Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq82 102 2e-17 >seq82 Length=657493 Score = 102 bits (112), Expect = 2e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 17157 CGGCCCTTTAGCTAAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAA 17216 ||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||| Sbjct 216771 CGGCCCTTTAGCTCAGTGGTAAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAA 216830 Query 17217 TCCAGCAAGGGCCA 17230 ||||||| |||||| Sbjct 216831 TCCAGCAGGGGCCA 216844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136116175825344