Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq1048 84.2 5e-12 >seq1048 Length=3623 Score = 84.2 bits (92), Expect = 5e-12 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 13282 TGCCGTCATTAATGGCTGTCTTGGAGTTGGTACGACGAATGCACTAGGTGGTAGCTCTAT 13341 ||| || |||| || ||||||| | ||| | |||| || || |||| || || Sbjct 1113 TGCTGTTGTTAACGGTGGTCTTGGGCTGGGTGTGGTCAATGGTCTTGGCGGTAATTCCAT 1054 Query 13342 TGTCCTTGGTGATAATGATACCGGATTTAAACAGAATGGAGACGGTATTCTTGATGTTTA 13401 ||| || ||||| ||||| ||||| ||||||||||| ||||| || ||||| |||||||| Sbjct 1053 TGTTCTGGGTGACAATGACACCGGCTTTAAACAGAACGGAGATGGCATTCTGGATGTTTA 994 Query 13402 TGCTAACAG 13410 || || || Sbjct 993 CGCCAATAG 985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104465493005952