Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_019705.1 Length=38759 Score E Sequences producing significant alignments: (Bits) Value seq477 1178 0.0 >seq477 Length=38297 Score = 1178 bits (1306), Expect = 0.0 Identities = 2061/2984 (69%), Gaps = 93/2984 (3%) Strand=Plus/Minus Query 2161 TTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCTGCGTGAGCCTGATTTCAA 2220 ||| ||||||||| | |||| || || || ||| ||| | || ||||| |||| Sbjct 19374 TTACCGATGAACGTAATATGCAGATCAGCACCGTTTGGTCTTGCATAAGACTGATATCAA 19315 Query 2221 CGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAACAGACCAGAATGACAACCGTAAAA 2280 | | || |||| | ||||| ||||| || ||||| | |||||| | ||| | | Sbjct 19314 CCGTGACAGCATCTCTCCCGCTAGATGTGTTTGAAACTGTT---AATGACCAACGTCAGA 19258 Query 2281 AAGT-GGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAATCAGTACATG 2339 |||| ||| || ||||| |||||||| || ||||| | | || ||| | | ||| Sbjct 19257 AAGTCGGAAACGAA-AATCCCCTGGCGCGCCTCCTGCGATTCCGTCCAAATAATTTTATG 19199 Query 2340 ACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGTAACGCATAT 2399 ||||| | ||||| | || || ||||| ||||| |||||| || || || || || Sbjct 19198 ACCGCGCTTGAATTTCGCGAAGCGATGACAATGCAACTCTGTGCATATGGGAATGCGTAC 19139 Query 2400 GCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTTCAGTCTGCC 2459 || | || || || || |||| ||||| ||||||||| | | ||| | | ||| Sbjct 19138 GCCCACGTTGAGCGAAATAGCGTTGGTGATGTGATCAGCATGGTTCCGTTAATGAGCGCC 19079 Query 2460 AATATGGATGTGAAGCTC-GT-----CGGaaaaaaaGTGGTTTATCGCTATCAACGCGAC 2513 |||||||||||| ||| || ||| ||||| || |||| |||||| |||| || Sbjct 19078 AATATGGATGTGCGACTCAGTGATAACGGCAAAAACGTTATTTACCGCTATAAACGAGAT 19019 Query 2514 AGCGAATACGCCGAATTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATTCACC 2573 | |||||||| || || || ||||| ||||| || || ||||| || || || | | Sbjct 19018 ACGGAATACGCAGACTTCAAGCCTAAAGAAATTTTCCATCTGAAAGGTTTTGGTTTTAAC 18959 Query 2574 GGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGT---AAATCGGCAGGTGTGGCAGTT 2630 || || || || ||||| || | || || | || |||||||| |||||||| | Sbjct 18958 GGTCTAGTGGGGCTGTCTCCGTTGGCCTT---CAGTGCGAAATCGGCCGGTGTGGCGATC 18902 Query 2631 GCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTC 2690 || ||||| ||| | ||||| || || ||||| || ||||||||||| |||||||| || Sbjct 18901 GCTATGGAAGACAATCAGCGCGAGTTTTTTGCTAATGGCGCCAAGTCACCGCAAATTCTG 18842 Query 2691 TCAACTGGCGAAAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTTCAAA 2750 || | | || ||||| ||| || | ||||| || | ||||| |||||||| Sbjct 18841 ATGACAGATGGCAAGGTGCTTACTAAAGATCAGCGTGGACAACTGGAAGAAAACTTCAAG 18782 Query 2751 GAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTCTACA 2810 ||||||||||||||||| || ||||| ||||| |||||||||||| || ||| | || Sbjct 18781 