Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_004682.1 Length=50913 Score E Sequences producing significant alignments: (Bits) Value seq18 446 5e-121 seq8 376 8e-100 seq9 295 2e-75 seq1 185 3e-42 >seq18 Length=36757632 Score = 446 bits (494), Expect = 5e-121 Identities = 636/899 (71%), Gaps = 71/899 (8%) Strand=Plus/Plus Query 34397 CATCGACAACCGAACTCGACGGATGAAGTACCGCGAGAAGATCGGGTGAATCCCCTCGGA 34456 || ||| ||||| | || |||||||||||||| |||||||||||||| || ||||| Sbjct 22717068 CACCGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACT 22717127 Query 34457 GACACCCGGCATCTTGGCGATGGTCCCCGTGGGTGCCACCGTCCTCTTCTTCACCGGCAC 34516 ||| || |||||||| ||||||||||| || || |||||||| | |||||| |||||||| Sbjct 22717128 GACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCAC 22717187 Query 34517 CGGGATGCGGAGCTGGTGTGCGAACTGCGTAGCAGCGTGGTCGACCTCTTCGGCCAGACT 34576 |||||| || | || || ||||| | || || ||||||||| |||||| Sbjct 22717188 CGGGATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTC 22717247 Query 34577 CCGCAGGAGCCACTTGAACTCCTCGTTCGTCCGGG--CCTCGGAGTACTTCCATCCGCAC 34634 ||||| || ||||| || || |||||| ||| || ||| | | || | Sbjct 22717248 CCGCAAGAAAGCGGTGAACCGCTTGTC--TCCGGGTGCCTGCGAATACCTACGGCCTGTC 22717305 Query 34635 AGCGCCAGGAACGACGCCACGCCGAGGTGGCCCACGCCGATGCGCCGGTTGCGATCCAGC 34694 || |||| | || ||||| |||||||| || || ||||||||||||||||||||||| Sbjct 22717306 AGGGCCAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGA 22717365 Query 34695 ACCTCGCGTGACTTCGGGTCTGCCACAGGCGAGAACGTCGCCCGCATCAGGAACCGAGTC 34754 ||||| || |||||| || || || | |||||||||||||| ||||||||||| ||| Sbjct 22717366 ACCTCTCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTC 22717425 Query 34755 ACCAGCCGGTGCGCCCGGTAGAGCCCCGTGATGTCGTAGCTGCCGTTGCCGTGCGCGAAC 34814 | ||| ||||| || ||| || | || |||| | ||| | || ||||| Sbjct 22717426 ATCAGACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGGCGTCGGTGACGAAC 22717485 Query 34815 GCCGCCAGGTTGACGTGGCCCAGGTTGCACGGCTCCCACGGTTCGAGCGTGATCTCACCG 34874 ||||| ||||||| ||| || |||||||| ||||||||||| || ||||||||||| ||| Sbjct 22717486 GCCGCGAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCCG 22717545 Query 34875 CAGGGGTTCGTGCAGACGACCTCGTTGGGCTCCCCGACGTTGGACAGCGACGAGTTCCAG 34934 || ||||| ||||||||||||||||||||||| |||||||||||||| || ||| Sbjct 22717546 CACGGGTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCAC 22717605 Query 34935 AACCCCGGCTCGCCGTTGGCGACCATCCCCTCGG---------TCAGTTCCCGGAG---- 34981 | |||||||||||||||| || ||||||| |||| ||||| | Sbjct 22717606 ATCCCCGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGCC 22717665 Query 34982 -----GATGC---GGTTGTTCGGG-CCAGCCCAGCCTTCCTCCACGGCCACCCAGAACTC 35032 | || ||||| |||| | | |||||| ||| ||| ||||||| | Sbjct 22717666 TTCGTGGAGCGCGGGTTGAGCGGGTCGACAGGAGCCTT-GGCCA-GGC--TCCAGAACGC 22717721 Query 35033 GTCATCGACCTCCAGCGAGATGTTGGTCGTCCAGTG------GCTG-------------- 35072 || || ||||| | ||||||||| || |||||||| |||| Sbjct 