Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_017985.1 Length=40128 Score E Sequences producing significant alignments: (Bits) Value seq14 91.5 4e-14 >seq14 Length=60807478 Score = 91.5 bits (100), Expect = 4e-14 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 12821 AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGACCAAATACAGATGGATTTCTAAGGG 12880 ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| ||| Sbjct 38780475 AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGT 38780534 Query 12881 CAT 12883 ||| Sbjct 38780535 CAT 38780537 Score = 91.5 bits (100), Expect = 4e-14 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 12821 AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGACCAAATACAGATGGATTTCTAAGGG 12880 ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| ||| Sbjct 38781980 AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGT 38781921 Query 12881 CAT 12883 ||| Sbjct 38781920 CAT 38781918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128285903774080