Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_020490.2 Length=44714 Score E Sequences producing significant alignments: (Bits) Value seq137 358 2e-94 >seq137 Length=409738 Score = 358 bits (396), Expect = 2e-94 Identities = 641/926 (69%), Gaps = 19/926 (2%) Strand=Plus/Minus Query 18013 TTATAAACGATGTGCCAGCCGATGACTGA-----TAAAACGTTA--AGCATTACAAAAAC 18065 |||| ||||||||||| ||||| ||| || ||||||| || | || | || Sbjct 13674 TTATTGACGATGTGCCACAGGATGA-TGACGATGTATAACGTTATTAGTACTAAAGAACT 13616 Query 18066 AATCGGTGGTGGTTACAACAAATTCTGGCATAACAAAAACTTTTACAGAGTGGTAAAAGG 18125 || || ||||| ||||| ||||||||| ||| ||||| || ||||| ||||| Sbjct 13615 TATTGGCGGTGGATACAATCGTTTCTGGCATTGCAAGAACTTCTATAGAGTTTGCAAAGG 13556 Query 18126 CTCTAGGGGTAGTAAAAAGAGTAAGACAACTGCACTAAACTTTATATACAGATTAATGGA 18185 ||| | ||| ||| ||| ||| ||||||| | ||||||| | | || | ||| | Sbjct 13555 TTCTCGTGGTTCTAAGAAGTCTAAAACAACTGTATTAAACTTCGTTAAACGAATCATGCA 13496 Query 18186 ATATGAATGGGCTAACTTGCTTGTAGTTAGACGTTTTAGTAATACAAACAAACAATCAAC 18245 || |||||||| | || || ||| | | | |||||| || ||||| Sbjct 13495 GTACCCCTGGGCTAATCTCCTAGTGGTTCGTAGATACTCCAATACATTAAAGCAATCTTG 13436 Query 18246 ATATACAGACTTAAAGTGGGCTACAAACCAATTAGGTGTGGCTCACTTATTTAAGTTTAA 18305 || || || ||||| ||||| | ||| ||| || || || ||||||||| || Sbjct 13435 TTACACTGATTTAAAATGGGCCATTAACAGATTGGGAGTAAAAGACCAATTTAAGTTCAA 13376 Query 18306 CGATAGTTTACCAGAGATTACTTACAAACCGACTGGCCAAAAAATATTATTCAGAGGGCT 18365 || | |||||||| || || ||||| ||||| || || ||||| || |||| | Sbjct 13375 TGAGTCAATGCCAGAGATAACATATAAACCTACTGGACAGAAGATATTGTTTCGAGGATT 13316 Query 18366 TGATGATCCATTAAAGATTACATCAATCACAGTTGACAAAGGAATATTAAGTTGGTGTTG 18425 ||||||||||| || || ||||| || || ||||| || | || | ||| ||| Sbjct 13315 AGATGATCCATTGAAAATAACATCTATTACTGTTGATGTGGGTAATTTGTGCTGGGCTTG 13256 Query 18426 GATAGAAGAAGCATATCAAGTTGAA-ACCTACGATAAATTCGCAACACTTGTTGAGTCTA 18484 | | || ||||| || || | ||| ||| || |||| || | |||| ||||||| |||| Sbjct 13255 GTTTGAGGAAGCTTACGAAATAGAAGACCAAC-ATAAGTTTGAAACAGTTGTTGAATCTA 13197 Query 18485 TTCGTGGTAGTGTTGACAGTCCTAACTTTTTTAAACAAATTACAGTTACATTCAACCCAT 18544 |||||||| | |||| |||| |||| ||||||||||| |||||||| || ||||| | Sbjct 13196 TTCGTGGTTCTTTTGATGCTCCTGACTTCTTTAAACAAATCACAGTTACTTTTAACCCTT 13137 Query 18545 GGAGTGAACGTCATTGGCTTAAACCTACATTCTTTGATGAAGATACACGATTAAACAATA 18604 |||||||| |||||||||||| || ||||||||||||| ||||| | | | | Sbjct 13136 GGAGTGAAAACCATTGGCTTAAATCTTATTTCTTTGATGAAGCTACACAAGCTTATGACA 13077 Query 18605 CATTTTCATACACGACAACATTTCGAGTGAATGAATGGCTTGATGATGTCGATATTGCAC 18664 | || | | || || || | | | ||||| ||||| ||||| |||| |||| Sbjct 13076 CGTTCGCCTTTACTACTACTTATAAATGCAATGAGTGGCTAGATGAACAGGATAGAGCAC 13017 Query 18665 GTTATGAGGACTTGTATCGTACAAACCCTAGACGTGCAAGAATTGTTTGTGATGGTGAAT 18724 |||||||| || ||| || ||||| |||||||||||||| ||||||||||| |||| Sbjct 13016 GTTATGAGAGTTTATATACTAAGAACCCAAGACGTGCAAGAATCGTTTGTGATGGCGAAT 12957 Query 18725 GGGGCGTAGCTGAAGGACTTGTATTTGATAACTTCGAAGTGAAAGAGTTTGA-CTGGTTG 