22717722 ATCGTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATGTT 22717781 Query 35073 -----------CCAG----------TGTCCTGCTTGATCCGCAGGAACTCGTAGACCTGC 35111 |||| ||||||||||||| |||| | | ||||| Sbjct 22717782 GGTGAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCTGC 22717841 Query 35112 GGGTCCTTCCAGTGCATCATCGACATCCGCGCTGACCGGCGCACACCGCCGGCCACCACG 35171 |||| |||||||||||||| ||| || || |||||||| ||||| ||||||||||| Sbjct 22717842 CAGTCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCACA 22717901 Query 35172 CACTGCGCGATGGCGTGGTCGATCTCCATCGCCGCGATACCGGTGAGCTGTCCACCCTC 35230 |||||||||||||||||||||||||||||||| ||| |||||| ||| ||||| || Sbjct 22717902 CACTGCGCGATGGCGTGGTCGATCTCCATCGCATCGAGACCGGTCAGCGCACCACCTTC 22717960 Score = 387 bits (428), Expect = 4e-103 Identities = 319/388 (82%), Gaps = 3/388 (1%) Strand=Plus/Plus Query 48559 GAGAAGAGCACCGACTTGCGTCCGTTGATGCAGAGCCCGCAGCGAGCGCAGGCTGAACCC 48618 ||||| || || |||||||||||||||||| || ||||| | ||||||||| || ||| Sbjct 22719949 GAGAACAGAACGCTCTTGCGTCCGTTGATGCACAGACCGCACCTAGCGCAGGCCGATCCC 22720008 Query 48619 TTGTCGCTGATCAGCTCGATGGCTTTGTTGTTC---TCCGGGCACCGCGTGGCGTTCGGG 48675 ||| || ||||||| |||| | || ||||||| |||||||| ||| ||| ||||| Sbjct 22720009 TTGGCGTTGATCAGGTCGAAGTCTCGGTTGTTCAGCTCCGGGCAGCGCACGGCCGTCGGG 22720068 Query 48676 AACTGCGCCTTGCCTTCTGCGAAGGTCTGGTCGACGTAGGCGATGTTGATGCCCTTGCCT 48735 ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 22720069 AACTGTGCCTTGCCTTCGGCGAACGTCGTGTCGACGTAGGCGATGTTGATGCCCTTGCCT 22720128 Query 48736 TCGAGGAACCGTGCGACCTCGATGTTGTCTCGATCCGCGCTGAAGTAGAGCGCGAGGTTC 48795 || |||||||| || || || | |||||| |||||||||||||||| |||| |||||| Sbjct 22720129 TCCAGGAACCGGGCCACGTCTACGTTGTCGGGATCCGCGCTGAAGTACAGCGACAGGTTC 22720188 Query 48796 GACAGCTTCTGCGCGTGCAGGAACACGGCTGCCGTCTGAACCCTTGTGTATGCCCAGAAC 48855 ||||||||||| | ||||||| | || ||||| ||||||||||| ||||| ||||||||| Sbjct 22720189 GACAGCTTCTGTGAGTGCAGGTAGACCGCTGCGGTCTGAACCCTGGTGTAGGCCCAGAAC 22720248 Query 48856 TGCACGTCCGGGTTGCCGGCGATGACTTTCGCCCAGGCGGTGACGTACGTCGGGCTGAAG 48915 |||||||| | | | |||||| |||||| || | |||||| |||||||||||| Sbjct 22720249 TGCACGTCGCTGAAGTCTCGGATGACACGCGCCCACGCTGCGACGTAGGTCGGGCTGAAG 22720308 Query 48916 AAGTCTCCGTCCCAGTGGATGCGGAACA 48943 ||||| || ||||||||||| ||||||| Sbjct 22720309 AAGTCGCCATCCCAGTGGATACGGAACA 22720336 Score = 295 bits (326), Expect = 2e-75 Identities = 534/767 (70%), Gaps = 22/767 (3%) Strand=Plus/Plus Query 43293 GTAGCTCACGTCGCAAAAAGCGCACTTGTCCGGCTCTGGGTCCGGGTCAAAGCGCTCGGC 43352 |||| ||| || || || ||| |||||||| || || |||||| || | ||| Sbjct 22718031 GTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAACATCGAGGC 22718090 Query 43353 GGCGATGTTCTCTTCCAGTTCGCGGAACTTCTCCGCGACCCTCTCGCGGGGCCACTCCCC 43412 ||||| || || | | |||||| ||| | || || || | ||||| | Sbjct 22718091 TGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGT 22718150 Query 43413 