Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_002166.1 Length=40751 Score E Sequences producing significant alignments: (Bits) Value seq477 1173 0.0 >seq477 Length=38297 Score = 1173 bits (1300), Expect = 0.0 Identities = 2060/2984 (69%), Gaps = 93/2984 (3%) Strand=Plus/Minus Query 2210 TTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCTGCGTGAGCCTGATTTCAA 2269 ||| ||||||||| | |||| || || || ||| ||| | || ||||| |||| Sbjct 19374 TTACCGATGAACGTAATATGCAGATCAGCACCGTTTGGTCTTGCATAAGACTGATATCAA 19315 Query 2270 CGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAACAGACCAGAATGACAACCGTAAAA 2329 | | || |||| | ||||| ||||| || ||||| | |||||| | ||| | | Sbjct 19314 CCGTGACAGCATCTCTCCCGCTAGATGTGTTTGAAACTGTT---AATGACCAACGTCAGA 19258 Query 2330 AAGT-GGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAATCAGTACATG 2388 |||| ||| || ||||| |||||||| || ||||| | | || ||| | | ||| Sbjct 19257 AAGTCGGAAACGAA-AATCCCCTGGCGCGCCTCCTGCGATTCCGTCCAAATAATTTTATG 19199 Query 2389 ACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGTAACGCATAT 2448 ||||| | ||||| | || || ||||| ||||| |||||| || || || || || Sbjct 19198 ACCGCGCTTGAATTTCGCGAAGCGATGACAATGCAACTCTGTGCATATGGGAATGCGTAC 19139 Query 2449 GCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTTCAGTCTGCC 2508 || | || || || || |||| ||||| ||||||||| | | ||| | | ||| Sbjct 19138 GCCCACGTTGAGCGAAATAGCGTTGGTGATGTGATCAGCATGGTTCCGTTAATGAGCGCC 19079 Query 2509 AATATGGATGTGAAGCTC-GT-----CGGaaaaaaaGTGGTTTATCGCTATCAACGCGAC 2562 |||||||||||| ||| || ||| ||||| || |||| |||||| |||| || Sbjct 19078 AATATGGATGTGCGACTCAGTGATAACGGCAAAAACGTTATTTACCGCTATAAACGAGAT 19019 Query 2563 AGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATTCACC 2622 | |||||||| ||||| || ||||| ||||| || || ||||| || || || | | Sbjct 19018 ACGGAATACGCAGACTTCAAGCCTAAAGAAATTTTCCATCTGAAAGGTTTTGGTTTTAAC 18959 Query 2623 GGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGT---AAATCGGCAGGTGTGGCAGTT 2679 || || || || ||||| || | || || | || |||||||| |||||||| | Sbjct 18958 GGTCTAGTGGGGCTGTCTCCGTTGGCCTT---CAGTGCGAAATCGGCCGGTGTGGCGATC 18902 Query 2680 GCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTC 2739 || ||||| ||| | ||||| || || ||||| || ||||||||||| |||||||| || Sbjct 18901 GCTATGGAAGACAATCAGCGCGAGTTTTTTGCTAATGGCGCCAAGTCACCGCAAATTCTG 18842 Query 2740 TCAACTGGCGAAAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAATTTCAAA 2799 || | | || ||||| ||| || | ||||| || | ||||| || ||||| Sbjct 18841 ATGACAGATGGCAAGGTGCTTACTAAAGATCAGCGTGGACAACTGGAAGAAAACTTCAAG 18782 Query 2800 GAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTCTACA 2859 ||||||||||||||||| || ||||| ||||| |||||||||||| || ||| | || Sbjct 18781 