Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq477 1187 0.0 >seq477 Length=38297 Score = 1187 bits (1316), Expect = 0.0 Identities = 2063/2984 (69%), Gaps = 93/2984 (3%) Strand=Plus/Minus Query 2254 TTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCTGCGTGAGCCTGATTTCAA 2313 ||| ||||||||| | |||| || || || ||| ||| | || ||||| |||| Sbjct 19374 TTACCGATGAACGTAATATGCAGATCAGCACCGTTTGGTCTTGCATAAGACTGATATCAA 19315 Query 2314 CGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAACAGACCAGAATGACAACCGTAAAA 2373 | | || |||| | ||||| ||||| || ||||| | |||||| | ||| | | Sbjct 19314 CCGTGACAGCATCTCTCCCGCTAGATGTGTTTGAAACTGTT---AATGACCAACGTCAGA 19258 Query 2374 AAGT-GGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAATCAGTACATG 2432 |||| ||| || ||||| |||||||| || ||||| | | || ||| | | ||| Sbjct 19257 AAGTCGGAAACGAA-AATCCCCTGGCGCGCCTCCTGCGATTCCGTCCAAATAATTTTATG 19199 Query 2433 ACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGTAACGCATAT 2492 ||||| | ||||| | || || ||||| ||||| |||||| || || || || || Sbjct 19198 ACCGCGCTTGAATTTCGCGAAGCGATGACAATGCAACTCTGTGCATATGGGAATGCGTAC 19139 Query 2493 GCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTACTCCCGCTTCAGTCTGCC 2552 || | || || || || |||| ||||| ||||||||| | | ||| | | ||| Sbjct 19138 GCCCACGTTGAGCGAAATAGCGTTGGTGATGTGATCAGCATGGTTCCGTTAATGAGCGCC 19079 Query 2553 AATATGGATGTGAAACTC-GT-----CGGaaaaaaaGTGGTTTATCGCTATCAACGCGAC 2606 |||||||||||| |||| || ||| ||||| || |||| |||||| |||| || Sbjct 19078 AATATGGATGTGCGACTCAGTGATAACGGCAAAAACGTTATTTACCGCTATAAACGAGAT 19019 Query 2607 AGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATTCACC 2666 | |||||||| ||||| || ||||| ||||| || || ||||| || || || | | Sbjct 19018 ACGGAATACGCAGACTTCAAGCCTAAAGAAATTTTCCATCTGAAAGGTTTTGGTTTTAAC 18959 Query 2667 GGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGT---AAATCGGCAGGTGTGGCAGTT 2723 || || || || ||||| || | || || | || |||||||| |||||||| | Sbjct 18958 GGTCTAGTGGGGCTGTCTCCGTTGGCCTT---CAGTGCGAAATCGGCCGGTGTGGCGATC 18902 Query 2724 GCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTC 2783 || ||||| ||| | ||||| || || ||||| || ||||||||||| |||||||| || Sbjct 18901 GCTATGGAAGACAATCAGCGCGAGTTTTTTGCTAATGGCGCCAAGTCACCGCAAATTCTG 18842 Query 2784 TCAACTGGCGAAAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTTCAAA 2843 || | | || ||||| ||| || | ||||| || | ||||| |||||||| Sbjct 18841 ATGACAGATGGCAAGGTGCTTACTAAAGATCAGCGTGGACAACTGGAAGAAAACTTCAAG 18782 Query 2844 GAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTCTACA 2903 ||||||||||||||||| || ||||| ||||| |||||||||||| || ||| | || Sbjct 18781 GAGATCGCCGGCGGCCCAGTTAAAAAGCGCCTTTGGATTCTGGAAAGTGGATTTACCACT 18722 Query 2904 TCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAGGTA 2963 ||| || || || |||| |||| | ||||| | | | || || ||||||||| Sbjct 18721 CAGGCTATAGGGATATCTCCAGCGGATTCTCAAATGCTTGAAGCGCGTAAGTTTCAGGTA 18662 Query 2964 AGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAATCA 3023 ||||||||||| || | ||| || ||||||||||| || || || ||||||||| || Sbjct 18661 GCCGAACTGGCGCGCTTTTATGGTGTCCCGCCTCACCTGGTAGGGGATGTCGAGAAAACA 18602 Query 3024 ACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTGCAG 3083 || ||||| || || || || || || ||||| ||||||||||||||| | | Sbjct 18601 ACTTCATGGGGTAGCGGTATTGAACAACAAAACCTCGGATTCCTGCAGTACACCTTAAAA 18542 Query 3084 CCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGATGTT 3143 || ||| | | |||||| |||| ||| |||| ||| | | | | ||| Sbjct 18541 CCTTATCTTGATCGCTGGGAATACAGTATTGAGCGCTGGTTGGTAAAAGATGCCGATCAG 18482 Query 3144 GGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGAGATTCGGCATCCCGC 3203 ||| | |||||||||||||| || | ||||| || ||| | || |||||| || |||| Sbjct 18481 GGCAGGATTCATGCTGAGCATAATTTAGACGGTCTACTGCGCGGTGATTCGACAAGCCGC 18422 Query 3204 GCTGCCTTTATGAAGGCAATGGGAGAGTCAGGGCTACGCACCATCAACGAGATGCGACGA 3263 || | || ||| | |||||| | | || | |||||| ||||||| | | ||| Sbjct 18421 GCCTCTTTCATGCAAACAATGGTGAATACTGGTATTCGCACCGTCAACGAAGTCAGGCGA 18362 Query 3264 ACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATACGTG 3323 ||| ||| | || || | || || || ||||| || | ||||||||||| |||| Sbjct 18361 CTGGATAACTTGCCACCGCTTCCCGGCGGAGATGTAGCGACACGCCAGTCGCAGAACGTA 18302 Query 3324 CCGATCACCGATTTAGGAACCAACAAAGAGCCCCGTAATAACGGGGCTTAATTTTTATGG 3383 || || |||||| | |||| | |||||||||||| | | |||||||||||||||||||| Sbjct 18301 CCCATTACCGATCTCGGAAGAACCAAAGAGCCCCGCACTGACGGGGCTTAATTTTTATGG 18242 Query 3384 GGGCCGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCAAATTCA 3443 ||||| | |||||||| || ||||| ||| | |||||| |||||||||| || || | Sbjct 18241 GGGCCATGATGCCTGATATTCAGAAAACCCTGGCGTTCGACCAGACAGAAATAAAGTTTA 18182 Query 3444 CCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACACCGATT 3503 |||| |||||| | | || | |||||| ||||||||||| ||||| || || || || | Sbjct 18181 CCGGCGACGGTGATAAAGGCACTTTTGAGGGCTACGCCTCAGTTTTCAACAATACGGACT 18122 Query 3504 CCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAGACCCGAA 3563 |||| || ||||| || ||||| || || || | | | || || | ||||| Sbjct 18121 CCGACGGAGACATTATCCTGCCAGGTGCATTCAGCGGTGTTATTGCTGGTCAAAGCCGAA 18062 Query 3564 AAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGGGACAGCC 3623 | || || ||||| |||||||| |||| | | | || ||||| |||||||| | Sbjct 18061 AGGTCGCCATGTTCTTTAACCATCAGACGCGCGCGATCCCTGTTGGTAAATGGGATTCCA 18002 Query 3624 TGGCTGAGGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACACAGCGGCG 3683 || ||||||||| ||||| |||| ||| ||||||||||| || ||||||| || Sbjct 18001 TGCATGAGGACGATAAAGGGCTGTTTGTTCGCGGTCAACTCACGCCAGGACTTAGTCTGT 17942 Query 3684 CCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTGGCTTTT 3743 | | |||||||||||||||||| | ||||| || |||||||||||||| || || || | Sbjct 17941 CTGAGGACCTGAAAGCGGCAATGAAACACGGCACCGTTGAAGGTATGTCAGTCGGTTTCT 17882 Query 3744 CCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATATCCAGG 3803 |||| || ||||| || || | | |||| |||||| || || || Sbjct 17881 CCGTCGGCCCCGATGATTATACAGTCGGCACTTCCGGCCTCATTTTCAAAAACATTTCTT 17822 Query 3804 CTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCGCAGCCA 3863 |||||| |||||||| |||||||||||||| |||||||| | ||||||| | | |||| Sbjct 17821 ATCTGCGGGAAATCAGTGTCTGCACTTTCCCGGCCAACGAGCTGGCTGGCGTGACCGCCA 17762 Query 3864 TGAAAAGTGTCGATGGTATTGAAACGATTCGTGATGTGGAGAACTGGCTGAGGGATTCAG 3923 |||||||| |||| || || |||| |||||||| | ||| ||||||||||||||||| Sbjct 17761 TGAAAAGTATCGACGGCATCAAAACCATTCGTGACGCGGAAGCCTGGCTGAGGGATTCAG 17702 Query 3924 TCGG------CCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCAGCGA 3977 |||| || | | || | |||||| || |||||||| ||||||| || Sbjct 17701 TCGGTTTGACCCGCTCTGAAGCGCAGGCATTT------ATTGCCCGCGTTAAGTCCGCAG 17648 Query 3978 TTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCAGAGCA 4037 ||||||||||||| ||| || | || |||| ||| ||| ||| Sbjct 17647 GCCGGAGCGAGTCCGGTAGCGGCG------------ACATTGACGCGCTGGCACAGCGCA 17600 Query 4038 TCAAATCTTTCCCTTCTAA-CTTAGG--TAAATAA---------TTATGTCTGAACTCG- 4084 | || || || | |||| || || | |||| |||||||||| | | Sbjct 17599 TAAACTCATTTGCCGCTAATCTGCGGAATGCATAACGGAGCACCATATGTCTGAATTAGC 17540 Query 4085 CTCTCATTCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGC 4144 | ||| | ||||||| || || | ||||| | || | | | || |||| Sbjct 17539 CACTC-TCGAAAAAGCGATTGAGAATTCCCAAAAAGAAGTTAAGGAACTCATCGA----- 17486 Query 4145 AGAA-AGCAGAAATCGA--AAGCACA--GGCCAGGTTTCCAAACAGTTGCAGTCCGACCT 4199 |||| ||| ||||| | || || | ||| | || || | ||||| |||| || Sbjct 17485 AGAACAGCGTAAATCCATCAATCAGAACGGCGAAATTAACACGAAACTGCAGGCCGATCT 17426 Query 4200 GATGAAAGTACAGGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAA 4259 || |||| ||||||||||||| | ||||||||||||| |||||||| || || || Sbjct 17425 GACCAAAGCTCAGGAAGAGCTGAAGACCACCGGCACTCGCCTGTTCGATCTTGAGCAAAA 17366 Query 4260 ACTGGCATCCGGCGCTGAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGA 4319 ||| || | | | ||| || | | || || || | || || | | || Sbjct 17365 ACTTGCTGGTAACTCACCGGATCAGACTGCGCAAAAGTCATTTGCCGAGCGCGTGTCCGA 17306 Query 4320 AGAGCTTATTAAGTCATGGGACGGTAAACAGGGCACCTTTG---GCGCTAAAACGTTTAA 4376 ||| || || || ||||| || | ||||| | | || | ||| | Sbjct 17305 AGACCTGATGAAAGGCTGGGATGGCTCCC---GCACCAAAGCGAAAGTTACCAGCTTTGA 