Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value seq477 1198 0.0 >seq477 Length=38297 Score = 1198 bits (1328), Expect = 0.0 Identities = 2065/2985 (69%), Gaps = 83/2985 (3%) Strand=Plus/Minus Query 2161 TTAACGATGAACGGATACTGCAAATTTCGACGGTTTGGCGCTGCGTGAGCCTGATTTCAA 2220 ||| ||||||||| | |||| || || |||||| ||| | || ||||| |||| Sbjct 19374 TTACCGATGAACGTAATATGCAGATCAGCACCGTTTGGTCTTGCATAAGACTGATATCAA 19315 Query 2221 CGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAACCGACCAGAATGACAACCGaaaaa 2280 | | || |||| | ||||| ||||| || ||||| | |||||| | || | | Sbjct 19314 CCGTGACAGCATCTCTCCCGCTAGATGTGTTTGAAACTGTT---AATGACCAACGTCAGA 19258 Query 2281 aaGTGGGTTTGAGCAATCCGCTGGCGCGACTGCTGCGCTACTCACCGAATCAGTACATGA 2340 |||| || ||||| |||||||| || ||||| | | || ||| | | |||| Sbjct 19257 AAGTCGGAAACGAAAATCCCCTGGCGCGCCTCCTGCGATTCCGTCCAAATAATTTTATGA 19198 Query 2341 CCGCCCAGGAATTCAGAGAGGCCATGACGATGCAGCTCTGTTTCTACGGCAACGCGTATG 2400 |||| | ||||| | || || ||||| ||||| |||||| || || || ||||| | Sbjct 19197 CCGCGCTTGAATTTCGCGAAGCGATGACAATGCAACTCTGTGCATATGGGAATGCGTACG 19138 Query 2401 CACTGGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTTCAGTCTGCCA 2460 | | || || || || |||| ||||| ||||||||| | | ||| | | |||| Sbjct 19137 CCCACGTTGAGCGAAATAGCGTTGGTGATGTGATCAGCATGGTTCCGTTAATGAGCGCCA 19078 Query 2461 ATATGGATGTGAAACTC-GT-----CGGaaaaaaaGTGGTTTATCGCTATCAACGCGACA 2514 ||||||||||| |||| || ||| ||||| || |||| |||||| |||| || | Sbjct 19077 ATATGGATGTGCGACTCAGTGATAACGGCAAAAACGTTATTTACCGCTATAAACGAGATA 19018 Query 2515 GCGAATACGCCGACTTTTCGCAGAGAGAGATTTTTCACCTTAAATGCTTCGGATTCACCG 2574 |||||||| ||||| || | ||| ||||| || || ||| | || || || | || Sbjct 19017 CGGAATACGCAGACTTCAAGCCTAAAGAAATTTTCCATCTGAAAGGTTTTGGTTTTAACG 18958 Query 2575 GGCTGGTCGGCCTGTCCCCCATTGCTTTTGCCTGT---AAATCGGCAGGTGTGGCAGTTG 2631 | || || || ||||| || | || || | || |||||||| |||||||| | | Sbjct 18957 GTCTAGTGGGGCTGTCTCCGTTGGCCTT---CAGTGCGAAATCGGCCGGTGTGGCGATCG 18901 Query 2632 CGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTCT 2691 | ||||| ||| | ||||| || || ||||| || ||||||||||| |||||||| || Sbjct 18900 CTATGGAAGACAATCAGCGCGAGTTTTTTGCTAATGGCGCCAAGTCACCGCAAATTCTGA 18841 Query 2692 CAACCGGCGAAAAAGTGCTAACTGAACAGCAGCGCTCGCAGGTCGAAGAGAACTTCAAAG 2751 || | | || ||||| ||| || | ||||| || | ||||| |||||||| | Sbjct 