GAGATCGCCGGCGGCCCAGTTAAAAAGCGCCTTTGGATTCTGGAAAGTGGATTTACCACT 18722 Query 2860 TCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAGGTA 2919 ||| || || || |||| |||| | ||||| | | | || || ||||||||| Sbjct 18721 CAGGCTATAGGGATATCTCCAGCGGATTCTCAAATGCTTGAAGCGCGTAAGTTTCAGGTA 18662 Query 2920 AGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAATCA 2979 ||||||||||| || | ||| || ||||||||||| || || || ||||||||| || Sbjct 18661 GCCGAACTGGCGCGCTTTTATGGTGTCCCGCCTCACCTGGTAGGGGATGTCGAGAAAACA 18602 Query 2980 ACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTGCAG 3039 || ||||| || || || || || || ||||| ||||||||||||||| | | Sbjct 18601 ACTTCATGGGGTAGCGGTATTGAACAACAAAACCTCGGATTCCTGCAGTACACCTTAAAA 18542 Query 3040 CCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGATGTT 3099 || ||| | | |||||| |||| ||| |||| ||| | | | | ||| Sbjct 18541 CCTTATCTTGATCGCTGGGAATACAGTATTGAGCGCTGGTTGGTAAAAGATGCCGATCAG 18482 Query 3100 GGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATCCCGC 3159 ||| | |||||||||||||| || | ||||| || ||| | || |||||| || |||| Sbjct 18481 GGCAGGATTCATGCTGAGCATAATTTAGACGGTCTACTGCGCGGTGATTCGACAAGCCGC 18422 Query 3160 GCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCGACGA 3219 || | || ||| | |||||| | | || | |||||| ||||||| | | ||| Sbjct 18421 GCCTCTTTCATGCAAACAATGGTGAATACTGGTATTCGCACCGTCAACGAAGTCAGGCGA 18362 Query 3220 ACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATACGTG 3279 ||| ||| | || || | || || || ||||| || | ||||||||||| |||| Sbjct 18361 CTGGATAACTTGCCACCGCTTCCCGGCGGAGATGTAGCGACACGCCAGTCGCAGAACGTA 18302 Query 3280 CCGATCACCGATTTAGGAACCAACAAAGAGCCCCGTAATAACGGGGCTTAATTTTTATGG 3339 || || |||||| | |||| | |||||||||||| | | |||||||||||||||||||| Sbjct 18301 CCCATTACCGATCTCGGAAGAACCAAAGAGCCCCGCACTGACGGGGCTTAATTTTTATGG 18242 Query 3340 GGGCCGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCAAATTCA 3399 ||||| | |||||||| || ||||| ||| | |||||| |||||||||| || || | Sbjct 18241 GGGCCATGATGCCTGATATTCAGAAAACCCTGGCGTTCGACCAGACAGAAATAAAGTTTA 18182 Query 3400 CCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACACCGATT 3459 |||| |||||| | | || | |||||| ||||||||||| ||||| || || || || | Sbjct 18181 CCGGCGACGGTGATAAAGGCACTTTTGAGGGCTACGCCTCAGTTTTCAACAATACGGACT 18122 Query 3460 CCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAGACCCGAA 3519 |||| || ||||| || ||||| || || || | | | || || | ||||| Sbjct 18121 CCGACGGAGACATTATCCTGCCAGGTGCATTCAGCGGTGTTATTGCTGGTCAAAGCCGAA 18062 Query 3520 AAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGGGACAGCC 3579 | || || ||||| |||||||| |||| | | | || ||||| |||||||| | Sbjct 18061 AGGTCGCCATGTTCTTTAACCATCAGACGCGCGCGATCCCTGTTGGTAAATGGGATTCCA 18002 Query 3580 TGGCTGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACACAGCGGCG 3639 || ||| ||||| ||||| |||| ||| ||||||||||| || ||||||| || Sbjct 18001 TGCATGAGGACGATAAAGGGCTGTTTGTTCGCGGTCAACTCACGCCAGGACTTAGTCTGT 17942 Query 3640 CCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTGGCTTTT 3699 | | |||||||||||||||||| | ||||| || |||||||||||||| || || || | Sbjct 17941 CTGAGGACCTGAAAGCGGCAATGAAACACGGCACCGTTGAAGGTATGTCAGTCGGTTTCT 17882 Query 3700 CCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATATCCAGG 3759 |||| || ||||| || || | | |||| |||||| || || || Sbjct 17881 CCGTCGGCCCCGATGATTATACAGTCGGCACTTCCGGCCTCATTTTCAAAAACATTTCTT 17822 Query 3760 CTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCGCAGCCA 3819 |||||| |||||||| |||||||||||||| |||||||| | ||||||| | | |||| Sbjct 17821 ATCTGCGGGAAATCAGTGTCTGCACTTTCCCGGCCAACGAGCTGGCTGGCGTGACCGCCA 17762 Query 3820 TGAAAAGTGTCGATGGCATTGAAACGATTCGTGATGTGGAGAACTGGCTGAGGGATTCAG 3879 |||||||| |||| ||||| |||| |||||||| | ||| ||||||||||||||||| Sbjct 17761 TGAAAAGTATCGACGGCATCAAAACCATTCGTGACGCGGAAGCCTGGCTGAGGGATTCAG 17702 Query 3880 TCGG------CCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCAGCGA 3933 |||| || | | || | |||||| || |||||||| ||||||| || Sbjct 17701 TCGGTTTGACCCGCTCTGAAGCGCAGGCATTT------ATTGCCCGCGTTAAGTCCGCAG 17648 Query 3934 TTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCAGAGCA 3993 ||||||||||||| ||| || | || |||| ||| ||| ||| Sbjct 17647 GCCGGAGCGAGTCCGGTAGCGGCG------------ACATTGACGCGCTGGCACAGCGCA 17600 Query 3994 TCAAATCTTTCCCTTCTAA-CTTAGG--TAAATAA---------TTATGTCTGAACTCG- 4040 | || || || | |||| || || | |||| |||||||||| | | Sbjct 17599 TAAACTCATTTGCCGCTAATCTGCGGAATGCATAACGGAGCACCATATGTCTGAATTAGC 17540 Query 4041 CTCTCATTCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGC 4100 | ||| | ||||||| || || | ||||| | || | | | || |||| Sbjct 17539 CACTC-TCGAAAAAGCGATTGAGAATTCCCAAAAAGAAGTTAAGGAACTCATCGA----- 17486 Query 4101 AGAA-AGCAGAAATCGA--AAGCACA--GGCCAGGTTTCCAAACAGTTGCAGTCCGACCT 4155 |||| ||| ||||| | || || | ||| | || || | ||||| |||| || Sbjct 17485 AGAACAGCGTAAATCCATCAATCAGAACGGCGAAATTAACACGAAACTGCAGGCCGATCT 17426 Query 4156 GATGAAAGTACAGGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAA 4215 || |||| ||||||||||||| | ||||||||||||| |||||||| || || || Sbjct 17425 GACCAAAGCTCAGGAAGAGCTGAAGACCACCGGCACTCGCCTGTTCGATCTTGAGCAAAA 17366 Query 4216 ACTGGCATCCGGCGCTGAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGA 4275 ||| || | | | ||| || | | || || || | || || | | || Sbjct 17365 ACTTGCTGGTAACTCACCGGATCAGACTGCGCAAAAGTCATTTGCCGAGCGCGTGTCCGA 17306 Query 4276 AGAGCTTATTAAGTCATGGGACGGTAAACAGGGCACCTTTG---GCGCTAAAACGTTTAA 4332 ||| || || || ||||| || | ||||| | | || | ||| | Sbjct 17305 