17249 Query 4377 CAAGTCACTAGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCC 4436 || | | || | ||| | || || || | ||| ||||||| ||| || || Sbjct 17248 TAAAGCGATCGGTTCCGGCGCAGCGTCAGCGGGTGCCCTGGTCCAGCCGCAGCAAATGCC 17189 Query 4437 AGGCATCATCATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCG 4496 ||| || | |||||||| ||||| ||||| ||| ||||||| || ||||| || ||||| Sbjct 17188 AGGTATTCTGATGCCAGGGCTGCGTCGTCTGACCGTTCGTGACCTTCTGGCACAAGGCCG 17129 Query 4497 CACTTCCAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGT 4556 | | |||||||||| |||||||| |||||||| | ||||| ||| ||||| | | Sbjct 17128 TATTACCAGTAACGCGCTGGAATACGTGCGTGAGAATGTGTTCACC---AACGCTGCTGC 17072 Query 4557 G---GTGGCAGAGAAAGCA--CTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACC 4611 | ||||| ||| ||| || ||||| ||| | |||||||||| |||| |||| Sbjct 17071 GCCAGTGGC--GGAAGGCACCCTCAAGCCTGAAAGTAACATCACCTTCACCAAAGAAACG 17014 Query 4612 GCGAACGTGAAGACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCG 4671 ||||||||||| |||||||| |||||| | ||||| || || ||| | ||||| ||||| Sbjct 17013 GCGAACGTGAAAACCATCGCCCACTGGATCCAGGCGTCGCGACAGATCATGGACGATGCT 16954 Query 4672 CCAATGCTTCAGTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAG 4731 || ||| ||||||||||| ||| |||| | ||||| || ||||| ||| |||||| Sbjct 16953 CCGGCGCTGCAGTCCTACATCAACTCCCGCATGATGTATGGGCTGGCGCTGGTGGAAGAA 16894 Query 4732 GGCCAGCTGCTGAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCA 4791 ||| |||| ||||| || || || || ||||| ||| | || | ||| ||| || Sbjct 16893 AATCAGATGCTAAACGGTGATGGGACTGGCGATAATCTGCAGGGCATTAACGTAGTCGCG 16834 Query 4792 ACCGCCTATGACACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCAC 4851 | || |||||| ||| |||| ||||| ||||| || || | |||||||| ||||||| Sbjct 16833 AACGACTATGAAACCGCGCTCAATGCTACCGGTGATACTGGTGCTGACATCCTCGCTCAT 16774 Query 4852 GCTATTTATCAGGTG------ACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAAC 4905 || || ||||||||| | ||| | ||| |||| ||| || |||| ||| Sbjct 16773 GCGATCTATCAGGTGTCTCTCAGCGAATTTGA----AGCG--GACGGCATTATCCTTAAC 16720 Query 4906 CCGCGCGACTGGCACAACATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGT 4965 ||| ||||||||| || || | |||| || | | ||| || ||| | || Sbjct 16719 CCGGCAGACTGGCACCGGATTGCTCTATTGAAGGATGCTAACGGCAATTACATCCTTGGC 16660 Query 4966 GGTCCTCAGGCATTCACCAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCG 5025 || || ||||| || || || | ||||||| | || || ||| | || | ||| Sbjct 16659 GGGCCGCAGGCGTTTGCCTCCAAGGTGCTGTGGGGGCTTCCGGTTGTTTCTACCACGGCC 16600 Query 5026 CAGGCCGCCGGCACCTTTACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGC 5085 || || | || ||||| || || || | || | | | || || ||||| |||||||| Sbjct 16599 