CAAGTCGTAGGGGTACGTCGGCTTGC---CCTTCACGCCTTTCTTCCCGGCCATGTAGTA 43469 || ||||||||| | |||||||| |||| ||| |||||||| ||||| |||| Sbjct 22718151 CAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTT---GCCCTTCTTCCCCACCATGAAGTA 22718207 Query 43470 GTCCCCGATCTGCGGGGGCTCGATGCCGTAGGTCTCGGCCAGGGCAA-CGCTGTAGACGC 43528 ||| ||| ||| ||| | ||||| ||||||||| || | || | ||| ||| |||| Sbjct 22718208 GTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCGC-GTACACGC 22718266 Query 43529 CAAGCTGGAAGTCGTCACCGGGGGTGTTGCCGGTCTTGTAGTCCCGGACGATCACGTTGC 43588 | ||||||||||||||||| || ||| |||||||||||||||||||| | | | Sbjct 22718267 CGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCC 22718326 Query 43589 CGTCGCTGTCCCTCAGCACGGTGTCGATGTAGCCCCGGACCAAGACTCCGTCGAGGTCGA 43648 |||| | || | |||| ||||||||| || || |||| || |||||||| |||| Sbjct 22718327 CGTC---GACCACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTCGAGCTCGA 22718383 Query 43649 TGTCGAAACCCAGCTCGATGCCTGGGGTGCCGTCAGGGGCGATCCAGATGACCTCTTCGG 43708 | ||||| ||||||||| |||| || ||||| |||| | |||||| ||| | | Sbjct 22718384 TCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTCCTGGCCCG 22718443 Query 43709 GGTGGCCTTCGGTCCAGGCGAAGAACTTCTCGATCTGTTCGAGCCCGATGTGCCAACGGC 43768 | | || | | ||| |||||||||||||||| ||| || || |||| | | |||| Sbjct 22718444 G--AGTCTCCCG-CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGTGTACCGGC 22718500 Query 43769 GTTCGAGATCGCTCGCGCCGTCGTAGCGGCCCGACCGGAACCACCAGTCGAAGTTCGGGG 43828 | |||| || | | |||| ||| | || |||| |||||| ||||||||||||| Sbjct 22718501 GCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACTCGAAGTTCGGGG 22718560 Query 43829 TCACGTCGGTGTACTGCGAC-ACCTCTTTGGCGTACTCCTCCTTGAACATCTCCTGGGCC 43887 || | |||||| | || | || || |||||||| | | |||||| |||| |||| Sbjct 22718561 TCTCCTCGGTG-AAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATGTCCTTGGCC 22718619 Query 43888 TCTTCAAGGCTCATTGGATCACCGTCGAGTTCCC--GCCTGCGGTACTCCTCCAGGACGG 43945 || ||||| ||| || |||| | |||| ||| | | |||| ||| | Sbjct 22718620 TCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCT--CGACCGCCTCAGCGACAG 22718677 Query 43946 TGTGGACTGCGCTCCCCTGCGGGAGCCAGGCGGCTGGCCTCTGCCATACCTTGTCGACGC 44005 ||||| || |||||||||| |||||||| ||||||| |||||| |||||||||| | Sbjct 22718678 CGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTTGTCGATCC 22718737 Query 44006 GGGCCAGCTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGAGCTG 44051 | || |||||||| || | |||||| | |||||| |||| ||| Sbjct 22718738 GAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGATCTG 22718783 >seq8 Length=24646021 Score = 376 bits (416), Expect = 8e-100 Identities = 635/919 (69%), Gaps = 48/919 (5%) Strand=Plus/Minus Query 11686 GGCCTTCCTGACTCCCGAGCAGAGCCAGGACTACTTCGCGGAGATCGAGAAGACCTCGAT 11745 || || |||| ||||||||| |||| |||||||| ||| ||||||||||||||| Sbjct 19507252 GGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACCTCGAT 19507193 Query 11746 