18783 ||||||| ||||| || ||||||| ||| |||||| |||| ||| ||||| | | || Sbjct 12956 GGGGCGTTGCTGATGGTCTTGTATATGAAAACTTCCAAGTACGAGACTTTGATATTGATG 12897 Query 18784 AAAGTATTCAAACGGACACA---AGAAAAAGCTCACGGAAGCGATTTCGGATTTACTCAC 18840 | | || |||| | | | | ||| ||| || ||| || || | ||| || Sbjct 12896 AGA-TAAGACAACGAAAAGATGTACAAAGTGCTTTTGGTCTCGACTTTGGTTATACGAAC 12838 Query 18841 GATCCGACTACATTGATTAGTACCGTTGTAGACATGAAGAA--CAAAGAATTATGGATAT 18898 ||||| ||| |||||| | || | | || || | ||||| || | ||||| ||| Sbjct 12837 GATCCAACTGCATTGACTTGTTCTTTAGTTGATTTAAAGAATGAAACTATTTATG--TAT 12780 Query 18899 ACGACGAACACTATGAAAAAGGTATG 18924 ||| |||||| | ||||||||||| Sbjct 12779 TCGATGAACACAGTCAAAAAGGTATG 12754 Score = 358 bits (396), Expect = 2e-94 Identities = 641/926 (69%), Gaps = 19/926 (2%) Strand=Plus/Minus Query 18013 TTATAAACGATGTGCCAGCCGATGACTGA-----TAAAACGTTA--AGCATTACAAAAAC 18065 |||| ||||||||||| ||||| ||| || ||||||| || | || | || Sbjct 56632 TTATTGACGATGTGCCACAGGATGA-TGACGATGTATAACGTTATTAGTACTAAAGAACT 56574 Query 18066 AATCGGTGGTGGTTACAACAAATTCTGGCATAACAAAAACTTTTACAGAGTGGTAAAAGG 18125 || || ||||| ||||| ||||||||| ||| ||||| || ||||| ||||| Sbjct 56573 TATTGGCGGTGGATACAATCGTTTCTGGCATTGCAAGAACTTCTATAGAGTTTGCAAAGG 56514 Query 18126 CTCTAGGGGTAGTAAAAAGAGTAAGACAACTGCACTAAACTTTATATACAGATTAATGGA 18185 ||| | ||| ||| ||| ||| ||||||| | ||||||| | | || | ||| | Sbjct 56513 TTCTCGTGGTTCTAAGAAGTCTAAAACAACTGTATTAAACTTCGTTAAACGAATCATGCA 56454 Query 18186 ATATGAATGGGCTAACTTGCTTGTAGTTAGACGTTTTAGTAATACAAACAAACAATCAAC 18245 || |||||||| | || || ||| | | | |||||| || ||||| Sbjct 56453 GTACCCCTGGGCTAATCTCCTAGTGGTTCGTAGATACTCCAATACATTAAAGCAATCTTG 56394 Query 18246 ATATACAGACTTAAAGTGGGCTACAAACCAATTAGGTGTGGCTCACTTATTTAAGTTTAA 18305 || || || ||||| ||||| | ||| ||| || || || ||||||||| || Sbjct 56393 TTACACTGATTTAAAATGGGCCATTAACAGATTGGGAGTAAAAGACCAATTTAAGTTCAA 56334 Query 18306 CGATAGTTTACCAGAGATTACTTACAAACCGACTGGCCAAAAAATATTATTCAGAGGGCT 18365 || | |||||||| || || ||||| ||||| || || ||||| || |||| | Sbjct 56333 TGAGTCAATGCCAGAGATAACATATAAACCTACTGGACAGAAGATATTGTTTCGAGGATT 56274 Query 18366 TGATGATCCATTAAAGATTACATCAATCACAGTTGACAAAGGAATATTAAGTTGGTGTTG 18425 ||||||||||| || || ||||| || || ||||| || | || | ||| ||| Sbjct 56273 AGATGATCCATTGAAAATAACATCTATTACTGTTGATGTGGGTAATTTGTGCTGGGCTTG 56214 Query 18426 GATAGAAGAAGCATATCAAGTTGAA-ACCTACGATAAATTCGCAACACTTGTTGAGTCTA 18484 | | || ||||| || || | ||| ||| || |||| || | |||| ||||||| |||| Sbjct 56213 GTTTGAGGAAGCTTACGAAATAGAAGACCAAC-ATAAGTTTGAAACAGTTGTTGAATCTA 56155 Query 18485 TTCGTGGTAGTGTTGACAGTCCTAACTTTTTTAAACAAATTACAGTTACATTCAACCCAT 18544 |||||||| | |||| |||| |||| ||||||||||| |||||||| || ||||| | Sbjct 56154 TTCGTGGTTCTTTTGATGCTCCTGACTTCTTTAAACAAATCACAGTTACTTTTAACCCTT 56095 Query 18545 GGAGTGAACGTCATTGGCTTAAACCTACATTCTTTGATGAAGATACACGATTAAACAATA 18604 |||||||| |||||||||||| || ||||||||||||| ||||| | | | | Sbjct 56094 GGAGTGAAAACCATTGGCTTAAATCTTATTTCTTTGATGAAGCTACACAAGCTTATGACA 