18840 TGACAGATGGCAAGGTGCTTACTAAAGATCAGCGTGGACAACTGGAAGAAAACTTCAAGG 18781 Query 2752 AGATCGCCGGCGGTCCGGTTAAAAAACGCCTCTGGATTCTGGAAGCGGGCTTTTCCACAT 2811 ||||||||||||| || |||||||| ||||| |||||||||||| || ||| |||| Sbjct 18780 AGATCGCCGGCGGCCCAGTTAAAAAGCGCCTTTGGATTCTGGAAAGTGGATTTACCACTC 18721 Query 2812 CGGCAATTGGCGTAACGCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAGGTAA 2871 ||| || || || | || |||| | ||||| | | | || || ||||||||| Sbjct 18720 AGGCTATAGGGATATCTCCAGCGGATTCTCAAATGCTTGAAGCGCGTAAGTTTCAGGTAG 18661 Query 2872 GTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAATCAA 2931 ||||||||||| || | ||| || ||||||||||| || || || ||||||||| ||| Sbjct 18660 CCGAACTGGCGCGCTTTTATGGTGTCCCGCCTCACCTGGTAGGGGATGTCGAGAAAACAA 18601 Query 2932 CGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTGCAGC 2991 | ||||| || || || || || || ||||| ||||||||||||||| | | | Sbjct 18600 CTTCATGGGGTAGCGGTATTGAACAACAAAACCTCGGATTCCTGCAGTACACCTTAAAAC 18541 Query 2992 CCTATATCTCCCGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGATGTTG 3051 | ||| | || |||||| |||| ||| |||| ||| | | | | ||| | Sbjct 18540 CTTATCTTGATCGCTGGGAATACAGTATTGAGCGCTGGTTGGTAAAAGATGCCGATCAGG 18481 Query 3052 GCCGCATTCATGCTGAGCACAATCTCGACGGCCTGCTGAGGGGCGATTCGGCATCCCGCG 3111 || | |||||||||||||| ||| | ||||| || ||| | || |||||| || ||||| Sbjct 18480 GCAGGATTCATGCTGAGCATAATTTAGACGGTCTACTGCGCGGTGATTCGACAAGCCGCG 18421 Query 3112 CTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAAATGCGACGAA 3171 | | || ||| | |||||| | | || | |||||| |||||||| | | ||| Sbjct 18420 CCTCTTTCATGCAAACAATGGTGAATACTGGTATTCGCACCGTCAACGAAGTCAGGCGAC 18361 Query 3172 CGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATACGTGC 3231 ||| ||| | || || | || || || ||||| || | ||||||||||| |||| | Sbjct 18360 TGGATAACTTGCCACCGCTTCCCGGCGGAGATGTAGCGACACGCCAGTCGCAGAACGTAC 18301 Query 3232 CGATCACCGATTTAGGAACCAACAAAGAGCCCCGTAATAACGGGGCTTAATTTTTATGGG 3291 | || |||||| | |||| | |||||||||||| | | ||||||||||||||||||||| Sbjct 18300 CCATTACCGATCTCGGAAGAACCAAAGAGCCCCGCACTGACGGGGCTTAATTTTTATGGG 18241 Query 3292 GGCCGTAATGCCTGAGATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCAAATTCAC 3351 |||| | |||||||| || ||||| ||| | |||||| |||||||||| || || || Sbjct 18240 GGCCATGATGCCTGATATTCAGAAAACCCTGGCGTTCGACCAGACAGAAATAAAGTTTAC 18181 Query 3352 CGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACACCGATTC 3411 ||| |||||| | | || | |||||| ||||||||||| ||||| || || || || || Sbjct 18180 CGGCGACGGTGATAAAGGCACTTTTGAGGGCTACGCCTCAGTTTTCAACAATACGGACTC 18121 Query 3412 CGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCACTGGCGAACCAGACCCGCAA 3471 ||| || ||||| || ||||| || || || | | | || || | ||| || Sbjct 18120 CGACGGAGACATTATCCTGCCAGGTGCATTCAGCGGTGTTATTGCTGGTCAAAGCCGAAA 18061 Query 3472 AGTGGCGATGTTTTTCAACCACAAGACGTGGGAGCTGCCGGTTGGTAAATGGGACAGCCT 3531 || || ||||| || ||||| ||||| | | | | || |||||||||||||| | | Sbjct 18060 GGTCGCCATGTTCTTTAACCATCAGACGCGCGCGATCCCTGTTGGTAAATGGGATTCCAT 18001 Query 3532 GGCAGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGGCACAGCGGCGC 3591 | || ||||| ||||| |||| ||| ||||||||||| || ||||| | || | Sbjct 18000 GCATGAGGACGATAAAGGGCTGTTTGTTCGCGGTCAACTCACGCCAGGACTTAGTCTGTC 17941 Query 3592 CGCCGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTGGCTTTTC 3651 | |||||||||||||||||| | ||||| || |||||||||||||| || || || || Sbjct 17940 TGAGGACCTGAAAGCGGCAATGAAACACGGCACCGTTGAAGGTATGTCAGTCGGTTTCTC 17881 Query 3652 CGTTGCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATATCCAGGC 3711 ||| | || ||||| || || | | |||| |||||| || || || Sbjct 17880 CGTCGGCCCCGATGATTATACAGTCGGCACTTCCGGCCTCATTTTCAAAAACATTTCTTA 17821 Query 3712 TCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCGCAGCCAT 3771 |||||| |||||||| |||||||||||||| |||||||| | ||||||| | | ||||| Sbjct 17820 TCTGCGGGAAATCAGTGTCTGCACTTTCCCGGCCAACGAGCTGGCTGGCGTGACCGCCAT 17761 Query 3772 GAAAAGTGTCGATGGCATTGAAACGATCCGTGATGTTGAGAACTGGCTGAGGGATTCAGT 3831 ||||||| |||| ||||| |||| || ||||| | || |||||||||||||||||| Sbjct 17760 GAAAAGTATCGACGGCATCAAAACCATTCGTGACGCGGAAGCCTGGCTGAGGGATTCAGT 17701 Query 3832 CGGCCTCACCAAATCACAGGCAGTAGG-GCTAATAGCCCGGTTTAAGTCAGCGATTCGGA 3890 ||| | ||| || | || | ||| | || ||||| ||||||| || |||| Sbjct 17700 CGGTTTGACCCGCTCTGAAGC-GCAGGCATTTATTGCCCGCGTTAAGTCCGCAGGCCGGA 17642 Query 3891 GCGAGTCCGAGGGCGACGGAAACGAAGCACAAATCAACGCTCTGCTTCAGAGCATCAAAT 3950 ||||||||| ||| || | || |||| ||| ||| |||| || | Sbjct 17641 GCGAGTCCGGTAGCGGCG------------ACATTGACGCGCTGGCACAGCGCATAAACT 17594 Query 3951 CTTTCCCTTCTAATTTAGGTAAT---TAA---------TTATGTCTGAACTCG-CTCTCA 3997 | || | ||||| | | ||| ||| |||||||||| | | | ||| Sbjct 17593 