TGTCCAGCGGATCGCCCGCAAGGTCCCGATGGGTCCGACCGGCATCAGCATCCCCCACTG 11805 ||||||| | |||||| ||||| ||||||||| | || ||| | ||||| ||||| Sbjct 19507192 CGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCGCACTG 19507133 Query 11806 GACCGGTGCCGTCTCGGCGTCGTGGACCGGCGAGGCCGAGCGCAAGCCGATCACCAAGGG 11865 | ||| | ||| || ||||| ||| |||| || ||||| ||||||||||| Sbjct 19507132 GGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACCAAGGG 19507073 Query 11866 TTCGTTCGGCAAGCAGGAACTGGAGCCGGTGAAGATCACCACGATCTTCGCAGAGAGCGC 11925 | |||| | | ||| |||||| | |||||||||| | | || Sbjct 19507072 CAACATGACTTCGCAGACCATCGCGCCCCACAAGATCGCGACGATCTTCGTGGCGTCTGC 19507013 Query 11926 TGAAGTCGTGCGTCTCAACCCGCTCAACTACCTGAACACCATGCGGACCAAGATCGCCGA 11985 || ||| ||| |||||| |||||||||| |||||||| |||||| | || Sbjct 19507012 GGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTGGCGAC 19506953 Query 11986 GGCCATCGCGCTCAAGTTCGACGCGGCTGCCATCCACGGCATCGACAAGCCGTCTGCGTT 12045 ||| ||||| | |||||||| || || || ||||||| ||||| ||| |||| Sbjct 19506952 CGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGACA-GCC-----CGTT 19506899 Query 12046 CAAGGGCTACCTGGCCGAGACGACCAAGGTCGTGTCGCTGGCCGACACCAACCTGACCAC 12105 | | |||| | | |||| ||||||| | | ||| | || ||||||| | |||| Sbjct 19506898 CCCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACCACCGGTGCCAC 19506839 Query 12106 GGCGTCGGGTCCGCAGGGCAACGCCTACCTGGCGGTCAACAACGCCCTGTCGCTCCTGGT 12165 | | || || || ||| || || | |||| |||| || ||||| Sbjct 19506838 GAC--CGTGTACG-------------ACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGT 19506794 Query 12166 GAACAGCGGCAAGAAGTGGACCGGCACCCTGCTGGACAACGTCACCGAGCCGATCCTCAA 12225 |||| |||||||||||||||| |||||| |||||| || |||||||||||||||| || Sbjct 19506793 GAACGACGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAA 19506734 Query 12226 CACGGCGGTCGACGGCAACGGTCGTCCTCTGTTCGTGGAGTCGACCTACACCGAGCAGGT 12285 | ||| ||| |||||||| || |||||| | |||||||||||| ||| | Sbjct 19506733 CGGCGCGAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAGGCCGC 19506674 Query 12286 CGGCGCGATCCGTGAGGGCCGCATCCTGGGTCGTCCCACCTACGTCGCGGACAACGTGGT 12345 || || ||||| |||||| ||| | | ||||| ||| | || ||| |||| || Sbjct 19506673 GAGCCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGT 19506614 Query 12346 CAACGGCACCGTTGGCAACCGCGTGGTCGGCGTCATGGGCGACTTCAGCCAGGTCATCTG 12405 | |||||| || ||||||| ||||||| |||||| |||| ||||||| Sbjct 19506613 GGAGGGCACC-------AC-----GGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTG 19506566 Query 12406 GGGCCAGATCGGCGGTCTGTCCTTCGACGTGACCGACCAGGCCACCCTGGACTTCGGTGA 12465 ||||||||||||||||||||||||||||||||| || ||||| |||||| || Sbjct 19506565 GGGCCAGATCGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAAC-------- 19506514 Query 12466 GGAACAGGGCGGCGTGTGGGTGCCC-AAGCTGATCTCGCTGTGGCAGCACAACATGGTCG 12524 | |||| ||| | | |||| || | |||||||||||||||||||| | |||| Sbjct 19506513 ----CTGGGCACCGT-CGAGAGCCCGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCG 19506459 Query 12525 CTGTCCGTTGCGAAGCTGAGTTCGCGTTCATGGTCAACGACAAGGACGCGTTCGTGAAGC 12584 | |||||| ||| ||||||| ||||||| ||||||| || |||||||| | Sbjct 19506458 CAGTCCGTGTCGAGGCTGAGTACGCGTTCCACTGCAACGACGCCGAGGCGTTCGTCGCTC 19506399 Query 12585 TGACCGACCAGGTC-GCGG 12602 ||||| || |||| |||| Sbjct 19506398 TGACCAACGTGGTCAGCGG 19506380 Score = 316 bits (350), Expect = 7e-82 Identities = 529/756 (70%), Gaps = 39/756 (5%) Strand=Plus/Minus Query 10379 CGGACCTTCTACGACGCTCAACGCGCACTCCACCACCCGGAGCTGGACCCCAACGAGAGG 10438 ||||| ||||||||| | || ||| |||||||||||||||||| || |||||||||| Sbjct 19508613 CGGAC-TTCTACGACTCCCAGCGCAGACTCCACCACCCGGAGCTTCCCCGCAACGAGAGG 19508555 Query 10439 TTGCTGTCCGAGCTTCGGTTCGAGTGGTTCGTGCAGAACATGGAGCCCGCACGCGTCAAG 10498 |||| | ||| || | || ||||||||||| |||||||||||||||||| | Sbjct 19508554 TTGCGGAGCGACCTCCAGTGGGAGTGGTTCGTCAGGAACATGGAGCCCGCACGAAAGGGG 19508495 Query 10499 TTCTCCCAGGAGGAGGCCGGTGACGCAGGCGTGGCCCAGGTCGCGCTA-CGAGCAGTGCG 10557 || || |||| || | | | || | || || || | | | ||| ||||||| Sbjct 19508494 TTGTCGCAGGCCGACTCTCCTCAAGCTGCGGTCACCAAGCTGACCTTGGCGA-CAGTGCG 19508436 Query 10558 CGAAGTCGAGATGGCAGGACGCCGACAGATCATCGGGGCGGTCAAAGACGACCCCGCTCC 10617 |||||| ||||||||||| ||||||||||||||||| || ||||| ||||||| ||||| Sbjct 19508435 CGAAGTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACCCAGCTCC 19508376 Query 10618 CCGCATCATTCGCGGGTGGGCGCGAGTGGCCACTGGTCGAGAGACCTGTGCCTGGTGCCT 10677 | ||| | || |||||| | || ||||| || || || || || |||||||| || Sbjct 19508375 TCAGATCGTGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCT 19508316 Query 10678 GATGCTCATCTCCCGAGGGCCTGTGTACCTCGGGGCCACCAACGCCGGCCTAGACCTCGA 10737 |||||| || ||||| || || | |||||| ||| | || || || ||||||| Sbjct 19508315 GATGCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGA 19508256 Query 10738 TGACGACTCGGCAGCCGAGAT---GATCGCTGCTGGT---------GAGGATGTCAGCGA 10785 ||| | | | ||| | || || ||||| ||| | || |||| Sbjct 19508255 CACCGAGACCGTGGTCGACCTCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTCCGCGA 19508196 Query 10786 GTA------------CATGGAGCAGTGGCACGCCGGGTGCGACTGCAAAGTGGTGCCGGT 10833 | ||| ||| |||||||||| |||||||||||| |||||||| || Sbjct 19508195 AGAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGT 19508136 Query 10834 CTTCAAGGTGGACGACTGGCCCGGTTTGGAAGCCCAGAAGCGGGCTCTCCGGTTGTGGAT 10893 |||| | ||||| |||||||||| || || ||| | || ||||| | | | ||||| Sbjct 19508135 CTTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGAT 19508076 Query 10894 CGACGCAGGACGCGAAGCGTCCCGGTTGATCGAGTCGGGCAAGGCCCGGACCAACAACAT 10953 |||||| || ||||| || | | || | || ||||||||||| |||| ||| Sbjct 19508075 CGACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGA 19508016 Query 10954 GAACAAGGAGACGCAGAACGCGCTCCGTCGTCGCCTCGAACGGGGCGAAGTTCGC-ATGT 11012 ||||||||||||| ||||| |||||||| ||| | | || |||| ||||||| |||| Sbjct 19508015 GAACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCG-AGTTCGCAATGT 