Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=46747018 Score = 89.7 bits (98), Expect = 4e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATTGTC 20459 ||||| | |||||||| || ||| | ||| || ||||||||||| ||| || | || Sbjct 3084182 ATGGCACTTCCTCCATGCCACATGTT-TGCTCAGTTTTACGTTGCCAATGGAGAGCTTTC 3084240 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 |||||||||||||| || || ||||||||||| || ||||| || || || ||||| Sbjct 3084241 ATGTCAAATGTATCAGCGCTCAGCTGATATGGGTCTTGGTGTACCGTTTAACATTGCCTC 3084300 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGT 20552 || | || ||||| | ||| | || ||||| Sbjct 3084301 ATACTCCCTTCTTACATGTATCCTCGCTCATGT 3084333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399177305684320