CAAGCATCAGGTACCTTCACTGTTGGAGCGTTTGGTCTTGCGTCTCAGGTATGGGATCGT 16540 Query 5086 ATGGATGCCACCGTGGAAGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTG 5145 ||||||||||| | || | ||| | | || || || |||||||| |||||||||||| Sbjct 16539 ATGGATGCCACTATCGAGATCAGCAATCAGGATCGAGACAACTTCGTTAAAAACATGCTG 16480 Query 5146 ACCATCCTGTGCGAAGAGCGTCTGGCGCTGGCGCATTATCGCCC 5189 |||||||||||||||||||| |||| |||| |||||||| || Sbjct 16479 ACCATCCTGTGCGAAGAGCGCTTGGCATTGGCTCATTATCGTCC 16436 Score = 686 bits (760), Expect = 0.0 Identities = 1035/1453 (71%), Gaps = 49/1453 (3%) Strand=Plus/Minus Query 6975 CAGGACGACAACGTGGTCTATCCCTATGTGGTCTGGCAGAACATCACCGGTTCTCCAGAG 7034 ||||| ||||| |||||||||||||||| || ||||||||||||| |||||| || ||| Sbjct 14646 CAGGATGACAATGTGGTCTATCCCTATGCCGTTTGGCAGAACATCAGCGGTTCACCTGAG 14587 Query 7035 AACTACATTGCCCAGCGCCCTGACGCAGACTTTTTCACGCTGCAGGTGGATGCATATGCC 7094 |||||| | | | | ||||| ||| | ||| | |||||||||||| |||| |||||| Sbjct 14586 AACTACCTGGACAAACGCCCGGACACTGACAGCTACACGCTGCAGGTAGATGTGTATGCC 14527 Query 7095 GACACCGTGGATGAAGTGATTGCCGTGGCTACTGCGCTGCGGGATGCCATTGAGCCGCAC 7154 || || || | | | ||||||| || |||||||| |||||||||||||| ||| Sbjct 14526 GATACGGTCGCGTCTGCTACATCCGTGGCAACAGCGCTGCGTGATGCCATTGAGCCACAC 14467 Query 7155 GCGCATATCACGCGCTGGGGCGGACAGGAAAGAGACCCAGAAACAAAGCGCTATCGCTAC 7214 || | || || | |||||||| ||| | |||||||||||||||||||||||||| Sbjct 14466 GCCTACATTACCAGATGGGGCGGGCAGAGCCGCGACCCAGAAACAAAGCGCTATCGCTAT 14407 Query 7215 TCATTCGATGTTGACTGGATAGTCACTCGATAAACGT----ATTATTCAACC-ACCGGCC 7269 |||||||| ||||| |||||||| ||| ||| | | | |||||| ||||||| Sbjct 14406 TCATTCGACGTTGATTGGATAGTGCTTCGTTAACATTCCCAACTTTTCAACATACCGGCC 14347 Query 7270 TTGAGCCGGtttttttATGACCGGAGATAACAATGTCTGTATTGACGCAAGGTACGCAGC 7329 ||| |||||||||||||||||||||||| || |||||||||||||| ||||| || ||| Sbjct 14346 TTGCGCCGGTTTTTTTATGACCGGAGATCACCATGTCTGTATTGACACAAGGCACCCAGT 14287 Query 7330 TCTTTGTGCTCGTAAAAGGCAAGGTGAGCGAAGTTGAATGTATCACTGCATTTTCACCCG 7389 | | ||| |||| || ||| || |||||||||||||| ||||| |||| | |||| Sbjct 14286 TTTATGTCCTCGCCAACGGCGTTGTAAGCGAAGTTGAATGCATCACATCATTCACCCCCG 14227 Query 7390 GCAGCAATCCGGCTGACCAGATTGAAGACACCTGTCTTTCTGAACGCTTTGATCGCAGCT 7449 || | || || ||||||||||| ||||| |||||| | || ||| |||| || Sbjct 14226 GCGGTAACCCTGCTGACCAGATCGAAGATACCTGTTTAAGCGAGCGCAACAGCCGCACCT 14167 Query 7450 ATAAGCGTGGTCTTCGAACGCCTGGCA-CAGCATCACTGACGCTTAACGCTGATCCTAAA 7508 |||| ||||| || || || |||| |||| | | ||||| || |||||||| ||| Sbjct 14166 ATAAAAAAGGTCTGCGCACACC-GGCATCAGCTACCGTCACGCTGAATGCTGATCCAAAA 14108 Query 7509 AATACCAGCCACATCATGCTCTACAACCTGTCCATTTCGGACGACGAAGAGGATCAGGAC 7568 || |||||||| | ||||| | |||||| | || |||||||| |||| Sbjct 14107 AACGCCAGCCACCTGATGCTGCATAACCTGGCAGAATCTGACGACGA-----ATCA-CTG 