Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_013594.1 Length=37235 Score E Sequences producing significant alignments: (Bits) Value seq1048 152 1e-32 >seq1048 Length=3623 Score = 152 bits (168), Expect = 1e-32 Identities = 177/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 34619 GTGTTGTAGTCTCGTCGCCAGCCAGGAGCATAAGCATCACCATGATTAATATAAGTGAAT 34678 |||||||| |||| |||||| |||| ||||| || ||| ||||||||||| ||||| Sbjct 1516 GTGTTGTAATCTCTGCGCCAGGCAGGGGCATACGCGCTACCGTGATTAATATAGGTGAAC 1575 Query 34679 TGAGCGTTAGTAATTCCGCCACCGCTGGACGTGCTCGGCGTGGTAACGCGTATGGTCATT 34738 ||||| | ||| || |||||| | | ||| | ||||| ||||| || ||||||||| Sbjct 1576 TGAGCACAGGCAATCCCACCACCGGTAGTCGTTGTAGGCGTAGTAACTCGGATGGTCATT 1635 Query 34739 GCGCCGCGAGTGCCAATAACTTCCACCACAGCACCTGCAAGACAAATATTTCCGCAACCT 34798 ||||| || || | ||| || | || ||||| |||||||| ||||| ||| |||| Sbjct 1636 GCGCCTTCGGTACCTAAAACCTCGATAACCGCACCAGCAAGACAGATATTACCGACACCT 1695 Query 34799 GTATCTGTAATGACCTTATTATTTGCATAAGCCCATGAGCCTTTGCACATCCAGTAAGG 34857 ||||| || || | ||||| | ||||| | ||| || || || ||||||||| || Sbjct 1696 GTATCAGTGATAATTTTATTGTCGGCATATGACCAGGAACCCTTCATCATCCAGTACGG 1754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119028455043264