CATTTGCCGCTAATCTGCGGAATGCATAACGGAGCACCATATGTCTGAATTAGCCACTC- 17535 Query 3998 TTCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGTCTCAACTTTTCGATGCGCAG---- 4053 | ||||||| || || | ||||| | || | |||| |||| | ||| Sbjct 17534 TCGAAAAAGCGATTGAGAATTCCCAAAAAGAAGTTAAGGAACTCATCGAAGAACAGCGTA 17475 Query 4054 AAAGCAGAAATCGAAAGCACTGGCCAGGTTTCCAAACAGCTGCAGTCCGACCTGGCAAAA 4113 || || |||| || || ||| | || || | |||||| |||| ||| | ||| Sbjct 17474 AATCCATCAATC---AGAAC-GGCGAAATTAACACGAAACTGCAGGCCGATCTGACCAAA 17419 Query 4114 GTGCAGGAAGAACTGACCAAATCCGGTGCGCGTCTCTTCGATCTGGAACAGAAACTGGCT 4173 | |||||||| |||| | |||| | || || |||||||| || || ||||| ||| Sbjct 17418 GCTCAGGAAGAGCTGAAGACCACCGGCACTCGCCTGTTCGATCTTGAGCAAAAACTTGCT 17359 Query 4174 TCCGGT-GCTGA--AAATCCGGGTGAGAAGAAATCCTTCTCTGAACGTGCTGCGGAAGAG 4230 ||| || | ||| | || | | || || || | || || | | ||||| Sbjct 17358 ---GGTAACTCACCGGATCAGACTGCGCAAAAGTCATTTGCCGAGCGCGTGTCCGAAGAC 17302 Query 4231 CTCATCAAGTCATGGGACGGTAAACAGGGCACCTTCGACGCGAA------GACGTTTAAC 4284 || || || ||||| || | |||| | | ||||| | ||| | Sbjct 17301 CTGATGAAAGGCTGGGATGGCTCCC---GCAC---CAAAGCGAAAGTTACCAGCTTTGAT 17248 Query 4285 AAGTCTCTCGGCAGTGACGCTGATTCTGCTGGCTCACTGATCCAGCCGATGCAGATCCCC 4344 || | |||| | ||| | || || || | ||| |||||||| ||| || || Sbjct 17247 AAAGCGATCGGTTCCGGCGCAGCGTCAGCGGGTGCCCTGGTCCAGCCGCAGCAAATGCCA 17188 Query 4345 GGCATCATCATGCCAGGACTGCGCCGTCTGACCATTCGTGACCTGCTGGCGCAGGGCCGC 4404 || || | |||||||| ||||| ||||||||| |||||||||| ||||| || ||||| Sbjct 17187 GGTATTCTGATGCCAGGGCTGCGTCGTCTGACCGTTCGTGACCTTCTGGCACAAGGCCGT 17128 Query 4405 ATCTCCAGCAACGCTCTGGAATACGTCCGTGAAGAGGTGTTTACCAATAACGCCGACGTG 4464 || |||| ||||| ||||||||||| ||||| | ||||| ||| ||||| | | | Sbjct 17127 ATTACCAGTAACGCGCTGGAATACGTGCGTGAGAATGTGTTCACC---AACGCTGCTGCG 17071 Query 4465 ---GTGGCCGAGAAAGCGCTGAAGCCCGAATCGGATATCACCTTCAGTAAGCAAACCGCG 4521 ||||| || | || ||||| ||| | |||||||||| || |||| ||| Sbjct 17070 CCAGTGGCGGAAGGCACCCTCAAGCCTGAAAGTAACATCACCTTCACCAAAGAAACGGCG 17011 Query 4522 AACGTGAAGACGATCGCCCACTGGGTGCAGGCATCGCGTCAGGTTATGGACGATGCGCCA 4581 |||||||| || |||||||||||| | ||||| ||||| ||| | ||||||||||| || Sbjct 17010 AACGTGAAAACCATCGCCCACTGGATCCAGGCGTCGCGACAGATCATGGACGATGCTCCG 16951 Query 4582 ATGCTGCAGTCATACGTCAACAACCGCCTCATGTACGGCCTGGCGCTGAAGGAGGAAGGT 4641 ||||||||| ||| ||||| |||| | ||||| || ||||||||| ||| ||| | Sbjct 16950 GCGCTGCAGTCCTACATCAACTCCCGCATGATGTATGGGCTGGCGCTGGTGGAAGAAAAT 16891 Query 4642 CAACTGCTGAACGGTGACGGTACCGGGGATAACATCGAAGGTTTGAACAAAGTGGCCACC 4701 || |||| |||||||| || || || ||||| | | || | ||| ||| || | | Sbjct 16890 CAGATGCTAAACGGTGATGGGACTGGCGATAATCTGCAGGGCATTAACGTAGTCGCGAAC 16831 Query 4702 GCTTACGACACCTCGCTGAATGCCACTGGCGACACCCGCGCTGACATTATCGCTCACGCT 4761 | || || ||| |||| ||||| || || || || | |||||||| ||||||| || Sbjct 16830 GACTATGAAACCGCGCTCAATGCTACCGGTGATACTGGTGCTGACATCCTCGCTCATGCG 16771 Query 4762 ATTTATCAGGTGACAGAGTCT----GAGTTTAGCGCTTCCGGTATTGTCCTGAACCCGCG 4817 || ||||||||| | ||| || ||| || ||| ||| |||| |||||| Sbjct 16770 ATCTATCAGGTGTC----TCTCAGCGAATTTGAAGCGGACGGCATTATCCTTAACCCGGC 16715 Query 4818 GGACTGGCACAACATCGCGCTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCC 4877 ||||||||| || || || |||| || | | ||| || ||| | || || || Sbjct 16714 AGACTGGCACCGGATTGCTCTATTGAAGGATGCTAACGGCAATTACATCCTTGGCGGGCC 16655 Query 4878 TCAGGCGTTTACCAGCAACATCATGTGGGGCCTGCCAGTGGTTCCGACTAAGGCGCAGGC 4937 ||||||||| || ||| | ||||||| || || || ||| | || | ||| || || Sbjct 16654 GCAGGCGTTTGCCTCCAAGGTGCTGTGGGGGCTTCCGGTTGTTTCTACCACGGCCCAAGC 16595 Query 4938 CGCCGGCACCTTTACGGTGGGCGGTTTCGATATGGCCTCTCAGGTCTGGGATCGCATGAA 4997 | || ||||| || || || | || | | | || |||||||| |||||||| ||| | Sbjct 16594 ATCAGGTACCTTCACTGTTGGAGCGTTTGGTCTTGCGTCTCAGGTATGGGATCGTATGGA 16535 Query 4998 TGCCACCGTGGAAGTCAGCCGTGACGACCGCGACAACTTCGTGAAAAACATGCTGACCAT 5057 |||||| | || ||||| | | || || ||||||||||| ||||||||||||||||| Sbjct 16534 TGCCACTATCGAGATCAGCAATCAGGATCGAGACAACTTCGTTAAAAACATGCTGACCAT 16475 Query 5058 TCTGTGCGAAGAGCGCCTGGCGCTGGCGCACTATCGCCCGGCGGC 5102 ||||||||||||||| |||| |||| || ||||| || || || Sbjct 16474 CCTGTGCGAAGAGCGCTTGGCATTGGCTCATTATCGTCCTGCTGC 16430 Score = 271 bits (300), Expect = 2e-68 Identities = 326/443 (74%), Gaps = 0/443 (0%) Strand=Plus/Minus Query 28467 TTAAGGCAGCCGCCAGCCCCTGTAGGTTAGAGCCACCAGGTTCATAATCACCAGACTCCC 28526 ||| |||||| || || |||| ||||| |||||||||| ||| || || ||||||| Sbjct 31322 TTAGGGCAGCGGCTAGAGCCTGGAGGTTCTCACCACCAGGTTTATAGTCGCCTGACTCCC 31263 Query 28527 ATCCTGTAACCGTTACTCGGTTTACGCCTACCAGCTTGGCGAGAACAGCCTGGGTGAGCT 28586 | || || || || || || || || |||| ||||||| | |||| || |||| Sbjct 31262 