19507957 Query 11013 CCGAATTCGCTGCTGCTGCAGCGTAGTTCATCCCATCCAAGCCCCCAGGTGGGGCTGTCA 11072 |||| | ||| || || ||||| ||||| || | ||||||||||| ||| Sbjct 19507956 CCGACTACGC-ACT--CGCTGCGTA----ATCCC--CCGA-ACCCCAGGTGGGTTCATCA 19507907 Query 11073 CCTATGCCCAGGAGGCAATCCAACATGTCCGATACC 11108 | ||||||||||||| | |||||||||| ||| Sbjct 19507906 ACCATGCCCAGGAGGCGAAAACACATGTCCGACACC 19507871 Score = 114 bits (126), Expect = 4e-21 Identities = 201/288 (70%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 12983 GTCGAGCGGATGATCAAGCGGCGCATCCCGGACCTGGCCACCAAGGTCACCGACCCGGAC 13042 |||||||| |||||| ||| || ||||| || |||| | ||| ||| | ||||| Sbjct 19506045 GTCGAGCGCATGATCCGGCGTCGGATCCCAGATCTGGACGCCAGGGTGTCTT---CGGAC 19505989 Query 13043 TACCTC---GAAGACCTCAAGCAGGTCGAAGCGGATGCCGTTCTGCGGCTTGTCCGTAAC 13099 | || | || || | | |||| || || || || ||||| || || |||||| Sbjct 19505988 ATCTTCCGGGCCGATCTGATCGACATCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAAC 19505929 Query 13100 CCCGAGGGCTACCTGTCGGAGACCGACGGCAACTACACGTACATGCTCCGGTCTGACCTC 13159 || ||||||||||| |||||||||||||| ||||| ||| ||||| | |||| || Sbjct 19505928 CCGGAGGGCTACCTCTCGGAGACCGACGGGGCGTACACCTACCAGCTCCAGGCTGATCTG 19505869 Query 13160 GC-CAGCGGGAAGCTGGAGATCTTCCCCGAGGAGTGGGAGATCCTGGG---CTACCGCAG 13215 | ||| || ||||| | ||| | ||| |||||| || | |||| | |||| Sbjct 19505868 TCTCAG-GGCAAGCTCGTCATCCTTGGCGAAGAGTGGACGACCTTGGGAGTCAACCGACT 19505810 Query 13216 ATCTCGCATGACGGTGATCGTCCCGAATCCGGTGATGCCGACATGAGC 13263 || |||||| | ||||||||||| ||||||||||||||||| Sbjct 19505809 CTCGCGCATGTCCACCATCGTCCCGAACATCGTGATGCCGACATGAGC 19505762 Score = 86.0 bits (94), Expect = 2e-12 Identities = 118/166 (71%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 13388 GATGAGCCTTCTCGATGGCGGTCCCGCCTACGAGGACGTGATCGTCTACCCCGAAGAGGT 13447 ||||||||| |||||| ||| || ||| || ||| ||||||||||||||||| | Sbjct 19505574 GATGAGCCTCCTCGATACCGGAGCCCGGTACCAGCCGGTGCTCGTCTACCCCGAAGAGCT 19505515 Query 13448 CGTCACNNNNNNNNNNGGCAACACCCAGACCCGCCCATCCAAGACCGGCATCCCGGCCAA 13507 |||| || |||| |||||| || || |||||| |||| || | Sbjct 19505514 GGTCATCGACGCGGACGGGAACAAGAAGACCCAGCCGTCGAAGACCCCGATCCAAGCGAT 19505455 Query 13508 GGCGCGATTCCAGGT-GCAAGGCCAGTCCGGTACGTCGGCACGACG 13552 || || |||||||| || | |||||||||||||||||||||||| Sbjct 19505454 CGCACGCTTCCAGGTCGCCAA-CCAGTCCGGTACGTCGGCACGACG 19505410 >seq9 Length=46179939 Score = 295 bits (326), Expect = 2e-75 Identities = 534/767 (70%), Gaps = 22/767 (3%) Strand=Plus/Minus Query 43293 GTAGCTCACGTCGCAAAAAGCGCACTTGTCCGGCTCTGGGTCCGGGTCAAAGCGCTCGGC 43352 |||| ||| || || || ||| |||||||| || || |||||| || | ||| Sbjct 16532313 GTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAACATCGAGGC 16532254 Query 43353 GGCGATGTTCTCTTCCAGTTCGCGGAACTTCTCCGCGACCCTCTCGCGGGGCCACTCCCC 43412 ||||| || || | | |||||| ||| | || || || | ||||| | Sbjct 16532253 TGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGT 16532194 Query 