AGACCTGATGAAAGGCTGGGATGGCTCCC---GCACCAAAGCGAAAGTTACCAGCTTTGA 17249 Query 4333 CAAGTCACTAGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCC 4392 || | | || | ||| | || || || | ||| ||||||| ||| || || Sbjct 17248 TAAAGCGATCGGTTCCGGCGCAGCGTCAGCGGGTGCCCTGGTCCAGCCGCAGCAAATGCC 17189 Query 4393 AGGCATCATCATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCG 4452 ||| || | |||||||| ||||| ||||| ||| ||||||| || ||||| || ||||| Sbjct 17188 AGGTATTCTGATGCCAGGGCTGCGTCGTCTGACCGTTCGTGACCTTCTGGCACAAGGCCG 17129 Query 4453 CACTTCCAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGT 4512 | | |||||||||| |||||||| |||||||| | ||||| ||| ||||| | | Sbjct 17128 TATTACCAGTAACGCGCTGGAATACGTGCGTGAGAATGTGTTCACC---AACGCTGCTGC 17072 Query 4513 G---GTGGCAGAGAAAGCA--CTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACC 4567 | ||||| ||| ||| || ||||| ||| | |||||||||| |||| |||| Sbjct 17071 GCCAGTGGC--GGAAGGCACCCTCAAGCCTGAAAGTAACATCACCTTCACCAAAGAAACG 17014 Query 4568 GCGAACGTGAAGACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCG 4627 ||||||||||| |||||||| |||||| | ||||| || || ||| | ||||| ||||| Sbjct 17013 GCGAACGTGAAAACCATCGCCCACTGGATCCAGGCGTCGCGACAGATCATGGACGATGCT 16954 Query 4628 CCAATGCTTCAGTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAG 4687 || ||| ||||||||||| ||| |||| | ||||| || ||||| ||| |||||| Sbjct 16953 CCGGCGCTGCAGTCCTACATCAACTCCCGCATGATGTATGGGCTGGCGCTGGTGGAAGAA 16894 Query 4688 GGCCAGCTGCTGAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCA 4747 ||| |||| ||||| || || || || ||||| ||| | || | ||| ||| || Sbjct 16893 AATCAGATGCTAAACGGTGATGGGACTGGCGATAATCTGCAGGGCATTAACGTAGTCGCG 16834 Query 4748 ACCGCCTATGACACCTCGTTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCAC 4807 | || |||||| ||| || | ||||| ||||| || || | |||||||| ||||||| Sbjct 16833 AACGACTATGAAACCGCGCTCAATGCTACCGGTGATACTGGTGCTGACATCCTCGCTCAT 16774 Query 4808 GCTATTTATCAGGTG------ACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAAC 4861 || || ||||||||| | ||| | ||| |||| ||| || |||| ||| Sbjct 16773 GCGATCTATCAGGTGTCTCTCAGCGAATTTGA----AGCG--GACGGCATTATCCTTAAC 16720 Query 4862 CCGCGCGACTGGCACAACATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGT 4921 ||| ||||||||| || || | |||| || | | ||| || ||| | || Sbjct 16719 CCGGCAGACTGGCACCGGATTGCTCTATTGAAGGATGCTAACGGCAATTACATCCTTGGC 16660 Query 4922 GGTCCTCAGGCATTCACCAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCG 4981 || || ||||| || || || | ||||||| | || || ||| | || | ||| Sbjct 16659 GGGCCGCAGGCGTTTGCCTCCAAGGTGCTGTGGGGGCTTCCGGTTGTTTCTACCACGGCC 16600 Query 4982 CAGGCCGCCGGCACCTTTACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGC 5041 || || | || ||||| || || || | || | | | || || ||||| |||||||| Sbjct 