56035 Query 18605 CATTTTCATACACGACAACATTTCGAGTGAATGAATGGCTTGATGATGTCGATATTGCAC 18664 | || | | || || || | | | ||||| ||||| ||||| |||| |||| Sbjct 56034 CGTTCGCCTTTACTACTACTTATAAATGCAATGAGTGGCTAGATGAACAGGATAGAGCAC 55975 Query 18665 GTTATGAGGACTTGTATCGTACAAACCCTAGACGTGCAAGAATTGTTTGTGATGGTGAAT 18724 |||||||| || ||| || ||||| |||||||||||||| ||||||||||| |||| Sbjct 55974 GTTATGAGAGTTTATATACTAAGAACCCAAGACGTGCAAGAATCGTTTGTGATGGCGAAT 55915 Query 18725 GGGGCGTAGCTGAAGGACTTGTATTTGATAACTTCGAAGTGAAAGAGTTTGA-CTGGTTG 18783 ||||||| ||||| || ||||||| ||| |||||| |||| ||| ||||| | | || Sbjct 55914 GGGGCGTTGCTGATGGTCTTGTATATGAAAACTTCCAAGTACGAGACTTTGATATTGATG 55855 Query 18784 AAAGTATTCAAACGGACACA---AGAAAAAGCTCACGGAAGCGATTTCGGATTTACTCAC 18840 | | || |||| | | | | ||| ||| || ||| || || | ||| || Sbjct 55854 AGA-TAAGACAACGAAAAGATGTACAAAGTGCTTTTGGTCTCGACTTTGGTTATACGAAC 55796 Query 18841 GATCCGACTACATTGATTAGTACCGTTGTAGACATGAAGAA--CAAAGAATTATGGATAT 18898 ||||| ||| |||||| | || | | || || | ||||| || | ||||| ||| Sbjct 55795 GATCCAACTGCATTGACTTGTTCTTTAGTTGATTTAAAGAATGAAACTATTTATG--TAT 55738 Query 18899 ACGACGAACACTATGAAAAAGGTATG 18924 ||| |||||| | ||||||||||| Sbjct 55737 TCGATGAACACAGTCAAAAAGGTATG 55712 Score = 358 bits (396), Expect = 2e-94 Identities = 641/926 (69%), Gaps = 19/926 (2%) Strand=Plus/Minus Query 18013 TTATAAACGATGTGCCAGCCGATGACTGA-----TAAAACGTTA--AGCATTACAAAAAC 18065 |||| ||||||||||| ||||| ||| || ||||||| || | || | || Sbjct 99353 TTATTGACGATGTGCCACAGGATGA-TGACGATGTATAACGTTATTAGTACTAAAGAACT 99295 Query 18066 AATCGGTGGTGGTTACAACAAATTCTGGCATAACAAAAACTTTTACAGAGTGGTAAAAGG 18125 || || ||||| ||||| ||||||||| ||| ||||| || ||||| ||||| Sbjct 99294 TATTGGCGGTGGATACAATCGTTTCTGGCATTGCAAGAACTTCTATAGAGTTTGCAAAGG 99235 Query 18126 CTCTAGGGGTAGTAAAAAGAGTAAGACAACTGCACTAAACTTTATATACAGATTAATGGA 18185 ||| | ||| ||| ||| ||| ||||||| | ||||||| | | || | ||| | Sbjct 99234 TTCTCGTGGTTCTAAGAAGTCTAAAACAACTGTATTAAACTTCGTTAAACGAATCATGCA 99175 Query 18186 ATATGAATGGGCTAACTTGCTTGTAGTTAGACGTTTTAGTAATACAAACAAACAATCAAC 18245 || |||||||| | || || ||| | | | |||||| || ||||| Sbjct 99174 GTACCCCTGGGCTAATCTCCTAGTGGTTCGTAGATACTCCAATACATTAAAGCAATCTTG 99115 Query 18246 ATATACAGACTTAAAGTGGGCTACAAACCAATTAGGTGTGGCTCACTTATTTAAGTTTAA 18305 || || || ||||| ||||| | ||| ||| || || || ||||||||| || Sbjct 99114 TTACACTGATTTAAAATGGGCCATTAACAGATTGGGAGTAAAAGACCAATTTAAGTTCAA 99055 Query 18306 CGATAGTTTACCAGAGATTACTTACAAACCGACTGGCCAAAAAATATTATTCAGAGGGCT 18365 || | |||||||| || || ||||| ||||| || || ||||| || |||| | Sbjct 99054 TGAGTCAATGCCAGAGATAACATATAAACCTACTGGACAGAAGATATTGTTTCGAGGATT 98995 Query 18366 TGATGATCCATTAAAGATTACATCAATCACAGTTGACAAAGGAATATTAAGTTGGTGTTG 18425 ||||||||||| || || ||||| || || ||||| || | || | ||| ||| Sbjct 98994 AGATGATCCATTGAAAATAACATCTATTACTGTTGATGTGGGTAATTTGTGCTGGGCTTG 98935 Query 18426 GATAGAAGAAGCATATCAAGTTGAA-ACCTACGATAAATTCGCAACACTTGTTGAGTCTA 18484 | | || ||||| || || | ||| ||| || |||| || | |||| ||||||| |||| Sbjct 98934 GTTTGAGGAAGCTTACGAAATAGAAGACCAAC-ATAAGTTTGAAACAGTTGTTGAATCTA 98876 Query 18485 TTCGTGGTAGTGTTGACAGTCCTAACTTTTTTAAACAAATTACAGTTACATTCAACCCAT 18544 |||||||| | |||| |||| |||| ||||||||||| |||||||| || ||||| | Sbjct 98875 TTCGTGGTTCTTTTGATGCTCCTGACTTCTTTAAACAAATCACAGTTACTTTTAACCCTT 98816 Query 18545 GGAGTGAACGTCATTGGCTTAAACCTACATTCTTTGATGAAGATACACGATTAAACAATA 18604 |||||||| |||||||||||| || ||||||||||||| ||||| | | | | Sbjct 98815 GGAGTGAAAACCATTGGCTTAAATCTTATTTCTTTGATGAAGCTACACAAGCTTATGACA 98756 Query 18605 CATTTTCATACACGACAACATTTCGAGTGAATGAATGGCTTGATGATGTCGATATTGCAC 18664 | || | | || || || | | | ||||| ||||| ||||| |||| |||| Sbjct 98755 CGTTCGCCTTTACTACTACTTATAAATGCAATGAGTGGCTAGATGAACAGGATAGAGCAC 98696 Query 18665 GTTATGAGGACTTGTATCGTACAAACCCTAGACGTGCAAGAATTGTTTGTGATGGTGAAT 18724 |||||||| || ||| || ||||| |||||||||||||| ||||||||||| |||| Sbjct 98695 GTTATGAGAGTTTATATACTAAGAACCCAAGACGTGCAAGAATCGTTTGTGATGGCGAAT 98636 Query 18725 GGGGCGTAGCTGAAGGACTTGTATTTGATAACTTCGAAGTGAAAGAGTTTGA-CTGGTTG 18783 ||||||| ||||| || ||||||| ||| |||||| |||| ||| ||||| | | || Sbjct 98635 GGGGCGTTGCTGATGGTCTTGTATATGAAAACTTCCAAGTACGAGACTTTGATATTGATG 98576 Query 18784 AAAGTATTCAAACGGACACA---AGAAAAAGCTCACGGAAGCGATTTCGGATTTACTCAC 18840 | | || |||| | | | | ||| ||| || ||| || || | ||| || Sbjct 98575 AGA-TAAGACAACGAAAAGATGTACAAAGTGCTTTTGGTCTCGACTTTGGTTATACGAAC 98517 Query 18841 GATCCGACTACATTGATTAGTACCGTTGTAGACATGAAGAA--CAAAGAATTATGGATAT 18898 ||||| ||| |||||| | || | | || || | ||||| || | ||||| ||| Sbjct 98516 GATCCAACTGCATTGACTTGTTCTTTAGTTGATTTAAAGAATGAAACTATTTATG--TAT 98459 Query 18899 ACGACGAACACTATGAAAAAGGTATG 18924 ||| |||||| | ||||||||||| Sbjct 98458 TCGATGAACACAGTCAAAAAGGTATG 98433 Score = 358 bits (396), Expect = 2e-94 Identities = 641/926 (69%), Gaps = 19/926 (2%) Strand=Plus/Minus Query 18013 TTATAAACGATGTGCCAGCCGATGACTGA-----TAAAACGTTA--AGCATTACAAAAAC 18065 |||| ||||||||||| ||||| ||| || ||||||| || | || | || Sbjct 142285 TTATTGACGATGTGCCACAGGATGA-TGACGATGTATAACGTTATTAGTACTAAAGAACT 142227 Query 18066 AATCGGTGGTGGTTACAACAAATTCTGGCATAACAAAAACTTTTACAGAGTGGTAAAAGG 18125 || || ||||| ||||| ||||||||| ||| ||||| || ||||| ||||| Sbjct 142226 TATTGGCGGTGGATACAATCGTTTCTGGCATTGCAAGAACTTCTATAGAGTTTGCAAAGG 142167 Query 18126 CTCTAGGGGTAGTAAAAAGAGTAAGACAACTGCACTAAACTTTATATACAGATTAATGGA 18185 ||| | ||| ||| ||| ||| ||||||| | ||||||| | | || | ||| | Sbjct 142166 TTCTCGTGGTTCTAAGAAGTCTAAAACAACTGTATTAAACTTCGTTAAACGAATCATGCA 142107 Query 18186 ATATGAATGGGCTAACTTGCTTGTAGTTAGACGTTTTAGTAATACAAACAAACAATCAAC 18245 || |||||||| | || || ||| | | | |||||| || ||||| Sbjct 142106 GTACCCCTGGGCTAATCTCCTAGTGGTTCGTAGATACTCCAATACATTAAAGCAATCTTG 142047 Query 18246 ATATACAGACTTAAAGTGGGCTACAAACCAATTAGGTGTGGCTCACTTATTTAAGTTTAA 18305 || || || ||||| ||||| | ||| ||| || || || ||||||||| || Sbjct 142046 TTACACTGATTTAAAATGGGCCATTAACAGATTGGGAGTAAAAGACCAATTTAAGTTCAA 141987 Query 