43413 CAAGTCGTAGGGGTACGTCGGCTTGC---CCTTCACGCCTTTCTTCCCGGCCATGTAGTA 43469 || ||||||||| | |||||||| |||| ||| |||||||| ||||| |||| Sbjct 16532193 CAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTT---GCCCTTCTTCCCCACCATGAAGTA 16532137 Query 43470 GTCCCCGATCTGCGGGGGCTCGATGCCGTAGGTCTCGGCCAGGGCAA-CGCTGTAGACGC 43528 ||| ||| ||| ||| | ||||| ||||||||| || | || | ||| ||| |||| Sbjct 16532136 GTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCGC-GTACACGC 16532078 Query 43529 CAAGCTGGAAGTCGTCACCGGGGGTGTTGCCGGTCTTGTAGTCCCGGACGATCACGTTGC 43588 | ||||||||||||||||| || ||| |||||||||||||||||||| | | | Sbjct 16532077 CGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCC 16532018 Query 43589 CGTCGCTGTCCCTCAGCACGGTGTCGATGTAGCCCCGGACCAAGACTCCGTCGAGGTCGA 43648 |||| | || | |||| ||||||||| || || |||| || |||||||| |||| Sbjct 16532017 CGTC---GACCACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTCGAGCTCGA 16531961 Query 43649 TGTCGAAACCCAGCTCGATGCCTGGGGTGCCGTCAGGGGCGATCCAGATGACCTCTTCGG 43708 | ||||| ||||||||| |||| || ||||| |||| | |||||| ||| | | Sbjct 16531960 TCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTCCTGGCCCG 16531901 Query 43709 GGTGGCCTTCGGTCCAGGCGAAGAACTTCTCGATCTGTTCGAGCCCGATGTGCCAACGGC 43768 | | || | | ||| |||||||||||||||| ||| || || |||| | | |||| Sbjct 16531900 G--AGTCTCCCG-CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGTGTACCGGC 16531844 Query 43769 GTTCGAGATCGCTCGCGCCGTCGTAGCGGCCCGACCGGAACCACCAGTCGAAGTTCGGGG 43828 | |||| || | | |||| ||| | || |||| |||||| ||||||||||||| Sbjct 16531843 GCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACTCGAAGTTCGGGG 16531784 Query 43829 TCACGTCGGTGTACTGCGAC-ACCTCTTTGGCGTACTCCTCCTTGAACATCTCCTGGGCC 43887 || | |||||| | || | || || |||||||| | | |||||| |||| |||| Sbjct 16531783 TCTCCTCGGTG-AAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATGTCCTTGGCC 16531725 Query 43888 TCTTCAAGGCTCATTGGATCACCGTCGAGTTCCC--GCCTGCGGTACTCCTCCAGGACGG 43945 || ||||| ||| || |||| | |||| ||| | | |||| ||| | Sbjct 16531724 TCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCT--CGACCGCCTCAGCGACAG 16531667 Query 43946 TGTGGACTGCGCTCCCCTGCGGGAGCCAGGCGGCTGGCCTCTGCCATACCTTGTCGACGC 44005 ||||| || |||||||||| |||||||| ||||||| |||||| |||||||||| | Sbjct 16531666 CGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTTGTCGATCC 16531607 Query 44006 GGGCCAGCTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGAGCTG 44051 | || |||||||| || | |||||| | |||||| |||| ||| Sbjct 16531606 GAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGATCTG 16531561 Score = 275 bits (304), Expect = 2e-69 Identities = 224/271 (83%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 48559 GAGAAGAGCACCGACTTGCGTCCGTTGATGCAGAGCCCGCAGCGAGCGCAGGCTGAACCC 48618 ||||| || || |||||||||||||||||| || ||||| | ||||||||| || ||| Sbjct 16530395 GAGAACAGAACGCTCTTGCGTCCGTTGATGCACAGACCGCACCTAGCGCAGGCCGATCCC 16530336 Query 48619 