Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq14 147 7e-31 >seq14 Length=60807478 Score = 147 bits (162), Expect = 7e-31 Identities = 87/91 (96%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 36516 CTCACCAATAAAAAACGCCCGGAGGCAACCGAGCGTTCTGAACAAATCCAGATGGAATTC 36575 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 38780469 CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC 38780528 Query 36576 TGAGGTCATTACTGGATCAATCCACAGGAGT 36606 |||||||||||||||||| ||| |||||||| Sbjct 38780529 TGAGGTCATTACTGGATCTATCAACAGGAGT 38780559 Score = 147 bits (162), Expect = 7e-31 Identities = 87/91 (96%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 36516 CTCACCAATAAAAAACGCCCGGAGGCAACCGAGCGTTCTGAACAAATCCAGATGGAATTC 36575 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 38781986 CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC 38781927 Query 36576 TGAGGTCATTACTGGATCAATCCACAGGAGT 36606 |||||||||||||||||| ||| |||||||| Sbjct 38781926 TGAGGTCATTACTGGATCTATCAACAGGAGT 38781896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151197529392000