14054 Query 7569 CTGACCTTCGCGATTGGATGGTCAGACGGAACCGCATCGCCAACTGCGGCTGAAAATGGT 7628 |||||||| || |||| ||| |||| || || |||||||| || | |||| Sbjct 14053 CTGACCTTTGCCGTTGGCTGGGCAGATGGTGAATCAGAACCAACTGCAGCAGCGCCTGGT 13994 Query 7629 GCATCCGGTGCAGTCGATGGCCTGGTGCTACCTGATAGCCGCACATGGTTCGTATTCAAA 7688 || | || || |||||| || || | ||||| || || ||||| || ||| || Sbjct 13993 GCTCCAAACGCTGTAGATGGCTTGCTGTTGCCTGACGATCGTACCTGGTTTGTTTTCCAA 13934 Query 7689 GGCTATGTGTCCGACTTCCCATTTGATTTTTCAGCAAACACGGTTGTTTCTACTTCTGCA 7748 ||||| || |||| |||||||| ||||| |||||||| || || || | || Sbjct 13933 GGCTACGTTACCGATTTCCCATTCGATTTCCAGGCAAACACAGTGGTGAGCACGACCGCG 13874 Query 7749 TCTATCCAGCGCTCCGGCTCTGCTGTATGGGTGCCAAAAG-TCGTGACCCCA--TAA--A 7803 |||| ||||| || || || | || ||||| ||||| | || | | || ||| | Sbjct 13873 ACTATTCAGCGTTCTGGTCCTTCCGTTTGGGTTCCAAAGGCTCAAGCCGGCAGCTAATCA 13814 Query 7804 AT--------CAGGGC----GGCAACGCCCTTATTAATCA-GGAT--TAA--TAATGAAA 7846 || | |||| || ||| | | | ||| ||| ||| |||||| Sbjct 13813 ATCTATCCGCCGGGGCCGAGTGCCCCGCGTTAACTTCTCATTGATGGTAACGACATGAAA 13754 Query 7847 TTAACACTTGATGCACTCAAGGAGTCCGGCGCGTTTACCGGTCGCCCGGTTGAGAAAGAA 7906 ||||| || || | | || || ||||| ||||||||||||||||| ||||||||| Sbjct 13753 TTAACTCTGGAATCGTTGAAAGAACATGGCGCCTTTACCGGTCGCCCGGTAGAGAAAGAA 13694 Query 7907 ATCACCTGGACGCAAGGCGATaaaaaaaTCACCGCGACCGTGTATGTTCGCCCGATGGGT 7966 |||||||||| ||| ||||| ||| || | || || || |||| ||| || || ||||| Sbjct 13693 ATCACCTGGAAGCAGGGCGAGAAAGAACTGACGGCAACGGTGTTTGTACGGCCTTTGGGT 13634 Query 7967 TATCACACAGCAACGTCCGATGTGCTGGCTTTTGGTGGTAAGGTCGATGGTGTGGCAGGG 8026 || |||| || || ||| | || || | ||||| || || ||||| || || || Sbjct 13633 TACTACACTGCGCGATCAGATATTCTCGCGGTAGGTGGAAAAGTTGATGGCGTTGCTGGT 13574 Query 8027 CGTATCGCCGCATCCATCTGCGATGAACATGGTAAACCCATCTTCACCCCGGCTGACATT 8086 || ||||| || || || || ||||| |||| | || | || ||||| || || || Sbjct 13573 CGCATCGCAGCTTCTATTTGTGATGAGAATGGCCAGCCAGTATTTACCCCTGCAGATATC 13514 Query 8087 ACTGGTGAGGCAGATCCTGAACGTGGTGCACTGGATGGCGGCCTGACGGTAGCACTGCTT 8146 ||||||||||| ||||| || |||||||| || ||||| | | || || || |||| Sbjct 13513 ACTGGTGAGGCGGATCCGGATCGTGGTGCGCTTGATGGTGCTTTAACAGTGGCTTTGCTG 13454 Query 8147 CTGGCCATTCAGGAAGTTAACGATCTGGGAAAGACTTCGAGC--TCAGCGCCGAAGACGA 8204 |||||||||| || || || | ||||||||||| |||| ||||||| || ||||| Sbjct 13453 GTGGCCATTCAAGAGGTCAATAACCTGGGAAAGAC--GGAGCCATCAGCGCAGACGACGA 13396 Query 8205 ATTCTGGTGCGAGCTCGTCCTCAACGGAATCGGAGGCAGAACAATCGCCGAAGCGCGGGA 8264 | ||||||||| | ||||| || || || || ||||| ||| | || || || | ||| Sbjct 13395 AGCCTGGTGCGAATTAGTCCTGAATGGTATTGGCGGCAGGACAGTGGCAGAGGCTCAGGA 13336 Query 8265 AGTCCTCTCA----TTCAAAGAGTCCCAACTCTGGGCAAAGTACCGGGAACGA-TACGGG 8319 | ||||| ||| |||| | || ||| ||||| | | ||| | | || Sbjct 