AGCCAGTGACGGTGACACGATTGACCCCTATGCGCTTGGCTAAGGTGTCCTGAGTTAGCT 31203 Query 28587 TCAGCTCTTTGCGTCTTGCGCGGATGCGTTCATTCATTTTCATGTAGGCAATCCTACCAT 28646 | | |||||||||||||| || || || |||||||||| |||||||||||||||||||| Sbjct 31202 TTAACTCTTTGCGTCTTGATCGAATTCGGTCATTCATTTCCATGTAGGCAATCCTACCAT 31143 Query 28647 TTTATGATGTAGGAATCCTTGACCTCTTAATGTAAGATATCCTACTATCATGATGTGTGT 28706 || ||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct 31142 TTAGCAGTGTAGGATTCCTTGACTCTTTAATGTAAGATATCCTACTATCCAAGTGTTCCA 31083 Query 28707 TTCCCTTACATTTGAGGCaaaaatgaaaaaaGATGATGTGGTTTCTTACTTCGGCAGCGT 28766 ||||||||| ||| | ||||||||||||||||| |||| ||||||| | || Sbjct 31082 TTCCCTTACCAAAGAGTGAGCCATGAAAAAAGATGATGTTATTTCGTACTTCGATGGGGT 31023 Query 28767 GGGGAACGTAGCGAAGGCATTAGGAATTTCCCATGCATCGGTTTCTGGGTGGGGTGAAGT 28826 ||| || ||| ||||||||||| | || ||||| || || || || ||||| || | Sbjct 31022 GGGCAAAACAGCCAAGGCATTAGGGCTGTCGCATGCCTCCGTATCGGGTTGGGGGGAGAT 30963 Query 28827 AATCCCAAAAGGTAGGGCATTTGAGATTCAGGCACTGACTTCTGAAAAGCTGAAAGTCGA 28886 || || |||||| | ||||| ||||| |||| | ||| || | |||||||| || Sbjct 30962 TATTCCCAAAGGTCGAGCATTCGAGATCCAGGTTATTACTGGTGGTGAACTGAAAGTTGA 30903 Query 28887 TCCATCCCTTTACGCAAAGCCTA 28909 || || |||||| |||| ||| Sbjct 30902 TCTCTCTCTTTACAAAAAGTCTA 30880 Score = 127 bits (140), Expect = 5e-25 Identities = 319/478 (67%), Gaps = 35/478 (7%) Strand=Plus/Minus Query 35115 TGAGGCACTAATGAACCAATCACAATTTCAAAAGGCGGCTGGGCTAAGCGCCGAGTTAGC 35174 |||||| ||||| ||| |||||||| ||||||||| | ||||||| |||||| Sbjct 24231 TGAGGCCACAATGACACAAAACGAATTTCAATGGGCGGCTGGTATCAGCGCCGGGTTAGC 24172 Query 35175 TGCGCGCTGGTTTCA------GCCAGTCACCGATGCGATGAAAGAATTCGGCATTACCAA 35228 ||||||||||| || || | |||| ||| || ||| || || Sbjct 24171 TGCGCGCTGGTATCCTCATCTGCTCGCCACCTTTGCT------GAGTTCTCAATCGAGAA 24118 Query 35229 GCCGGTAGACCAGGCCATGTTCATTGCGCAGGTTGGGCATGAATCAGCTGGCTTCACTCT 35288 ||| | | ||||| ||||| ||||| |||||||||||||||||||||||||| || | Sbjct 24117 GCCAGCGGCACAGGCAATGTTTATTGCTCAGGTTGGGCATGAATCAGCTGGCTTTACCCG 24058 Query 35289 CCTGGTGGAGAGCTTCAATTACCGGATTGCCGCACTAGTTAACTTCA---TTCGTGCAGG 35345 | ||| |||||| | || ||| | || || || |||| || | | || Sbjct 24057 CACGGTAGAGAGCCTGAACTACACG----CCACAGGGATTGCTTTCAACCTTTGGGAAG- 24003 Query 35346 ACGCCTTACCGCAGAACAGGCAAACGCGTTAGGCCGCCGCCCTGAAGAACGGACATTACC 35405 ||| | || | | ||||| | | | || || | ||||| || ||| Sbjct 