GAGATCGCCGGCGGCCCAGTTAAAAAGCGCCTTTGGATTCTGGAAAGTGGATTTACCACT 18722 Query 2811 TCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAGGTA 2870 ||| || || || |||| |||| | ||||| | | | || || ||||||||| Sbjct 18721 CAGGCTATAGGGATATCTCCAGCGGATTCTCAAATGCTTGAAGCGCGTAAGTTTCAGGTA 18662 Query 2871 AGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAATCA 2930 ||||||||||| || | ||| || ||||||||||| || || || ||||||||| || Sbjct 18661 GCCGAACTGGCGCGCTTTTATGGTGTCCCGCCTCACCTGGTAGGGGATGTCGAGAAAACA 18602 Query 2931 ACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTGCAG 2990 || ||||| || || || || || || ||||| ||||||||||||||| | | Sbjct 18601 ACTTCATGGGGTAGCGGTATTGAACAACAAAACCTCGGATTCCTGCAGTACACCTTAAAA 18542 Query 2991 CCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGATGTT 3050 || ||| | | |||||| |||| ||| |||| ||| | | | | ||| Sbjct 18541 CCTTATCTTGATCGCTGGGAATACAGTATTGAGCGCTGGTTGGTAAAAGATGCCGATCAG 18482 Query 3051 GGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATCCCGC 3110 ||| | |||||||||||||| || | ||||| || ||| | || |||||| || |||| Sbjct 18481 GGCAGGATTCATGCTGAGCATAATTTAGACGGTCTACTGCGCGGTGATTCGACAAGCCGC 18422 Query 3111 GCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCGACGA 3170 || | || ||| | |||||| | | || | |||||| ||||||| | | ||| Sbjct 18421 GCCTCTTTCATGCAAACAATGGTGAATACTGGTATTCGCACCGTCAACGAAGTCAGGCGA 18362 Query 3171 ACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATACGTG 3230 ||| ||| | || || | || || || ||||| || | ||||||||||| |||| Sbjct 18361 CTGGATAACTTGCCACCGCTTCCCGGCGGAGATGTAGCGACACGCCAGTCGCAGAACGTA 18302 Query 3231 CCGATCACCGATTTAGGAACCAACAAAGAGCCCCGTAATAACGGGGCTTAATTTTTATGG 3290 || || |||||| | |||| | |||||||||||| | | |||||||||||||||||||| Sbjct 18301 CCCATTACCGATCTCGGAAGAACCAAAGAGCCCCGCACTGACGGGGCTTAATTTTTATGG 18242 Query 3291 GGGCCGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCAAATTCA 3350 ||||| | |||||||| || ||||| ||| | |||||| |||||||||| || || | Sbjct 18241 GGGCCATGATGCCTGATATTCAGAAAACCCTGGCGTTCGACCAGACAGAAATAAAGTTTA 18182 Query 3351 CCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACACCGATT 3410 |||| |||||| | | || | |||||| ||||||||||| ||||| || || || || | Sbjct 18181 CCGGCGACGGTGATAAAGGCACTTTTGAGGGCTACGCCTCAGTTTTCAACAATACGGACT 18122 Query 3411 CCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAGACCCGAA 3470 |||| || ||||| || ||||| || || || | | | || || | ||||| Sbjct 18121 CCGACGGAGACATTATCCTGCCAGGTGCATTCAGCGGTGTTATTGCTGGTCAAAGCCGAA 18062 Query 3471 AAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGGGACAGCC 3530 | || || ||||| |||||||| |||| | | | || ||||| |||||||| | Sbjct 18061 AGGTCGCCATGTTCTTTAACCATCAGACGCGCGCGATCCCTGTTGGTAAATGGGATTCCA 18002 Query 3531 TGGCTGAGGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACACAGCGGCG 3590 || ||||||||| ||||| |||| ||| ||||||||||| || ||||||| || Sbjct 18001 TGCATGAGGACGATAAAGGGCTGTTTGTTCGCGGTCAACTCACGCCAGGACTTAGTCTGT 17942 Query 3591 CCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTGGCTTTT 3650 | | |||||||||||||||||| | ||||| || |||||||||||||| || || || | Sbjct 17941 CTGAGGACCTGAAAGCGGCAATGAAACACGGCACCGTTGAAGGTATGTCAGTCGGTTTCT 17882 Query 3651 CCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATATCCAGG 3710 |||| || ||||| || || | | |||| |||||| || || || Sbjct 17881 CCGTCGGCCCCGATGATTATACAGTCGGCACTTCCGGCCTCATTTTCAAAAACATTTCTT 17822 Query 3711 CTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCGCAGCCA 3770 |||||| |||||||| |||||||||||||| |||||||| | ||||||| | | |||| Sbjct 17821 ATCTGCGGGAAATCAGTGTCTGCACTTTCCCGGCCAACGAGCTGGCTGGCGTGACCGCCA 17762 Query 3771 TGAAAAGTGTCGATGGCATTGAAACGATTCGTGATGTGGAGAACTGGCTGAGGGATTCAG 3830 |||||||| |||| ||||| |||| |||||||| | ||| ||||||||||||||||| Sbjct 17761 TGAAAAGTATCGACGGCATCAAAACCATTCGTGACGCGGAAGCCTGGCTGAGGGATTCAG 17702 Query 3831 TCGG------CCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCAGCGA 3884 |||| || | | || | |||||| || |||||||| ||||||| || Sbjct 17701 TCGGTTTGACCCGCTCTGAAGCGCAGGCATTT------ATTGCCCGCGTTAAGTCCGCAG 17648 Query 3885 TTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCAGAGCA 3944 ||||||||||||| ||| || | || |||| ||| ||| ||| Sbjct 17647 GCCGGAGCGAGTCCGGTAGCGGCG------------ACATTGACGCGCTGGCACAGCGCA 17600 Query 3945 TCAAATCTTTCCCTTCTAA-CTTAGG--TAAATAA---------TTATGTCTGAACTCG- 3991 | || || || | |||| || || | |||| |||||||||| | | Sbjct 17599 TAAACTCATTTGCCGCTAATCTGCGGAATGCATAACGGAGCACCATATGTCTGAATTAGC 17540 Query 3992 CTCTCATTCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGC 4051 | ||| | ||||||| || || | ||||| | || | | | || |||| Sbjct 17539 CACTC-TCGAAAAAGCGATTGAGAATTCCCAAAAAGAAGTTAAGGAACTCATCGA----- 17486 Query 4052 AGAA-AGCAGAAATCGA--AAGCACA--GGCCAGGTTTCCAAACAGTTGCAGTCCGACCT 4106 |||| ||| ||||| | || || | ||| | || || | ||||| |||| || Sbjct 17485 AGAACAGCGTAAATCCATCAATCAGAACGGCGAAATTAACACGAAACTGCAGGCCGATCT 17426 Query 4107 AATGAAAGTACAGGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAA 4166 | |||| ||||||||||||| | ||||||||||||| |||||||| || || || Sbjct 17425 GACCAAAGCTCAGGAAGAGCTGAAGACCACCGGCACTCGCCTGTTCGATCTTGAGCAAAA 17366 Query 4167 ACTGGCATCCGGCGCTGAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGA 4226 ||| || | | | ||| || | | || || || | || || | | || Sbjct 17365 ACTTGCTGGTAACTCACCGGATCAGACTGCGCAAAAGTCATTTGCCGAGCGCGTGTCCGA 17306 Query 4227 AGAGCTTATTAAGTCATGGGACGGTAAACAGGGCACCTTTG---GCGCTAAAACGTTTAA 4283 ||| || || || ||||| || | ||||| | | || | ||| | Sbjct 17305 