13335 --GCGTCTCAGCCTTTC--TGAGTTTCGCCTGTGGATGAAGTATC-GTAACAAGTTTGGC 13281 Query 8320 AGTCTGAACCCTATGTTGCGGGTTGAGTGGGGTGCCGGGCTGGTGAGCAGCATGATAGCC 8379 ||||| ||||||||| ||||| |||||||||||||| ||||||| || | ||| || Sbjct 13280 AGTCTAAACCCTATGATGCGGACTGAGTGGGGTGCCGCGCTGGTGGCAAGTACGATCGCA 13221 Query 8380 AACGTTAACAGAG 8392 ||||| || |||| Sbjct 13220 AACGTCAATAGAG 13208 Score = 136 bits (150), Expect = 1e-27 Identities = 397/595 (67%), Gaps = 36/595 (6%) Strand=Plus/Minus Query 5791 GAGTGGATAAAAAAGTGGGCAAAAATAGCTTATGAACGAGCAACTGGTAAACGAACTGAT 5850 || ||| |||| || ||| | || || ||||| ||||||| |||||||| |||||| Sbjct 15786 GAATGGTTAAAGAACTGGTTGAGGATTGCCCATGAAAGAGCAACAGGTAAACGCACTGAT 15727 Query 5851 AGCAGTGATACGGGAACAAATCACAGCGCAGAGGGAGCAGACGGAAGCGATAAGCCGTCT 5910 ||||| | | |||| | | | || || ||| ||||| | ||| ||| ||| || Sbjct 15726 AGCAGCACTGCAGGAAGAGACGAAGGCAAAGCAGGAACAGACAGCAGCACTAACCCGCCT 15667 Query 5911 GGCTGAATCAAATATGGCGCTTTGCGATGTCATT----ATCCAGTC-GC--TGGCTGGTG 5963 |||||| || ||| || | || ||| || || || || || || | | | Sbjct 15666 GGCTGAGTCCAATGAATCGTTGGTCGCTGTTCTTGTTGATGCATTCAGCAATGACATGGG 15607 Query 5964 A-AC-TAGATG-------AAAC--TGCAGAGCAACAAACCTATCTGAGCGGTAAACCCAG 6012 | || | ||| |||| || ||||| |||| |||||| ||| || | | Sbjct 15606 AGACGTTGATATCATTAAAAACGATG-AGAGC--CAAAACTATCTCAGC----AATC--G 15556 Query 6013 GGGGTAAC-ATGCAGGCCGGGAAATTGCGCCACAGGATTACTCTGCAGGAGCCAGTAAAA 6071 ||||||| ||||||||||| || ||||||| | || || ||||| |||| || || Sbjct 15555 GGGGTAATTATGCAGGCCGGTAAGCTGCGCCATCGCATCACCTTGCAGAAGCCCGTTAAG 15496 Query 6072 GTGCAGAACCCGACAACGGGAGCCGTAATTAATACCTGGCGAGATGTTGCG--ACTGTCC 6129 |||||| | || ||| || | ||| |||| |||| ||| |||| ||| | Sbjct 15495 GTGCAGGATCCTGAAACTGGTTCAGTAGAAAATATATGGCAGGATCTTGCTCAACTTT-- 15438 Query 6130 GGGCCGAAGTTTCACCATTGTCAGCGCGTGAATTTATTGCTGCGCAGGCTTCTCAGGGTG 6189 ||||||| ||||| || | || || || || ||| | || || ||||| || || Sbjct 15437 GGGCCGAGGTTTCTCCGCTTTCTGCCCGAGAGTTTGTGGCCGCTCAGGCAATGCAAAATG 15378 Query 6190 AAATAACCACCCGTATTGTTATTCGCTACCGTGCCGGAGTTACCAG--AAAACATCGCAT 6247 | || || | ||| | | ||||||||| | || | | || |||| |||| || Sbjct 15377 CCGTCACTACAAGGATTACTGTCCGCTACCGT-CAAGACAT-CGAGCCAAAATATCGGAT 15320 Query 6248 CTTGTTTCGTGGTGCTGTGTATAACATCCATGGTGTTCTGCCCGATCCAAAAAGCGGACG 6307 |||||||| ||| | | ||||| | ||| || || ||||||| ||||| || | Sbjct 15319 ATTGTTTCGCGGTAAAATATTCAACATTGAAGGTATTTTGTCCGATCCGAAAAGTGGTCT 15260 Query 6308 TGAATACCTGACGCTTCCCTGTTCTGAGGGTGTTAATGATGGCTGATAGTGTTGA 6362 |||||| |||||| | || ||||| || || ||| |||||||||||| | ||||| Sbjct 15259 TGAATATCTGACGTTGCCATGTTCGGAAGGGGTTGATGATGGCTGATGGCGTTGA 15205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130148273342464