24002 -CGCATCACTCCCTATCAGGCTGGCATGCTTGGACGT--------ACAACGG-CAC-ACC 23954 Query 35406 GATTGAGCGCCAGCGAGCCATTGCGAACCTGGTATACAGCAAACGCATGGGTAACAACGC 35465 | | ||||| || ||||| |||||||||||| | | ||| |||| || || | Sbjct 23953 --TGGCAAACCAGCCGGCGATTGCAAACCTGGTATACGCCGATCGCCTGGGCAATAAATC 23896 Query 35466 ACCCGGCGACGGCTGGTTATACCGTGGGCGTGGGCTTATCCAGATTACCGGCCTCAACAA 35525 || ||| || |||||| ||| |||||||||||||| || ||| ||||||||| |||| Sbjct 23895 ACGCGGTGATGGCTGGAAATATCGTGGGCGTGGGCTGATTCAGGTTACCGGCCAGGACAA 23836 Query 35526 CTACCGTGATTGTGGAAACGGCCTGAAAGTTGATCTGGTTAAGCAA-CCTCAGTTGCT 35582 |||||| | || || | | |||||| | || |||||| |||| ||||| |||| Sbjct 23835 CTACCGAGCGTGCGGTATTGCGCTGAAACTCGACCTGGTT-GGCAATCCTCAACTGCT 23779 Score = 107 bits (118), Expect = 5e-19 Identities = 137/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 32677 CCAAAGCGTCGCCGCTGGGAGAACGATAAGTACACCCGCTGGGTTAAGTCGCAGAAGTGC 32736 ||||||||| |||||| | || |||| ||||| ||||||||||| ||| ||| Sbjct 26195 CCAAAGCGTGAGCGCTGGACCAGTGAGAAGTTTACCCGTTGGGTTAAGTCTCAGCCATGC 26136 Query 32737 AGTTGCTGC--AATAACCCGGCAGACGATCCCCACCACCTGATAGGCCACGGGCAGGGTG 32794 |||||| | |||| | ||||| ||||| ||| | || |||||||| ||||||| Sbjct 26135 GCATGCTGCGGAGCAACCTCG--GACGACCCCCATCACATCATTGGCCACGGACAGGGTG 26078 Query 32795 GAATGGGTACCAAAGCGCACGACCTGTTTGTGATACCGCTGTGCAGAGCGCATCACGATG 32854 | ||||| ||||| |||||||| | || || || || |||||| |||||||||| Sbjct 26077 GCATGGGAACCAAGGCGCACGATTTTTTAACCATCCCACTTTGCAGAAAACATCACGATG 26018 Query 32855 AGTTGCA 32861 | ||||| Sbjct 26017 AATTGCA 26011 Score = 89.7 bits (98), Expect = 1e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 30844 AAACCTATTTGTCCGGTTGCGCCGCAACCAGACGGTGATGTGTTGATCACCGATCAGGCT 30903 ||||||| ||||| | ||| |||| | ||| ||| ||||||||||| || || || Sbjct 29629 AAACCTACTTGTCAGCCTGCTGCGCAGACCGACCCTGAAGTGTTGATCACTGACCAAGCG 29570 Query 30904 AAACAGGTTTTGACCCATCTGAACCAGGTGACCAGTTCGCGTTATCAGGTCTCAACCACT 30963 || ||||||| | || ||||||| ||||| |||| || |||||| ||| | || Sbjct 29569 AAGGAGGTTTTAAAACACCTGAACCTTGTGACTGGTTCCCGCTATCAGACCTCGAAAACC 29510 Query 30964 TCGCTGCAAAACATTCGTGCCCGAATTGGGGAAGGTTACACCGT 31007 || ||| ||||||| || || || ||| | || || | ||| || Sbjct 29509 TCACTGGAAAACATCCGGGCACGCATTCGCGATGGGTTCACTGT 29466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127969108950592