16599 CAAGCATCAGGTACCTTCACTGTTGGAGCGTTTGGTCTTGCGTCTCAGGTATGGGATCGT 16540 Query 5042 ATGGATGCCACCGTGGAAGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTG 5101 ||||||||||| | || | ||| | | || || || |||||||| |||||||||||| Sbjct 16539 ATGGATGCCACTATCGAGATCAGCAATCAGGATCGAGACAACTTCGTTAAAAACATGCTG 16480 Query 5102 ACCATCCTGTGCGAAGAGCGTCTGGCGCTGGCACATTATCGCCC 5145 |||||||||||||||||||| |||| |||| |||||||| || Sbjct 16479 ACCATCCTGTGCGAAGAGCGCTTGGCATTGGCTCATTATCGTCC 16436 Score = 677 bits (750), Expect = 0.0 Identities = 1033/1453 (71%), Gaps = 49/1453 (3%) Strand=Plus/Minus Query 6931 CAGGACGACAACGTGGTCTATCCCTATGTGGTCTGGCAGAACATCACCGGTTCTCCAGAG 6990 ||||| ||||| |||||||||||||||| || ||||||||||||| |||||| || ||| Sbjct 14646 CAGGATGACAATGTGGTCTATCCCTATGCCGTTTGGCAGAACATCAGCGGTTCACCTGAG 14587 Query 6991 AACTACATTGCCCAGCGCCCTGACGCAGACTTTTTCACGCTGCAGGTGGATGCATATGCC 7050 |||||| | | | | ||||| ||| | ||| | |||||||||||| |||| |||||| Sbjct 14586 AACTACCTGGACAAACGCCCGGACACTGACAGCTACACGCTGCAGGTAGATGTGTATGCC 14527 Query 7051 GACACCGTGGATGAAGTGATTGCCGTGGCTACTGCGCTGCGGGATGCCATTGAGCCGCAC 7110 || || || | | | ||||||| || |||||||| |||||||||||||| ||| Sbjct 14526 GATACGGTCGCGTCTGCTACATCCGTGGCAACAGCGCTGCGTGATGCCATTGAGCCACAC 14467 Query 7111 GCGCATATCACGCGCTGGGGCGGACAGGAAAGAGACCCCGAAACAAAGCGCTATCGCTAC 7170 || | || || | |||||||| ||| | ||||| |||||||||||||||||||| Sbjct 14466 GCCTACATTACCAGATGGGGCGGGCAGAGCCGCGACCCAGAAACAAAGCGCTATCGCTAT 14407 Query 7171 TCATTCGATGTTGACTGGATAGTCACTCGATAAACGT----ATTATTCAACC-ACCGGCC 7225 |||||||| ||||| |||||||| ||| ||| | | | |||||| ||||||| Sbjct 14406 TCATTCGACGTTGATTGGATAGTGCTTCGTTAACATTCCCAACTTTTCAACATACCGGCC 14347 Query 7226 TTGAGCCGGtttttttATGACCGGAGATAACAATGTCTGTATTGACGCAAGGTACGCAGC 7285 ||| |||||||||||||||||||||||| || |||||||||||||| ||||| || ||| Sbjct 14346 TTGCGCCGGTTTTTTTATGACCGGAGATCACCATGTCTGTATTGACACAAGGCACCCAGT 14287 Query 7286 TCTTTGTGCTCGTAAAAGGCAAGGTGAGCGAAGTTGAATGTATCACTGCATTTTCACCCG 7345 | | ||| |||| || ||| || |||||||||||||| ||||| |||| | |||| Sbjct 14286 TTTATGTCCTCGCCAACGGCGTTGTAAGCGAAGTTGAATGCATCACATCATTCACCCCCG 14227 Query 7346 GCAGCAATCCGGCTGACCAGATTGAAGACACCTGTCTTTCTGAACGCTTTGATCGCAGCT 7405 || | || || ||||||||||| ||||| |||||| | || ||| |||| || Sbjct 14226 GCGGTAACCCTGCTGACCAGATCGAAGATACCTGTTTAAGCGAGCGCAACAGCCGCACCT 14167 Query 7406 ATAAGCGTGGTCTTCGAACGCCTGGCA-CAGCATCACTGACGCTTAACGCTGATCCTAAA 7464 |||| ||||| || || || |||| |||| | | ||||| || |||||||| ||| Sbjct 14166 ATAAAAAAGGTCTGCGCACACC-GGCATCAGCTACCGTCACGCTGAATGCTGATCCAAAA 14108 Query 7465 AATACCAGCCACATCATGCTCTACAACCTGTCCATTTCGGACGACGAAGAGGATCAGGAC 7524 || |||||||| | ||||| | |||||| | || |||||||| |||| Sbjct 14107 AACGCCAGCCACCTGATGCTGCATAACCTGGCAGAATCTGACGACGA-----ATCA-CTG 