGCCGAAGTTTCACCATTGTCAGCGCGTGAATTTATTGCTGCGCAGGCTTCTCAGGGTG 6145
||||||| ||||| || | || || || || ||| | || || ||||| || ||
Sbjct 15437 GGGCCGAGGTTTCTCCGCTTTCTGCCCGAGAGTTTGTGGCCGCTCAGGCAATGCAAAATG 15378
Query 6146 AAATAACCACCCGTATTGTTATTCGCTACCGTGCCGGAGTTACCAG--AAAACATCGCAT 6203
| || || | ||| | | ||||||||| | || | | || |||| |||| ||
Sbjct 15377 CCGTCACTACAAGGATTACTGTCCGCTACCGT-CAAGACAT-CGAGCCAAAATATCGGAT 15320
Query 6204 CTTGTTTCGTGGTGCTGTGTATAACATCCATGGTGTTCTGCCCGATCCAAAAAGCGGACG 6263
|||||||| ||| | | ||||| | ||| || || ||||||| ||||| || |
Sbjct 15319 ATTGTTTCGCGGTAAAATATTCAACATTGAAGGTATTTTGTCCGATCCGAAAAGTGGTCT 15260
Query 6264 TGAATACCTGACGCTTCCCTGTTCTGAGGGTGTTAATGATGGCTGATAGTGTTGA 6318
|||||| |||||| | || ||||| || || ||| |||||||||||| | |||||
Sbjct 15259 TGAATATCTGACGTTGCCATGTTCGGAAGGGGTTGATGATGGCTGATGGCGTTGA 15205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130279471198656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |