Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq1375 533 2e-146 seq15 533 2e-146 seq16 529 3e-145 seq6 246 5e-60 seq10 158 2e-33 seq4 154 2e-32 seq13 102 1e-16 seq3 102 1e-16 >seq1375 Length=152860 Score = 533 bits (590), Expect = 2e-146 Identities = 716/995 (72%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 || ||| | ||| | ||| |||||| || ||| | ||| |||| ||||||||||| | Sbjct 1374 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1315 Query 215354 ATGATTCCTTGCCTCCT---CGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCA 215410 ||||| ||| | | | |||| || || || | | |||| ||||||| ||||| Sbjct 1314 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCG---CATTCATTGCTGCT 1258 Query 215411 CCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAAC 215470 ||||| || ||||| || || || | || || ||| |||| ||| | | || || ||| Sbjct 1257 CCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAAC 1198 Query 215471 AACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCT 215530 || || || || ||||| || | |||| ||| || || || || || || ||||| Sbjct 1197 AATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCG 1138 Query 215531 ATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTT 215590 ||||||||||| ||| | ||||| |||||||| ||||| ||||| |||| |||| || Sbjct 1137 ATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATT 1078 Query 215591 ATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTAC 215650 | | ||||| | ||||| | || || || | ||||||||||| || | Sbjct 1077 GTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 1018 Query 215651 AGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTT 215710 | | |||||| | |||||||| |||||| || || || ||||| | ||||| | Sbjct 1017 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 958 Query 215711 GCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGA 215770 || || ||| | | || ||| | ||||| || ||| ||||||| |||||| || ||| Sbjct 957 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 898 Query 215771 ATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCAC 215830 |||||||| || ||||||| ||| |||| ||||||||||||||||||||||| |||||| Sbjct 897 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 838 Query 215831 CCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCAC 215890 ||||| |||||||||||||| |||||||| ||||| || || | || ||| ||||| Sbjct 837 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 778 Query 215891 GGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTAC 215950 ||||| | || || ||| | | ||||| || || || || | |||||| || | Sbjct 777 GGTTCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 718 Query 215951 GGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTT 216010 ||||||| ||||| ||||| || ||||| |||||||| |||||||| |||||||| ||| Sbjct 717 GGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTT 658 Query 216011 GGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTT 216070 || || | ||||||||||| || ||||||||| || | | | || |||||| | Sbjct 657 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 598 Query 216071 GCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTC 216130 || || | || || | |||| ||| ||||| | ||| | |||||||| ||| Sbjct 597 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTC 538 Query 216131 AACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCT 216190 ||||| || |||||||| |||||||| || || || || || |||||| | Sbjct 537 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAAT 478 Query 216191 ACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAAC 216250 |||||||| || || ||||| | || |||||||||||||| ||||| || ||||| Sbjct 477 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 418 Query 216251 GCTCACAACTTCCCATTAGACTTGGCTGCTGCTGA 216285 |||||||||||||| ||||| | ||||||| ||| Sbjct 417 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 383 >seq15 Length=39600445 Score = 533 bits (590), Expect = 2e-146 Identities = 716/995 (72%), Gaps = 6/995 (1%) Strand=Plus/Plus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 || ||| | ||| | ||| |||||| || ||| | ||| |||| ||||||||||| | Sbjct 11974440 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 11974499 Query 215354 ATGATTCCTTGCCTCCT---CGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCA 215410 ||||| ||| | | | |||| || || || | | |||| ||||||| ||||| Sbjct 11974500 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCG---CATTCATTGCTGCT 11974556 Query 215411 CCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAAC 215470 ||||| || ||||| || || || | || || ||| |||| ||| | | || || ||| Sbjct 11974557 CCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAAC 11974616 Query 215471 AACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCT 215530 || || || || ||||| || | |||| ||| || || || || || || ||||| Sbjct 11974617 AATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCG 11974676 Query 215531 ATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTT 215590 ||||||||||| ||| | ||||| |||||||| ||||| ||||| |||| |||| || Sbjct 11974677 ATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATT 11974736 Query 215591 ATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTAC 215650 | | ||||| | ||||| | || || || | ||||||||||| || | Sbjct 11974737 GTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 11974796 Query 215651 AGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTT 215710 | | |||||| | |||||||| |||||| || || || ||||| | ||||| | Sbjct 11974797 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 11974856 Query 215711 GCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGA 215770 || || ||| | | || ||| | ||||| || ||| ||||||| |||||| || ||| Sbjct 11974857 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 11974916 Query 215771 ATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCAC 215830 |||||||| || ||||||| ||| |||| ||||||||||||||||||||||| |||||| Sbjct 11974917 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 11974976 Query 215831 CCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCAC 215890 ||||| |||||||||||||| |||||||| ||||| || || | || ||| ||||| Sbjct 11974977 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 11975036 Query 215891 GGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTAC 215950 ||||| | || || ||| | | ||||| || || || || | |||||| || | Sbjct 11975037 GGTTCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 11975096 Query 215951 GGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTT 216010 ||||||| ||||| ||||| || ||||| |||||||| |||||||| |||||||| ||| Sbjct 11975097 GGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTT 11975156 Query 216011 GGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTT 216070 || || | ||||||||||| || ||||||||| || | | | || |||||| | Sbjct 11975157 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 11975216 Query 216071 GCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTC 216130 || || | || || | |||| ||| ||||| | ||| | |||||||| ||| Sbjct 11975217 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTC 11975276 Query 216131 AACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCT 216190 ||||| || |||||||| |||||||| || || || || || |||||| | Sbjct 11975277 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAAT 11975336 Query 216191 ACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAAC 216250 |||||||| || || ||||| | || |||||||||||||| ||||| || ||||| Sbjct 11975337 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 11975396 Query 216251 GCTCACAACTTCCCATTAGACTTGGCTGCTGCTGA 216285 |||||||||||||| ||||| | ||||||| ||| Sbjct 11975397 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 11975431 >seq16 Length=39632211 Score = 529 bits (586), Expect = 3e-145 Identities = 715/995 (72%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 || ||| | ||| | ||| |||||| || ||| | ||| |||| ||||||||||| | Sbjct 8699535 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 8699476 Query 215354 ATGATTCCTTGCCTCCT---CGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCA 215410 ||||| ||| | | | |||| || || || | | |||| ||||||| ||||| Sbjct 8699475 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCG---CATTCATTGCTGCT 8699419 Query 215411 CCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAAC 215470 ||||| || ||||| || || || | || || ||| |||| ||| | | || || ||| Sbjct 8699418 CCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAAC 8699359 Query 215471 AACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCT 215530 || || || || ||||| || | |||| ||| || || || || || || ||||| Sbjct 8699358 AATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCG 8699299 Query 215531 ATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTT 215590 ||||||||||| ||| | ||||| |||||||| ||||| ||||| |||| |||| || Sbjct 8699298 ATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATT 8699239 Query 215591 ATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTAC 215650 | | ||||| | || || | || || || | ||||||||||| || | Sbjct 8699238 GTTCTACACTTTTTACTTTGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 8699179 Query 215651 AGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTT 215710 | | |||||| | |||||||| |||||| || || || ||||| | ||||| | Sbjct 8699178 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 8699119 Query 215711 GCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGA 215770 || || ||| | | || ||| | ||||| || ||| ||||||| |||||| || ||| Sbjct 8699118 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 8699059 Query 215771 ATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCAC 215830 |||||||| || ||||||| ||| |||| ||||||||||||||||||||||| |||||| Sbjct 8699058 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 8698999 Query 215831 CCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCAC 215890 ||||| |||||||||||||| |||||||| ||||| || || | || ||| ||||| Sbjct 8698998 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 8698939 Query 215891 GGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTAC 215950 ||||| | || || ||| | | ||||| || || || || | |||||| || | Sbjct 8698938 GGTTCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 8698879 Query 215951 GGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTT 216010 ||||||| ||||| ||||| || ||||| |||||||| |||||||| |||||||| ||| Sbjct 8698878 GGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTT 8698819 Query 216011 GGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTT 216070 || || | ||||||||||| || ||||||||| || | | | || |||||| | Sbjct 8698818 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 8698759 Query 216071 GCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTC 216130 || || | || || | |||| ||| ||||| | ||| | |||||||| ||| Sbjct 8698758 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTC 8698699 Query 216131 AACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCT 216190 ||||| || |||||||| |||||||| || || || || || |||||| | Sbjct 8698698 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAAT 8698639 Query 216191 ACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAAC 216250 |||||||| || || ||||| | || |||||||||||||| ||||| || ||||| Sbjct 8698638 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 8698579 Query 216251 GCTCACAACTTCCCATTAGACTTGGCTGCTGCTGA 216285 |||||||||||||| ||||| | ||||||| ||| Sbjct 8698578 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 8698544 >seq6 Length=47127078 Score = 246 bits (272), Expect = 5e-60 Identities = 229/291 (79%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 215758 TATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAA 215817 |||||| || ||||||||||| || ||||||| ||| |||| ||||||||||||||||| Sbjct 23298192 TATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAA 23298133 Query 215818 CATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTT 215877 |||||| ||||||||||| |||||||||||||| |||||||| ||||| || || | || Sbjct 23298132 CATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATT 23298073 Query 215878 CTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGA 215937 ||| ||||| ||||| | || || ||| | | ||||| || || || || | || Sbjct 23298072 TAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGA 23298013 Query 215938 ATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGC 215997 |||| || | ||||||| ||||| ||||| || ||||| |||||||| |||||||| Sbjct 23298012 ATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGC 23297953 Query 215998 ACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTC 216048 |||||||| ||||| || | ||||||||||| || ||||||||| || Sbjct 23297952 TCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTC 23297902 >seq10 Length=21498587 Score = 158 bits (174), Expect = 2e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 215769 GAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGC 215828 |||||||||| || ||||||| ||| |||| |||| |||||||||||||||||| |||| Sbjct 19440996 GAATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGC 19440937 Query 215829 ACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGC 215888 ||||||| ||||| |||||||| | |||||| ||| ||||||| || || || ||| Sbjct 19440936 ACCCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGT 19440877 Query 215889 ACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACT 215948 | |||| | || || ||| | |||| || | || || | | |||||| ||| Sbjct 19440876 ATGGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACG 19440817 Query 215949 ACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACA 216000 | |||| | ||||| ||||| || ||||| |||||||| ||| |||| || Sbjct 19440816 AAAGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAACTGCTCA 19440765 Score = 158 bits (174), Expect = 2e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 215769 GAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGC 215828 |||||||||| || ||||||| ||| |||| |||| |||||||||||||||||| |||| Sbjct 20472804 GAATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGC 20472745 Query 215829 ACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGC 215888 ||||||| ||||| |||||||| | |||||| ||| ||||||| || || || ||| Sbjct 20472744 ACCCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGT 20472685 Query 215889 ACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACT 215948 | |||| | || || ||| | |||| || | || || | | |||||| ||| Sbjct 20472684 ATGGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACG 20472625 Query 215949 ACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACA 216000 | |||| | ||||| ||||| || ||||| |||||||| ||| |||| || Sbjct 20472624 AAAGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAACTGCTCA 20472573 Score = 120 bits (132), Expect = 5e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 215812 GCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTC 215871 |||||||||||| ||||||||||| |||||||||||||| |||||||| ||| | || || Sbjct 16594593 GCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTC 16594652 Query 215872 ATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGA 215931 | || || || || |||| | || || | | | | |||| | | || || || Sbjct 16594653 CCTATTTAATGTTATACATTGTTCTTTGGTAACTTTTAGTTTGATCAAAAAAACCACAGA 16594712 Query 215932 GCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGT 215991 | |||||| || | |||||| ||||| ||||| || ||||| ||||| | || Sbjct 16594713 AAATGAATCTGTTAATGAAGGTTACGGATTCGGTCAAGAAGAAGAAACTTACAATTTTGT 16594772 Query 215992 AGCTGCACACGGTTACTTTGGTCG 216015 |||||| |||||||| | |||||| Sbjct 16594773 AGCTGCTCACGGTTATTCTGGTCG 16594796 >seq4 Length=41855496 Score = 154 bits (170), Expect = 2e-32 Identities = 207/288 (72%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 215998 ACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCT 216057 ||||||||| ||||| || | ||||||||||| || ||||||||| || | | | Sbjct 22261815 ACACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTT 22261874 Query 216058 TCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTC 216117 || |||||| | || || | || || | |||| ||| ||||| | ||| | Sbjct 22261875 ACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAG 22261934 Query 216118 AACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGG 216177 |||||||| |||||||| || |||||||| |||||||| || || || || || Sbjct 22261935 TACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGG 22261994 Query 216178 TAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAAT 216237 |||||| ||||||||| || || ||||| | || |||||||||||||| || Sbjct 22261995 ACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTAT 22262054 Query 216238 GCACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGA 216285 ||| || ||||| |||||||||||||| ||||| | ||||||| ||| Sbjct 22262055 GCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 22262102 >seq13 Length=54295181 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| || | ||||||| ||||| ||||| || Sbjct 52172372 ATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAA 52172313 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| |||||||| |||||||| |||||||| ||||| || | ||||||||||| || Sbjct 52172312 GAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 52172253 Query 216035 TCTTTCAACAACTC 216048 ||||||||| || Sbjct 52172252 AGTTTCAACAATTC 52172239 >seq3 Length=51870232 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| || | ||||||| ||||| ||||| || Sbjct 19550240 ATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAA 19550299 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| |||||||| |||||||| |||||||| ||||| || | ||||||||||| || Sbjct 19550300 GAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 19550359 Query 216035 TCTTTCAACAACTC 216048 ||||||||| || Sbjct 19550360 AGTTTCAACAATTC 19550373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745068784596480