Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq1375 558 4e-154 seq15 558 4e-154 seq16 553 2e-152 seq6 233 2e-56 seq4 181 1e-40 seq10 125 8e-24 seq13 123 3e-23 seq3 123 3e-23 >seq1375 Length=152860 Score = 558 bits (618), Expect = 4e-154 Identities = 723/999 (72%), Gaps = 0/999 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| || ||| | ||| | ||||| |||| ||||| ||||| || Sbjct 1374 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1315 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 |||||||| ||||| || ||| | | ||| ||| | ||||| |||||||| || Sbjct 1314 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 1255 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 || || ||||| || || || | |||||||| | || |||| | || |||||||| Sbjct 1254 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 1195 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 || || |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 1194 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 1135 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||| || | | ||||| ||| |||| || ||||||||||| | | | | Sbjct 1134 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 1075 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850 | ||||| || | || | || || |||||| | |||||||| | | | | Sbjct 1074 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1015 Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 1014 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 955 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 || ||| | | |||||| ||||||| || ||| ||||||||||||||||||||||| Sbjct 954 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 895 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 ||||| || |||||||| ||| | |||||||| || |||||||||||||||||||| || Sbjct 894 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 835 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||||||| Sbjct 834 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 775 Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150 || | ||||| ||| | | ||||| || || || || | |||||| || | ||| Sbjct 774 TCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 715 Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210 |||| |||||||||||||||||||| || || ||||| || || || || || || || Sbjct 714 TACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 655 Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270 |||| |||||||| ||||| ||||||||||| || | | | || |||||| |||| Sbjct 654 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 595 Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330 | | || || ||| || | ||||| || || | ||||| |||| ||||| |||||| Sbjct 594 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 535 Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390 | || || || || || ||||||||||| || ||| | | || | ||| ||| Sbjct 534 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACT 475 Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450 |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| ||| Sbjct 474 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 415 Query 169451 CACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 ||||||||||| |||||| |||| ||| |||| || || Sbjct 414 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 376 >seq15 Length=39600445 Score = 558 bits (618), Expect = 4e-154 Identities = 723/999 (72%), Gaps = 0/999 (0%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| || ||| | ||| | ||||| |||| ||||| ||||| || Sbjct 11974440 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 11974499 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 |||||||| ||||| || ||| | | ||| ||| | ||||| |||||||| || Sbjct 11974500 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 11974559 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 || || ||||| || || || | |||||||| | || |||| | || |||||||| Sbjct 11974560 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 11974619 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 || || |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 11974620 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 11974679 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||| || | | ||||| ||| |||| || ||||||||||| | | | | Sbjct 11974680 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 11974739 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850 | ||||| || | || | || || |||||| | |||||||| | | | | Sbjct 11974740 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 11974799 Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 11974800 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 11974859 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 || ||| | | |||||| ||||||| || ||| ||||||||||||||||||||||| Sbjct 11974860 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 11974919 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 ||||| || |||||||| ||| | |||||||| || |||||||||||||||||||| || Sbjct 11974920 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 11974979 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||||||| Sbjct 11974980 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 11975039 Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150 || | ||||| ||| | | ||||| || || || || | |||||| || | ||| Sbjct 11975040 TCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 11975099 Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210 |||| |||||||||||||||||||| || || ||||| || || || || || || || Sbjct 11975100 TACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 11975159 Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270 |||| |||||||| ||||| ||||||||||| || | | | || |||||| |||| Sbjct 11975160 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 11975219 Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330 | | || || ||| || | ||||| || || | ||||| |||| ||||| |||||| Sbjct 11975220 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 11975279 Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390 | || || || || || ||||||||||| || ||| | | || | ||| ||| Sbjct 11975280 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACT 11975339 Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450 |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| ||| Sbjct 11975340 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 11975399 Query 169451 CACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 ||||||||||| |||||| |||| ||| |||| || || Sbjct 11975400 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 11975438 >seq16 Length=39632211 Score = 553 bits (612), Expect = 2e-152 Identities = 722/999 (72%), Gaps = 0/999 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| || ||| | ||| | ||||| |||| ||||| ||||| || Sbjct 8699535 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 8699476 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 |||||||| ||||| || ||| | | ||| ||| | ||||| |||||||| || Sbjct 8699475 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 8699416 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 || || ||||| || || || | |||||||| | || |||| | || |||||||| Sbjct 8699415 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 8699356 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 || || |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 8699355 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 8699296 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||| || | | ||||| ||| |||| || ||||||||||| | | | | Sbjct 8699295 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 8699236 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850 | ||||| || | | | || || |||||| | |||||||| | | | | Sbjct 8699235 CTACACTTTTTACTTTGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 8699176 Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 8699175 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 8699116 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 || ||| | | |||||| ||||||| || ||| ||||||||||||||||||||||| Sbjct 8699115 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 8699056 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 ||||| || |||||||| ||| | |||||||| || |||||||||||||||||||| || Sbjct 8699055 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 8698996 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||||||| Sbjct 8698995 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 8698936 Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150 || | ||||| ||| | | ||||| || || || || | |||||| || | ||| Sbjct 8698935 TCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 8698876 Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210 |||| |||||||||||||||||||| || || ||||| || || || || || || || Sbjct 8698875 TACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 8698816 Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270 |||| |||||||| ||||| ||||||||||| || | | | || |||||| |||| Sbjct 8698815 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 8698756 Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330 | | || || ||| || | ||||| || || | ||||| |||| ||||| |||||| Sbjct 8698755 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 8698696 Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390 | || || || || || ||||||||||| || ||| | | || | ||| ||| Sbjct 8698695 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACT 8698636 Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450 |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| ||| Sbjct 8698635 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 8698576 Query 169451 CACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 ||||||||||| |||||| |||| ||| |||| || || Sbjct 8698575 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 8698537 >seq6 Length=47127078 Score = 233 bits (258), Expect = 2e-56 Identities = 227/292 (78%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 168954 GTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACA 169013 |||||||||||||||| ||||| || |||||||| ||| | |||||||| || ||||||| Sbjct 23298193 GTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACA 23298134 Query 169014 ACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTAT 169073 ||||||||||||| || || || ||| ||| ||||| ||| | ||||| || || |||| Sbjct 23298133 ACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTAT 23298074 Query 169074 TCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAG 169133 | || ||||||||||| | ||||| ||| | | ||||| || || || || | | Sbjct 23298073 TTAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATG 23298014 Query 169134 AATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAG 169193 ||||| || | ||||||| |||||||||||||||||||| || || ||||| || | Sbjct 23298013 AATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTG 23297954 Query 169194 CACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245 | || || || || || |||| |||||||| ||||| ||||||||||| || Sbjct 23297953 CTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTC 23297902 >seq4 Length=41855496 Score = 181 bits (200), Expect = 1e-40 Identities = 217/295 (74%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 169195 ACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCT 169254 ||| || || || || |||| |||||||| ||||| ||||||||||| || | | | Sbjct 22261815 ACACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTT 22261874 Query 169255 TCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTG 169314 || |||||| |||| | | || || ||| || | ||||| || || | ||||| | Sbjct 22261875 ACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAG 22261934 Query 169315 TACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGG 169374 ||| ||||| |||||| | || || || || || ||||||||||| || ||| | | || Sbjct 22261935 TACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGG 22261994 Query 169375 TAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAAT 169434 | ||| ||| |||| ||| | ||||| | || ||||||||||||||||| || Sbjct 22261995 ACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTAT 22262054 Query 169435 GCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 |||||| ||||| |||||||||||||| |||||| |||| ||| |||| || || Sbjct 22262055 GCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 22262109 >seq10 Length=21498587 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 168962 CTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTT 169021 ||| |||| ||||| || |||||||| ||| | ||||||| || ||||||||||||||| Sbjct 19441000 CTATGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTT 19440941 Query 169022 ATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCA 169081 ||||| || || || || ||| |||| ||| | ||| |||| || |||| | Sbjct 19440940 ATGCACCCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTT 19440881 Query 169082 ATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAG 169141 ||| |||||| | ||||| ||| | |||| || | || || | | |||||| Sbjct 19440880 ATGTATGGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCT 19440821 Query 169142 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGT 169188 ||| | |||| | |||||||||||||||||||| || || ||||| Sbjct 19440820 AACGAAAGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGT 19440774 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 168962 CTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTT 169021 ||| |||| ||||| || |||||||| ||| | ||||||| || ||||||||||||||| Sbjct 20472808 CTATGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTT 20472749 Query 169022 ATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCA 169081 ||||| || || || || ||| |||| ||| | ||| |||| || |||| | Sbjct 20472748 ATGCACCCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTT 20472689 Query 169082 ATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAG 169141 ||| |||||| | ||||| ||| | |||| || | || || | | |||||| Sbjct 20472688 ATGTATGGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCT 20472629 Query 169142 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGT 169188 ||| | |||| | |||||||||||||||||||| || || ||||| Sbjct 20472628 AACGAAAGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGT 20472582 Score = 105 bits (116), Expect = 8e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 169009 GCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATC 169068 |||||||||||||||||| || || || ||| ||| ||||| ||| | ||| | || || Sbjct 16594593 GCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTC 16594652 Query 169069 TCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGA 169128 ||||| | || ||| |||| | ||||| | | | | |||| | | || || || Sbjct 16594653 CCTATTTAATGTTATACATTGTTCTTTGGTAACTTTTAGTTTGATCAAAAAAACCACAGA 16594712 Query 169129 GGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGT 169188 | |||||| || | |||||| |||||||||||||||||||| || ||| |||| Sbjct 16594713 AAATGAATCTGTTAATGAAGGTTACGGATTCGGTCAAGAAGAAGAAACTTACAATTTTGT 16594772 Query 169189 TGCAGCACATGGATACTTCGGTAGATTAATC 169219 || || || || || | ||| |||| ||| Sbjct 16594773 AGCTGCTCACGGTTATTCTGGTCGATTGATC 16594803 >seq13 Length=54295181 Score = 123 bits (136), Expect = 3e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 169097 GTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAG 169156 ||||| ||| | | ||||| || ||||| || | |||||| || | ||||||| Sbjct 52172387 GTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAGA 52172328 Query 169157 TTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTA 169216 |||||||||||||||||||| || || ||||| || || || || || || || |||| Sbjct 52172327 TTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTG 52172268 Query 169217 ATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTC 169276 |||||||| ||||| ||||||||||| || | | | || |||||| |||| | | Sbjct 52172267 ATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGG 52172208 Query 169277 CCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTAC 169317 || || ||| || | ||||| || || | ||||| |||| Sbjct 52172207 CCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTAC 52172167 >seq3 Length=51870232 Score = 123 bits (136), Expect = 3e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 169097 GTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAG 169156 ||||| ||| | | ||||| || ||||| || | |||||| || | ||||||| Sbjct 19550225 GTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAGA 19550284 Query 169157 TTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTA 169216 |||||||||||||||||||| || || ||||| || || || || || || || |||| Sbjct 19550285 TTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTG 19550344 Query 169217 ATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTC 169276 |||||||| ||||| ||||||||||| || | | | || |||||| |||| | | Sbjct 19550345 ATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGG 19550404 Query 169277 CCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTAC 169317 || || ||| || | ||||| || || | ||||| |||| Sbjct 19550405 CCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTAC 19550445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564431891604480