TTGTCGCTGATCAGCTCGATGGCTTTGTTGTTC---TCCGGGCACCGCGTGGCGTTCGGG 48675 ||| || ||||||| |||| | || ||||||| |||||||| ||| ||| ||||| Sbjct 16530335 TTGGCGTTGATCAGGTCGAAGTCTCGGTTGTTCAGCTCCGGGCAGCGCACGGCCGTCGGG 16530276 Query 48676 AACTGCGCCTTGCCTTCTGCGAAGGTCTGGTCGACGTAGGCGATGTTGATGCCCTTGCCT 48735 ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 16530275 AACTGTGCCTTGCCTTCGGCGAACGTCGTGTCGACGTAGGCGATGTTGATGCCCTTGCCT 16530216 Query 48736 TCGAGGAACCGTGCGACCTCGATGTTGTCTCGATCCGCGCTGAAGTAGAGCGCGAGGTTC 48795 || |||||||| || || || | |||||| |||||||||||||||| |||| |||||| Sbjct 16530215 TCCAGGAACCGGGCCACGTCTACGTTGTCGGGATCCGCGCTGAAGTACAGCGACAGGTTC 16530156 Query 48796 GACAGCTTCTGCGCGTGCAGGAACACGGCTG 48826 ||||||||||| | ||||||| | || |||| Sbjct 16530155 GACAGCTTCTGTGAGTGCAGGTAGACCGCTG 16530125 >seq1 Length=46747018 Score = 185 bits (204), Expect = 3e-42 Identities = 172/212 (81%), Gaps = 10/212 (5%) Strand=Plus/Minus Query 3929 CATTGATCTGTAGCTCAATCGGCAGAGCACCCGGCTGTTAACCGGGACGTTGGAGGTTCG 3988 || ||| ||||||||||| ||||||||| ||||||||||||||| |||| ||||||| Sbjct 34903449 CACTGACGTGTAGCTCAAT-GGCAGAGCATCCGGCTGTTAACCGGACGGTTGAAGGTTCG 34903391 Query 3989 AGTCCTCCCAGATCAGCCATGCGAGCGGCCCCTGCCCAAAGGGAGG--AGCCCTCGCACA 4046 |||||| || ||||||| ||| |||| || ||| || | || ||||| ||||| Sbjct 34903390 AGTCCTTCCTCGTCAGCCAAGCGGGCGGTTCC---CCAGAGCGTGGGGAGCCCCCGCACC 34903334 Query 4047 TAGG-CACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTCG 4105 || ||||||||||||||||| ||||||| |||||||||||||||||| | |||||||| Sbjct 34903333 AAGTACACGTAGCTCAATTGGT-AGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCG 34903275 Query 4106 AGTCCTGCCGTGTCTGCAACCACCCAGTTCCC 4137 | ||||| ||||| ||| ||||||| ||||| Sbjct 34903274 ACTCCTGGCGTGTATGCCACCACCC--TTCCC 34903245 Score = 143 bits (158), Expect = 9e-30 Identities = 193/264 (73%), Gaps = 5/264 (2%) Strand=Plus/Minus Query 660 GCGACCGAGGTCGACCACATCCGTCGTGGTGACGACCATTCACGCGCCAACCTACGAGCC 719 || ||||| || ||||||| | || ||||||| || || ||||||| | ||| Sbjct 34905184 GCCACCGACGTAGACCACAAGAAGCCAGGGAACGACCACTCGCGGTCCAACCTGCAAGCG 34905125 Query 720 GCGTGCTCTTGGTGCCACGGCAAGAAGTCATCCGCTGAGGGCAACGCCCGGAAGCGGCAG 779 ||| | |||||||||||||||||| ||||||||||| ||||| |||| | Sbjct 34905124 ATCTGCCGTGTCTGCCACGGCAAGAAGTCAGCCGCTGAGGGCGTAGCCCGACGGCGGGAA 34905065 Query 780 TTACGAGCCAGGAGGAAGCGACC-GACCGAACGCCACCCTGGCCG-CATATAGCGGGCCA 837 | ||| ||||||||||||| || | ||||||||||||| || | | ||||||||| Sbjct 34905064 CTCAAGGCCCGGAGGAAGCGACCAGAAC-AACGCCACCCTGGGCGTCGTTAAGCGGGCCA 34905006 Query 838 GGAGCCCGCTGACCACCCAGGAGGTGACAGTGGGCGAACGAGGCCCTGTGCGTAAACGGT 897 || ||| ||| |||||||||||||||| |||||| ||| ||||| | | ||||| Sbjct 34905005 GGTGCCTGCT--CCACCCAGGAGGTGACTGTGGGCACACGCGGCCCCATCGGAAAACGCG 34904948 Query 898 CGGATCAACGCGTCCGACGCAACA 921 || ||||||| || ||||||| Sbjct 34904947 ACGAAGAACGCGTTCGTCGCAACA 34904924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162797339848000