AGACCTGATGAAAGGCTGGGATGGCTCCC---GCACCAAAGCGAAAGTTACCAGCTTTGA 17249 Query 4284 CAAGTCACTAGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCC 4343 || | | || | ||| | || || || | ||| ||||||| ||| || || Sbjct 17248 TAAAGCGATCGGTTCCGGCGCAGCGTCAGCGGGTGCCCTGGTCCAGCCGCAGCAAATGCC 17189 Query 4344 AGGCATCATCATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCG 4403 ||| || | |||||||| ||||| ||||| ||| ||||||| || ||||| || ||||| Sbjct 17188 AGGTATTCTGATGCCAGGGCTGCGTCGTCTGACCGTTCGTGACCTTCTGGCACAAGGCCG 17129 Query 4404 CACTTCCAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGT 4463 | | |||||||||| |||||||| |||||||| | ||||| ||| ||||| | | Sbjct 17128 TATTACCAGTAACGCGCTGGAATACGTGCGTGAGAATGTGTTCACC---AACGCTGCTGC 17072 Query 4464 G---GTGGCAGAGAAAGCA--CTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACC 4518 | ||||| ||| ||| || ||||| ||| | |||||||||| |||| |||| Sbjct 17071 GCCAGTGGC--GGAAGGCACCCTCAAGCCTGAAAGTAACATCACCTTCACCAAAGAAACG 17014 Query 4519 GCGAACGTGAAGACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCG 4578 ||||||||||| |||||||| |||||| | ||||| || || ||| | ||||| ||||| Sbjct 17013 GCGAACGTGAAAACCATCGCCCACTGGATCCAGGCGTCGCGACAGATCATGGACGATGCT 16954 Query 4579 CCAATGCTTCAGTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAG 4638 || ||| ||||||||||| ||| |||| | ||||| || ||||| ||| |||||| Sbjct 16953 CCGGCGCTGCAGTCCTACATCAACTCCCGCATGATGTATGGGCTGGCGCTGGTGGAAGAA 16894 Query 4639 GGCCAGCTGCTGAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCA 4698 ||| |||| ||||| || || || || ||||| ||| | || | ||| ||| || Sbjct 16893 AATCAGATGCTAAACGGTGATGGGACTGGCGATAATCTGCAGGGCATTAACGTAGTCGCG 16834 Query 4699 ACCGCCTATGACACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCAC 4758 | || |||||| ||| |||| ||||| ||||| || || | |||||||| ||||||| Sbjct 16833 AACGACTATGAAACCGCGCTCAATGCTACCGGTGATACTGGTGCTGACATCCTCGCTCAT 16774 Query 4759 GCTATTTATCAGGTG------ACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAAC 4812 || || ||||||||| | ||| | ||| |||| ||| || |||| ||| Sbjct 16773 GCGATCTATCAGGTGTCTCTCAGCGAATTTGA----AGCG--GACGGCATTATCCTTAAC 16720 Query 4813 CCGCGCGACTGGCACAACATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGT 4872 ||| ||||||||| || || | |||| || | | ||| || ||| | || Sbjct 16719 CCGGCAGACTGGCACCGGATTGCTCTATTGAAGGATGCTAACGGCAATTACATCCTTGGC 16660 Query 4873 GGTCCTCAGGCATTCACCAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCG 4932 || || ||||| || || || | ||||||| | || || ||| | || | ||| Sbjct 16659 GGGCCGCAGGCGTTTGCCTCCAAGGTGCTGTGGGGGCTTCCGGTTGTTTCTACCACGGCC 16600 Query 4933 CAGGCCGCCGGCACCTTTACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGC 4992 || || | || ||||| || || || | || | | | || || ||||| |||||||| Sbjct 