18306 CGATAGTTTACCAGAGATTACTTACAAACCGACTGGCCAAAAAATATTATTCAGAGGGCT 18365 || | |||||||| || || ||||| ||||| || || ||||| || |||| | Sbjct 141986 TGAGTCAATGCCAGAGATAACATATAAACCTACTGGACAGAAGATATTGTTTCGAGGATT 141927 Query 18366 TGATGATCCATTAAAGATTACATCAATCACAGTTGACAAAGGAATATTAAGTTGGTGTTG 18425 ||||||||||| || || ||||| || || ||||| || | || | ||| ||| Sbjct 141926 AGATGATCCATTGAAAATAACATCTATTACTGTTGATGTGGGTAATTTGTGCTGGGCTTG 141867 Query 18426 GATAGAAGAAGCATATCAAGTTGAA-ACCTACGATAAATTCGCAACACTTGTTGAGTCTA 18484 | | || ||||| || || | ||| ||| || |||| || | |||| ||||||| |||| Sbjct 141866 GTTTGAGGAAGCTTACGAAATAGAAGACCAAC-ATAAGTTTGAAACAGTTGTTGAATCTA 141808 Query 18485 TTCGTGGTAGTGTTGACAGTCCTAACTTTTTTAAACAAATTACAGTTACATTCAACCCAT 18544 |||||||| | |||| |||| |||| ||||||||||| |||||||| || ||||| | Sbjct 141807 TTCGTGGTTCTTTTGATGCTCCTGACTTCTTTAAACAAATCACAGTTACTTTTAACCCTT 141748 Query 18545 GGAGTGAACGTCATTGGCTTAAACCTACATTCTTTGATGAAGATACACGATTAAACAATA 18604 |||||||| |||||||||||| || ||||||||||||| ||||| | | | | Sbjct 141747 GGAGTGAAAACCATTGGCTTAAATCTTATTTCTTTGATGAAGCTACACAAGCTTATGACA 141688 Query 18605 CATTTTCATACACGACAACATTTCGAGTGAATGAATGGCTTGATGATGTCGATATTGCAC 18664 | || | | || || || | | | ||||| ||||| ||||| |||| |||| Sbjct 141687 CGTTCGCCTTTACTACTACTTATAAATGCAATGAGTGGCTAGATGAACAGGATAGAGCAC 141628 Query 18665 GTTATGAGGACTTGTATCGTACAAACCCTAGACGTGCAAGAATTGTTTGTGATGGTGAAT 18724 |||||||| || ||| || ||||| |||||||||||||| ||||||||||| |||| Sbjct 141627 GTTATGAGAGTTTATATACTAAGAACCCAAGACGTGCAAGAATCGTTTGTGATGGCGAAT 141568 Query 18725 GGGGCGTAGCTGAAGGACTTGTATTTGATAACTTCGAAGTGAAAGAGTTTGA-CTGGTTG 18783 ||||||| ||||| || ||||||| ||| |||||| |||| ||| ||||| | | || Sbjct 141567 GGGGCGTTGCTGATGGTCTTGTATATGAAAACTTCCAAGTACGAGACTTTGATATTGATG 141508 Query 18784 AAAGTATTCAAACGGACACA---AGAAAAAGCTCACGGAAGCGATTTCGGATTTACTCAC 18840 | | || |||| | | | | ||| ||| || ||| || || | ||| || Sbjct 141507 AGA-TAAGACAACGAAAAGATGTACAAAGTGCTTTTGGTCTCGACTTTGGTTATACGAAC 141449 Query 18841 GATCCGACTACATTGATTAGTACCGTTGTAGACATGAAGAA--CAAAGAATTATGGATAT 18898 ||||| ||| |||||| | || | | || || | ||||| || | ||||| ||| Sbjct 141448 GATCCAACTGCATTGACTTGTTCTTTAGTTGATTTAAAGAATGAAACTATTTATG--TAT 141391 Query 18899 ACGACGAACACTATGAAAAAGGTATG 18924 ||| |||||| | ||||||||||| Sbjct 141390 TCGATGAACACAGTCAAAAAGGTATG 141365 Score = 358 bits (396), Expect = 2e-94 Identities = 641/926 (69%), Gaps = 19/926 (2%) Strand=Plus/Minus Query 18013 TTATAAACGATGTGCCAGCCGATGACTGA-----TAAAACGTTA--AGCATTACAAAAAC 18065 |||| ||||||||||| ||||| ||| || ||||||| || | || | || Sbjct 185163 TTATTGACGATGTGCCACAGGATGA-TGACGATGTATAACGTTATTAGTACTAAAGAACT 185105 Query 18066 AATCGGTGGTGGTTACAACAAATTCTGGCATAACAAAAACTTTTACAGAGTGGTAAAAGG 18125 || || ||||| ||||| ||||||||| ||| ||||| || ||||| ||||| Sbjct 185104 TATTGGCGGTGGATACAATCGTTTCTGGCATTGCAAGAACTTCTATAGAGTTTGCAAAGG 185045 Query 18126 CTCTAGGGGTAGTAAAAAGAGTAAGACAACTGCACTAAACTTTATATACAGATTAATGGA 18185 ||| | ||| ||| ||| ||| ||||||| | ||||||| | | || | ||| | Sbjct 185044 TTCTCGTGGTTCTAAGAAGTCTAAAACAACTGTATTAAACTTCGTTAAACGAATCATGCA 184985 Query 18186 ATATGAATGGGCTAACTTGCTTGTAGTTAGACGTTTTAGTAATACAAACAAACAATCAAC 18245 || |||||||| | || || ||| | | | |||||| || ||||| Sbjct 184984 GTACCCCTGGGCTAATCTCCTAGTGGTTCGTAGATACTCCAATACATTAAAGCAATCTTG 184925 Query 18246 ATATACAGACTTAAAGTGGGCTACAAACCAATTAGGTGTGGCTCACTTATTTAAGTTTAA 18305 || || || ||||| ||||| | ||| ||| || || || ||||||||| || Sbjct 184924 TTACACTGATTTAAAATGGGCCATTAACAGATTGGGAGTAAAAGACCAATTTAAGTTCAA 184865 Query 18306 CGATAGTTTACCAGAGATTACTTACAAACCGACTGGCCAAAAAATATTATTCAGAGGGCT 18365 || | |||||||| || || ||||| ||||| || || ||||| || |||| | Sbjct 184864 TGAGTCAATGCCAGAGATAACATATAAACCTACTGGACAGAAGATATTGTTTCGAGGATT 184805 Query 18366 TGATGATCCATTAAAGATTACATCAATCACAGTTGACAAAGGAATATTAAGTTGGTGTTG 18425 ||||||||||| || || ||||| || || ||||| || | || | ||| ||| Sbjct 184804 AGATGATCCATTGAAAATAACATCTATTACTGTTGATGTGGGTAATTTGTGCTGGGCTTG 184745 Query 18426 GATAGAAGAAGCATATCAAGTTGAA-ACCTACGATAAATTCGCAACACTTGTTGAGTCTA 18484 | | || ||||| || || | ||| ||| || |||| || | |||| ||||||| |||| Sbjct 184744 GTTTGAGGAAGCTTACGAAATAGAAGACCAAC-ATAAGTTTGAAACAGTTGTTGAATCTA 184686 Query 18485 TTCGTGGTAGTGTTGACAGTCCTAACTTTTTTAAACAAATTACAGTTACATTCAACCCAT 18544 |||||||| | |||| |||| |||| ||||||||||| |||||||| || ||||| | Sbjct 184685 TTCGTGGTTCTTTTGATGCTCCTGACTTCTTTAAACAAATCACAGTTACTTTTAACCCTT 184626 Query 18545 GGAGTGAACGTCATTGGCTTAAACCTACATTCTTTGATGAAGATACACGATTAAACAATA 18604 |||||||| |||||||||||| || ||||||||||||| ||||| | | | | Sbjct 184625 GGAGTGAAAACCATTGGCTTAAATCTTATTTCTTTGATGAAGCTACACAAGCTTATGACA 184566 Query 18605 CATTTTCATACACGACAACATTTCGAGTGAATGAATGGCTTGATGATGTCGATATTGCAC 18664 | || | | || || || | | | ||||| ||||| ||||| |||| |||| Sbjct 184565 CGTTCGCCTTTACTACTACTTATAAATGCAATGAGTGGCTAGATGAACAGGATAGAGCAC 184506 Query 18665 GTTATGAGGACTTGTATCGTACAAACCCTAGACGTGCAAGAATTGTTTGTGATGGTGAAT 18724 |||||||| || ||| || ||||| |||||||||||||| ||||||||||| |||| Sbjct 184505 GTTATGAGAGTTTATATACTAAGAACCCAAGACGTGCAAGAATCGTTTGTGATGGCGAAT 184446 Query 18725 GGGGCGTAGCTGAAGGACTTGTATTTGATAACTTCGAAGTGAAAGAGTTTGA-CTGGTTG 18783 ||||||| ||||| || ||||||| ||| |||||| |||| ||| ||||| | | || Sbjct 184445 GGGGCGTTGCTGATGGTCTTGTATATGAAAACTTCCAAGTACGAGACTTTGATATTGATG 184386 Query 18784 AAAGTATTCAAACGGACACA---AGAAAAAGCTCACGGAAGCGATTTCGGATTTACTCAC 18840 | | || |||| | | | | ||| ||| || ||| || || | ||| || Sbjct 184385 AGA-TAAGACAACGAAAAGATGTACAAAGTGCTTTTGGTCTCGACTTTGGTTATACGAAC 184327 Query 18841 GATCCGACTACATTGATTAGTACCGTTGTAGACATGAAGAA--CAAAGAATTATGGATAT 18898 ||||| ||| |||||| | || | | || || | ||||| || | ||||| ||| Sbjct 184326 GATCCAACTGCATTGACTTGTTCTTTAGTTGATTTAAAGAATGAAACTATTTATG--TAT 184269 Query 18899 ACGACGAACACTATGAAAAAGGTATG 18924 ||| |||||| | ||||||||||| Sbjct 184268 TCGATGAACACAGTCAAAAAGGTATG 184243 Score = 358 bits (396), Expect = 2e-94 Identities = 641/926 (69%), Gaps = 