14054 Query 7525 CTGACCTTCGCGATTGGATGGTCAGACGGAACCGCATCGCCAACTGCGGCTGAAAATGGT 7584 |||||||| || |||| ||| |||| || || |||||||| || | |||| Sbjct 14053 CTGACCTTTGCCGTTGGCTGGGCAGATGGTGAATCAGAACCAACTGCAGCAGCGCCTGGT 13994 Query 7585 GCATCCGGTGCAGTCGATGGCCTGGTGCTACCTGATAGCCGCACATGGTTCGTATTCAAA 7644 || | || || |||||| || || | ||||| || || ||||| || ||| || Sbjct 13993 GCTCCAAACGCTGTAGATGGCTTGCTGTTGCCTGACGATCGTACCTGGTTTGTTTTCCAA 13934 Query 7645 GGCTATGTGTCCGACTTCCCGTTTGATTTTTCAGCAAACACGGTTGTTTCTACTTCTGCA 7704 ||||| || |||| ||||| || ||||| |||||||| || || || | || Sbjct 13933 GGCTACGTTACCGATTTCCCATTCGATTTCCAGGCAAACACAGTGGTGAGCACGACCGCG 13874 Query 7705 TCTATCCAGCGCTCCGGCTCTGCTGTATGGGTGCCAAAAG-TCGTGACCCCA--TAA--A 7759 |||| ||||| || || || | || ||||| ||||| | || | | || ||| | Sbjct 13873 ACTATTCAGCGTTCTGGTCCTTCCGTTTGGGTTCCAAAGGCTCAAGCCGGCAGCTAATCA 13814 Query 7760 AT--------CAGGGC----GGCAACGCCCTTATTAATCA-GGAT--TAA--TAATGAAA 7802 || | |||| || ||| | | | ||| ||| ||| |||||| Sbjct 13813 ATCTATCCGCCGGGGCCGAGTGCCCCGCGTTAACTTCTCATTGATGGTAACGACATGAAA 13754 Query 7803 TTAACACTTGATGCACTCAAGGAGTCCGGCGCGTTTACCGGTCGCCCGGTTGAGAAAGAA 7862 ||||| || || | | || || ||||| ||||||||||||||||| ||||||||| Sbjct 13753 TTAACTCTGGAATCGTTGAAAGAACATGGCGCCTTTACCGGTCGCCCGGTAGAGAAAGAA 13694 Query 7863 ATCACCTGGACGCAAGGCGATaaaaaaaTCACCGCGACCGTGTATGTTCGCCCGATGGGT 7922 |||||||||| ||| ||||| ||| || | || || || |||| ||| || || ||||| Sbjct 13693 ATCACCTGGAAGCAGGGCGAGAAAGAACTGACGGCAACGGTGTTTGTACGGCCTTTGGGT 13634 Query 7923 TATCACACAGCAACGTCCGATGTGCTGGCTTTTGGTGGTAAGGTCGATGGTGTGGCAGGG 7982 || |||| || || ||| | || || | ||||| || || ||||| || || || Sbjct 13633 TACTACACTGCGCGATCAGATATTCTCGCGGTAGGTGGAAAAGTTGATGGCGTTGCTGGT 13574 Query 7983 CGTATCGCCGCATCCATCTGCGATGAACATGGTAAACCCATCTTCACCCCGGCTGACATT 8042 || ||||| || || || || ||||| |||| | || | || ||||| || || || Sbjct 13573 CGCATCGCAGCTTCTATTTGTGATGAGAATGGCCAGCCAGTATTTACCCCTGCAGATATC 13514 Query 8043 ACTGGTGAGGCAGATCCTGAACGTGGTGCACTGGATGGCGGCCTGACGGTAGCACTGCTT 8102 ||||||||||| ||||| || |||||||| || ||||| | | || || || |||| Sbjct 13513 ACTGGTGAGGCGGATCCGGATCGTGGTGCGCTTGATGGTGCTTTAACAGTGGCTTTGCTG 13454 Query 8103 CTGGCCATTCAGGAAGTTAACGATCTGGGAAAGACTTCGAGC--TCAGCGCCGAAGACGA 8160 |||||||||| || || || | ||||||||||| |||| ||||||| || ||||| Sbjct 13453 GTGGCCATTCAAGAGGTCAATAACCTGGGAAAGAC--GGAGCCATCAGCGCAGACGACGA 13396 Query 8161 ATTCTGGTGCGAGCTCGTCCTCAACGGAATCGGAGGCAGAACAATCGCCGAAGCGCGGGA 8220 | ||||||||| | ||||| || || || || ||||| ||| | || || || | ||| Sbjct 13395 AGCCTGGTGCGAATTAGTCCTGAATGGTATTGGCGGCAGGACAGTGGCAGAGGCTCAGGA 13336 Query 8221 AGTCCTCTCA----TTCAAAGAGTCCCAACTCTGGGCAAAGTACCGGGAACGA-TACGGG 8275 | ||||| ||| |||| | || ||| ||||| | | ||| | | || Sbjct 13335 --GCGTCTCAGCCTTTC--TGAGTTTCGCCTGTGGATGAAGTATC-GTAACAAGTTTGGC 13281 Query 8276 AGTCTGAACCCTATGTTGCGGGTTGAGTGGGGTGCCGGGCTGGTGAGCAGCATGATAGCC 8335 ||||| ||||||||| ||||| |||||||||||||| ||||||| || | ||| || Sbjct 13280 AGTCTAAACCCTATGATGCGGACTGAGTGGGGTGCCGCGCTGGTGGCAAGTACGATCGCA 13221 Query 8336 AACGTTAACAGAG 8348 ||||| || |||| Sbjct 13220 AACGTCAATAGAG 13208 Score = 132 bits (146), Expect = 1e-26 Identities = 396/595 (67%), Gaps = 36/595 (6%) Strand=Plus/Minus Query 5747 GAGTGGATAAAAAAGTGGGCAAAAATAGCTTATGAACGAGCAACTGGTAAACGAACTGAT 5806 || ||| |||| || ||| | || || ||||| ||||||| |||||||| |||||| Sbjct 15786 GAATGGTTAAAGAACTGGTTGAGGATTGCCCATGAAAGAGCAACAGGTAAACGCACTGAT 15727 Query 5807 AGCAGTGATACGGGAACAAATCACAGCGCAGAGTGAGCAGACGGAAGCGATAAGCCGTCT 5866 ||||| | | |||| | | | || || || ||||| | ||| ||| ||| || Sbjct 15726 AGCAGCACTGCAGGAAGAGACGAAGGCAAAGCAGGAACAGACAGCAGCACTAACCCGCCT 15667 Query 5867 GGCTGAATCAAATATGGCGCTTTGCGATGTCATT----ATCCAGTC-GC--TGGCTGGTG 5919 |||||| || ||| || | || ||| || || || || || || | | | Sbjct 15666 GGCTGAGTCCAATGAATCGTTGGTCGCTGTTCTTGTTGATGCATTCAGCAATGACATGGG 15607 Query 5920 A-AC-TAGATG-------AAAC--TGCAGAGCAACAAACCTATCTGAGCGGTAAACCCAG 5968 | || | ||| |||| || ||||| |||| |||||| ||| || | | Sbjct 15606 AGACGTTGATATCATTAAAAACGATG-AGAGC--CAAAACTATCTCAGC----AATC--G 15556 Query 5969 GGGGTAAC-ATGCAGGCCGGGAAATTGCGCCACAGGATTACTCTGCAGGAGCCAGTAAAA 6027 ||||||| ||||||||||| || ||||||| | || || ||||| |||| || || Sbjct 15555 GGGGTAATTATGCAGGCCGGTAAGCTGCGCCATCGCATCACCTTGCAGAAGCCCGTTAAG 15496 Query 6028 GTGCAGAACCCGACAACGGGAGCCGTAATTAATACCTGGCGAGATGTTGCG--ACTGTCC 6085 |||||| | || ||| || | ||| |||| |||| ||| |||| ||| | Sbjct 15495 GTGCAGGATCCTGAAACTGGTTCAGTAGAAAATATATGGCAGGATCTTGCTCAACTTT-- 15438 Query 6086 GGGCCGAAGTTTCACCATTGTCAGCGCGTGAATTTATTGCTGCGCAGGCTTCTCAGGGTG 6145 ||||||| ||||| || | || || || || ||| | || || ||||| || || Sbjct 15437 GGGCCGAGGTTTCTCCGCTTTCTGCCCGAGAGTTTGTGGCCGCTCAGGCAATGCAAAATG 15378 Query 6146 AAATAACCACCCGTATTGTTATTCGCTACCGTGCCGGAGTTACCAG--AAAACATCGCAT 6203 | || || | ||| | | ||||||||| | || | | || |||| |||| || Sbjct 15377 CCGTCACTACAAGGATTACTGTCCGCTACCGT-CAAGACAT-CGAGCCAAAATATCGGAT 15320 Query 6204 CTTGTTTCGTGGTGCTGTGTATAACATCCATGGTGTTCTGCCCGATCCAAAAAGCGGACG 6263 |||||||| ||| | | ||||| | ||| || || ||||||| ||||| || | Sbjct 15319 ATTGTTTCGCGGTAAAATATTCAACATTGAAGGTATTTTGTCCGATCCGAAAAGTGGTCT 15260 Query 6264 TGAATACCTGACGCTTCCCTGTTCTGAGGGTGTTAATGATGGCTGATAGTGTTGA 6318 |||||| |||||| | || ||||| || || ||| |||||||||||| | ||||| Sbjct 15259 TGAATATCTGACGTTGCCATGTTCGGAAGGGGTTGATGATGGCTGATGGCGTTGA 15205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130279471198656