16599 CAAGCATCAGGTACCTTCACTGTTGGAGCGTTTGGTCTTGCGTCTCAGGTATGGGATCGT 16540 Query 4993 ATGGATGCCACCGTGGAAGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTG 5052 ||||||||||| | || | ||| | | || || || |||||||| |||||||||||| Sbjct 16539 ATGGATGCCACTATCGAGATCAGCAATCAGGATCGAGACAACTTCGTTAAAAACATGCTG 16480 Query 5053 ACCATCCTGTGCGAAGAGCGTCTGGCGCTGGCGCATTATCGCCC 5096 |||||||||||||||||||| |||| |||| |||||||| || Sbjct 16479 ACCATCCTGTGCGAAGAGCGCTTGGCATTGGCTCATTATCGTCC 16436 Score = 681 bits (754), Expect = 0.0 Identities = 1034/1453 (71%), Gaps = 49/1453 (3%) Strand=Plus/Minus Query 6882 CAGGACGACAACGTGGTCTATCCCTATGTGGTCTGGCAGAACATCACCGGTTCTCCAGAG 6941 ||||| ||||| |||||||||||||||| || ||||||||||||| |||||| || ||| Sbjct 14646 CAGGATGACAATGTGGTCTATCCCTATGCCGTTTGGCAGAACATCAGCGGTTCACCTGAG 14587 Query 6942 AACTACATTGCCCAGCGCCCTGACGCAGACTTTTTCACGCTGCAGGTGGATGCATATGCC 7001 |||||| | | | | ||||| ||| | ||| | |||||||||||| |||| |||||| Sbjct 14586 AACTACCTGGACAAACGCCCGGACACTGACAGCTACACGCTGCAGGTAGATGTGTATGCC 14527 Query 7002 GACACCGTGGATGAAGTGATTGCCGTGGCTACTGCGCTGCGGGATGCCATTGAGCCGCAC 7061 || || || | | | ||||||| || |||||||| |||||||||||||| ||| Sbjct 14526 GATACGGTCGCGTCTGCTACATCCGTGGCAACAGCGCTGCGTGATGCCATTGAGCCACAC 14467 Query 7062 GCGCATATCACGCGCTGGGGCGGACAGGAAAGAGACCCCGAAACAAAGCGCTATCGCTAC 7121 || | || || | |||||||| ||| | ||||| |||||||||||||||||||| Sbjct 14466 GCCTACATTACCAGATGGGGCGGGCAGAGCCGCGACCCAGAAACAAAGCGCTATCGCTAT 14407 Query 7122 TCATTCGATGTTGACTGGATAGTCACTCGATAAACGT----ATTATTCAACC-ACCGGCC 7176 |||||||| ||||| |||||||| ||| ||| | | | |||||| ||||||| Sbjct 14406 TCATTCGACGTTGATTGGATAGTGCTTCGTTAACATTCCCAACTTTTCAACATACCGGCC 14347 Query 7177 TTGAGCCGGtttttttATGACCGGAGATAACAATGTCTGTATTGACGCAAGGTACGCAGC 7236 ||| |||||||||||||||||||||||| || |||||||||||||| ||||| || ||| Sbjct 14346 TTGCGCCGGTTTTTTTATGACCGGAGATCACCATGTCTGTATTGACACAAGGCACCCAGT 14287 Query 7237 TCTTTGTGCTCGTAAAAGGCAAGGTGAGCGAAGTTGAATGTATCACTGCATTTTCACCCG 7296 | | ||| |||| || ||| || |||||||||||||| ||||| |||| | |||| Sbjct 14286 TTTATGTCCTCGCCAACGGCGTTGTAAGCGAAGTTGAATGCATCACATCATTCACCCCCG 14227 Query 7297 GCAGCAATCCGGCTGACCAGATTGAAGACACCTGTCTTTCTGAGCGCTTTGATCGCAGCT 7356 || | || || ||||||||||| ||||| |||||| | |||||| |||| || Sbjct 14226 GCGGTAACCCTGCTGACCAGATCGAAGATACCTGTTTAAGCGAGCGCAACAGCCGCACCT 14167 Query 7357 ATAAGCGTGGTCTTCGAACGCCTGGCA-CAGCATCACTGACGCTTAACGCTGATCCTAAA 7415 |||| ||||| || || || |||| |||| | | ||||| || |||||||| ||| Sbjct 14166 ATAAAAAAGGTCTGCGCACACC-GGCATCAGCTACCGTCACGCTGAATGCTGATCCAAAA 14108 Query 7416 AATACCAGCCACATCATGCTCTACAACCTGTCCATTTCGGACGACGAAAAGGATCAGGAC 7475 || |||||||| | ||||| | |||||| | || |||||||| |||| Sbjct 14107 AACGCCAGCCACCTGATGCTGCATAACCTGGCAGAATCTGACGACGA-----ATCA-CTG 