19/926 (2%) Strand=Plus/Minus Query 18013 TTATAAACGATGTGCCAGCCGATGACTGA-----TAAAACGTTA--AGCATTACAAAAAC 18065 |||| ||||||||||| ||||| ||| || ||||||| || | || | || Sbjct 399513 TTATTGACGATGTGCCACAGGATGA-TGACGATGTATAACGTTATTAGTACTAAAGAACT 399455 Query 18066 AATCGGTGGTGGTTACAACAAATTCTGGCATAACAAAAACTTTTACAGAGTGGTAAAAGG 18125 || || ||||| ||||| ||||||||| ||| ||||| || ||||| ||||| Sbjct 399454 TATTGGCGGTGGATACAATCGTTTCTGGCATTGCAAGAACTTCTATAGAGTTTGCAAAGG 399395 Query 18126 CTCTAGGGGTAGTAAAAAGAGTAAGACAACTGCACTAAACTTTATATACAGATTAATGGA 18185 ||| | ||| ||| ||| ||| ||||||| | ||||||| | | || | ||| | Sbjct 399394 TTCTCGTGGTTCTAAGAAGTCTAAAACAACTGTATTAAACTTCGTTAAACGAATCATGCA 399335 Query 18186 ATATGAATGGGCTAACTTGCTTGTAGTTAGACGTTTTAGTAATACAAACAAACAATCAAC 18245 || |||||||| | || || ||| | | | |||||| || ||||| Sbjct 399334 GTACCCCTGGGCTAATCTCCTAGTGGTTCGTAGATACTCCAATACATTAAAGCAATCTTG 399275 Query 18246 ATATACAGACTTAAAGTGGGCTACAAACCAATTAGGTGTGGCTCACTTATTTAAGTTTAA 18305 || || || ||||| ||||| | ||| ||| || || || ||||||||| || Sbjct 399274 TTACACTGATTTAAAATGGGCCATTAACAGATTGGGAGTAAAAGACCAATTTAAGTTCAA 399215 Query 18306 CGATAGTTTACCAGAGATTACTTACAAACCGACTGGCCAAAAAATATTATTCAGAGGGCT 18365 || | |||||||| || || ||||| ||||| || || ||||| || |||| | Sbjct 399214 TGAGTCAATGCCAGAGATAACATATAAACCTACTGGACAGAAGATATTGTTTCGAGGATT 399155 Query 18366 TGATGATCCATTAAAGATTACATCAATCACAGTTGACAAAGGAATATTAAGTTGGTGTTG 18425 ||||||||||| || || ||||| || || ||||| || | || | ||| ||| Sbjct 399154 AGATGATCCATTGAAAATAACATCTATTACTGTTGATGTGGGTAATTTGTGCTGGGCTTG 399095 Query 18426 GATAGAAGAAGCATATCAAGTTGAA-ACCTACGATAAATTCGCAACACTTGTTGAGTCTA 18484 | | || ||||| || || | ||| ||| || |||| || | |||| ||||||| |||| Sbjct 399094 GTTTGAGGAAGCTTACGAAATAGAAGACCAAC-ATAAGTTTGAAACAGTTGTTGAATCTA 399036 Query 18485 TTCGTGGTAGTGTTGACAGTCCTAACTTTTTTAAACAAATTACAGTTACATTCAACCCAT 18544 |||||||| | |||| |||| |||| ||||||||||| |||||||| || ||||| | Sbjct 399035 TTCGTGGTTCTTTTGATGCTCCTGACTTCTTTAAACAAATCACAGTTACTTTTAACCCTT 398976 Query 18545 GGAGTGAACGTCATTGGCTTAAACCTACATTCTTTGATGAAGATACACGATTAAACAATA 18604 |||||||| |||||||||||| || ||||||||||||| ||||| | | | | Sbjct 398975 GGAGTGAAAACCATTGGCTTAAATCTTATTTCTTTGATGAAGCTACACAAGCTTATGACA 398916 Query 18605 CATTTTCATACACGACAACATTTCGAGTGAATGAATGGCTTGATGATGTCGATATTGCAC 18664 | || | | || || || | | | ||||| ||||| ||||| |||| |||| Sbjct 398915 CGTTCGCCTTTACTACTACTTATAAATGCAATGAGTGGCTAGATGAACAGGATAGAGCAC 398856 Query 18665 GTTATGAGGACTTGTATCGTACAAACCCTAGACGTGCAAGAATTGTTTGTGATGGTGAAT 18724 |||||||| || ||| || ||||| |||||||||||||| ||||||||||| |||| Sbjct 398855 GTTATGAGAGTTTATATACTAAGAACCCAAGACGTGCAAGAATCGTTTGTGATGGCGAAT 398796 Query 18725 GGGGCGTAGCTGAAGGACTTGTATTTGATAACTTCGAAGTGAAAGAGTTTGA-CTGGTTG 18783 ||||||| ||||| || ||||||| ||| |||||| |||| ||| ||||| | | || Sbjct 398795 GGGGCGTTGCTGATGGTCTTGTATATGAAAACTTCCAAGTACGAGACTTTGATATTGATG 398736 Query 18784 AAAGTATTCAAACGGACACA---AGAAAAAGCTCACGGAAGCGATTTCGGATTTACTCAC 