14054 Query 7476 CTGACCTTCGCGATTGGATGGTCAGACGGAACCGCATCGCCAACTGCGGCTGAAAATGGT 7535 |||||||| || |||| ||| |||| || || |||||||| || | |||| Sbjct 14053 CTGACCTTTGCCGTTGGCTGGGCAGATGGTGAATCAGAACCAACTGCAGCAGCGCCTGGT 13994 Query 7536 GCATCCGGTGCAGTCGATGGCCTGGTGCTACCTGATAGCCGCACATGGTTCGTATTCAAA 7595 || | || || |||||| || || | ||||| || || ||||| || ||| || Sbjct 13993 GCTCCAAACGCTGTAGATGGCTTGCTGTTGCCTGACGATCGTACCTGGTTTGTTTTCCAA 13934 Query 7596 GGCTATGTGTCCGACTTCCCGTTTGATTTTGCAGCAAACACGGTTGTTTCTACTTCTGCA 7655 ||||| || |||| ||||| || ||||| |||||||| || || || | || Sbjct 13933 GGCTACGTTACCGATTTCCCATTCGATTTCCAGGCAAACACAGTGGTGAGCACGACCGCG 13874 Query 7656 TCTATCCAGCGCTCCGGCTCTGCTGTATGGGTGCCAAAAG-TCGTGACCCCA--TAA--A 7710 |||| ||||| || || || | || ||||| ||||| | || | | || ||| | Sbjct 13873 ACTATTCAGCGTTCTGGTCCTTCCGTTTGGGTTCCAAAGGCTCAAGCCGGCAGCTAATCA 13814 Query 7711 AT--------CAGGGC----GGCAACGCCCTTATTAATCA-GGAT--TAA--TAATGAAA 7753 || | |||| || ||| | | | ||| ||| ||| |||||| Sbjct 13813 ATCTATCCGCCGGGGCCGAGTGCCCCGCGTTAACTTCTCATTGATGGTAACGACATGAAA 13754 Query 7754 TTAACACTTGATGCACTCAAGGAGTCCGGCGCGTTTACCGGTCGCCCGGTTGAGAAAGAA 7813 ||||| || || | | || || ||||| ||||||||||||||||| ||||||||| Sbjct 13753 TTAACTCTGGAATCGTTGAAAGAACATGGCGCCTTTACCGGTCGCCCGGTAGAGAAAGAA 13694 Query 7814 ATCACCTGGACGCAAGGCGATaaaaaaaTCACCGCGACCGTGTATGTTCGCCCGATGGGT 7873 |||||||||| ||| ||||| ||| || | || || || |||| ||| || || ||||| Sbjct 13693 ATCACCTGGAAGCAGGGCGAGAAAGAACTGACGGCAACGGTGTTTGTACGGCCTTTGGGT 13634 Query 7874 TATCACACAGCAACGTCCGATGTGCTGGCTTTTGGTGGTAAGGTCGATGGTGTGGCAGGG 7933 || |||| || || ||| | || || | ||||| || || ||||| || || || Sbjct 13633 TACTACACTGCGCGATCAGATATTCTCGCGGTAGGTGGAAAAGTTGATGGCGTTGCTGGT 13574 Query 7934 CGTATCGCCGCATCCATCTGCGATGAACATGGTAAACCCATCTTCACCCCGGCTGACATT 7993 || ||||| || || || || ||||| |||| | || | || ||||| || || || Sbjct 13573 CGCATCGCAGCTTCTATTTGTGATGAGAATGGCCAGCCAGTATTTACCCCTGCAGATATC 13514 Query 7994 ACTGGTGAGGCAGATCCTGAACGTGGTGCACTGGATGGCGGCCTGACGGTAGCACTGCTT 8053 ||||||||||| ||||| || |||||||| || ||||| | | || || || |||| Sbjct 13513 ACTGGTGAGGCGGATCCGGATCGTGGTGCGCTTGATGGTGCTTTAACAGTGGCTTTGCTG 13454 Query 8054 CTGGCCATTCAGGAAGTTAACGATCTGGGAAAGACTTCGAGC--TCAGCGCCGAAGACGA 8111 |||||||||| || || || | ||||||||||| |||| ||||||| || ||||| Sbjct 13453 GTGGCCATTCAAGAGGTCAATAACCTGGGAAAGAC--GGAGCCATCAGCGCAGACGACGA 13396 Query 8112 ATTCTGGTGCGAGCTCGTCCTCAACGGAATCGGAGGCAGAACAATCGCCGAAGCGCGGGA 8171 | ||||||||| | ||||| || || || || ||||| ||| | || || || | ||| Sbjct 13395 AGCCTGGTGCGAATTAGTCCTGAATGGTATTGGCGGCAGGACAGTGGCAGAGGCTCAGGA 13336 Query 8172 AGTCCTCTCA----TTCAAAGAGTCCCAACTCTGGGCAAAGTACCGGGAACGA-TACGGG 8226 | ||||| ||| |||| | || ||| ||||| | | ||| | | || Sbjct 13335 --GCGTCTCAGCCTTTC--TGAGTTTCGCCTGTGGATGAAGTATC-GTAACAAGTTTGGC 13281 Query 8227 AGTCTGAACCCTATGTTGCGGGTTGAGTGGGGTGCCGGGCTGGTGAGCAGCATGATAGCC 8286 ||||| ||||||||| ||||| |||||||||||||| ||||||| || | ||| || Sbjct 13280 AGTCTAAACCCTATGATGCGGACTGAGTGGGGTGCCGCGCTGGTGGCAAGTACGATCGCA 13221 Query 8287 AACGTTAACAGAG 8299 ||||| || |||| Sbjct 13220 AACGTCAATAGAG 13208 Score = 136 bits (150), Expect = 1e-27 Identities = 397/595 (67%), Gaps = 36/595 (6%) Strand=Plus/Minus Query 5698 GAGTGGATAAAAAAGTGGGCAAAAATAGCTTATGAACGAGCAACTGGTAAACGAACTGAT 5757 || ||| |||| || ||| | || || ||||| ||||||| |||||||| |||||| Sbjct 15786 GAATGGTTAAAGAACTGGTTGAGGATTGCCCATGAAAGAGCAACAGGTAAACGCACTGAT 15727 Query 5758 AGCAGTGATACGGGAACAAATCACAGCGCAGAGGGAGCAGACGGAAGCGATAAGCCGTCT 5817 ||||| | | |||| | | | || || ||| ||||| | ||| ||| ||| || Sbjct 15726 AGCAGCACTGCAGGAAGAGACGAAGGCAAAGCAGGAACAGACAGCAGCACTAACCCGCCT 15667 Query 5818 GGCTGAATCAAATATGGCGCTTTGCGATGTCATT----ATCCAGTC-GC--TGGCTGGTG 5870 |||||| || ||| || | || ||| || || || || || || | | | Sbjct 15666 GGCTGAGTCCAATGAATCGTTGGTCGCTGTTCTTGTTGATGCATTCAGCAATGACATGGG 15607 Query 5871 A-AC-TAGATG-------AAAC--TGCAGAGCAACAAACCTATCTGAGCGGTAAACCCAG 5919 | || | ||| |||| || ||||| |||| |||||| ||| || | | Sbjct 15606 AGACGTTGATATCATTAAAAACGATG-AGAGC--CAAAACTATCTCAGC----AATC--G 15556 Query 5920 GGGGTAAC-ATGCAGGCCGGGAAATTGCGCCACAGGATTACTCTGCAGGAGCCAGTAAAA 5978 ||||||| ||||||||||| || ||||||| | || || ||||| |||| || || Sbjct 15555 GGGGTAATTATGCAGGCCGGTAAGCTGCGCCATCGCATCACCTTGCAGAAGCCCGTTAAG 15496 Query 5979 GTGCAGAACCCGACAACGGGAGCCGTAATTAATACCTGGCGAGATGTTGCG--ACTGTCC 6036 |||||| | || ||| || | ||| |||| |||| ||| |||| ||| | Sbjct 15495 GTGCAGGATCCTGAAACTGGTTCAGTAGAAAATATATGGCAGGATCTTGCTCAACTTT-- 15438 Query 6037 GGGCCGAAGTTTCACCATTGTCAGCGCGTGAATTTATTGCTGCGCAGGCTTCTCAGGGTG 6096 ||||||| ||||| || | || || || || ||| | || || ||||| || || Sbjct 15437 GGGCCGAGGTTTCTCCGCTTTCTGCCCGAGAGTTTGTGGCCGCTCAGGCAATGCAAAATG 15378 Query 6097 AAATAACCACCCGTATTGTTATTCGCTACCGTGCCGGAGTTACCAG--AAAACATCGCAT 6154 | || || | ||| | | ||||||||| | || | | || |||| |||| || Sbjct 15377 CCGTCACTACAAGGATTACTGTCCGCTACCGT-CAAGACAT-CGAGCCAAAATATCGGAT 15320 Query 6155 CTTGTTTCGTGGTGCTGTGTATAACATCCATGGTGTTCTGCCCGATCCAAAAAGCGGACG 6214 |||||||| ||| | | ||||| | ||| || || ||||||| ||||| || | Sbjct 15319 ATTGTTTCGCGGTAAAATATTCAACATTGAAGGTATTTTGTCCGATCCGAAAAGTGGTCT 15260 Query 6215 TGAATACCTGACGCTTCCCTGTTCTGAGGGTGTTAATGATGGCTGATAGTGTTGA 6269 |||||| |||||| | || ||||| || || ||| |||||||||||| | ||||| Sbjct 15259 TGAATATCTGACGTTGCCATGTTCGGAAGGGGTTGATGATGGCTGATGGCGTTGA 15205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123905175356352