18840 | | || |||| | | | | ||| ||| || ||| || || | ||| || Sbjct 398735 AGA-TAAGACAACGAAAAGATGTACAAAGTGCTTTTGGTCTCGACTTTGGTTATACGAAC 398677 Query 18841 GATCCGACTACATTGATTAGTACCGTTGTAGACATGAAGAA--CAAAGAATTATGGATAT 18898 ||||| ||| |||||| | || | | || || | ||||| || | ||||| ||| Sbjct 398676 GATCCAACTGCATTGACTTGTTCTTTAGTTGATTTAAAGAATGAAACTATTTATG--TAT 398619 Query 18899 ACGACGAACACTATGAAAAAGGTATG 18924 ||| |||||| | ||||||||||| Sbjct 398618 TCGATGAACACAGTCAAAAAGGTATG 398593 Score = 197 bits (218), Expect = 4e-46 Identities = 297/417 (71%), Gaps = 9/417 (2%) Strand=Plus/Minus Query 18514 TTTAAACAAATTACAGTTACATTCAACCCATGGAGTGAACGTCATTGGCTTAAACCTACA 18573 ||||||||||| |||||||| || ||||| ||||||||| |||||||||||| || Sbjct 356064 TTTAAACAAATCACAGTTACTTTTAACCCTTGGAGTGAAAACCATTGGCTTAAATCTTAT 356005 Query 18574 TTCTTTGATGAAGATACACGATTAAACAATACATTTTCATACACGACAACATTTCGAGTG 18633 ||||||||||||| ||||| | | | || || | | || || || | | | Sbjct 356004 TTCTTTGATGAAGCTACACAAGCTTATGACACGTTCGCCTTTACTACTACTTATAAATGC 355945 Query 18634 AATGAATGGCTTGATGATGTCGATATTGCACGTTATGAGGACTTGTATCGTACAAACCCT 18693 ||||| ||||| ||||| |||| |||||||||||| || ||| || ||||| Sbjct 355944 AATGAGTGGCTAGATGAACAGGATAGAGCACGTTATGAGAGTTTATATACTAAGAACCCA 355885 Query 18694 AGACGTGCAAGAATTGTTTGTGATGGTGAATGGGGCGTAGCTGAAGGACTTGTATTTGAT 18753 |||||||||||||| ||||||||||| ||||||||||| ||||| || ||||||| ||| Sbjct 355884 AGACGTGCAAGAATCGTTTGTGATGGCGAATGGGGCGTTGCTGATGGTCTTGTATATGAA 355825 Query 18754 AACTTCGAAGTGAAAGAGTTTGA-CTGGTTGAAAGTATTCAAACGGACACA---AGAAAA 18809 |||||| |||| ||| ||||| | | ||| | || |||| | | | | ||| Sbjct 355824 AACTTCCAAGTACGAGACTTTGATATTGATGAGA-TAAGACAACGAAAAGATGTACAAAG 355766 Query 18810 AGCTCACGGAAGCGATTTCGGATTTACTCACGATCCGACTACATTGATTAGTACCGTTGT 18869 ||| || ||| || || | ||| ||||||| ||| |||||| | || | | || Sbjct 355765 TGCTTTTGGTCTCGACTTTGGTTATACGAACGATCCAACTGCATTGACTTGTTCTTTAGT 355706 Query 18870 AGACATGAAGAA--CAAAGAATTATGGATATACGACGAACACTATGAAAAAGGTATG 18924 || | ||||| || | ||||| ||| ||| |||||| | ||||||||||| Sbjct 355705 TGATTTAAAGAATGAAACTATTTATG--TATTCGATGAACACAGTCAAAAAGGTATG 355651 Score = 194 bits (214), Expect = 5e-45 Identities = 365/532 (69%), Gaps = 10/532 (2%) Strand=Plus/Minus Query 18013 TTATAAACGATGTGCCAGCCGATGACTGA-----TAAAACGTTA--AGCATTACAAAAAC 18065 |||| ||||||||||| ||||| ||| || ||||||| || | || | || Sbjct 356644 TTATTGACGATGTGCCACAGGATGA-TGACGATGTATAACGTTATTAGTACTAAAGAACT 356586 Query 18066 AATCGGTGGTGGTTACAACAAATTCTGGCATAACAAAAACTTTTACAGAGTGGTAAAAGG 18125 || || ||||| ||||| ||||||||| ||| ||||| || ||||| ||||| Sbjct 356585 TATTGGCGGTGGATACAATCGTTTCTGGCATTGCAAGAACTTCTATAGAGTTTGCAAAGG 356526 Query 18126 CTCTAGGGGTAGTAAAAAGAGTAAGACAACTGCACTAAACTTTATATACAGATTAATGGA 18185 ||| | ||| ||| ||| ||| ||||||| | ||||||| | | || | ||| | Sbjct 356525 TTCTCGTGGTTCTAAGAAGTCTAAAACAACTGTATTAAACTTCGTTAAACGAATCATGCA 356466 Query 18186 ATATGAATGGGCTAACTTGCTTGTAGTTAGACGTTTTAGTAATACAAACAAACAATCAAC 18245 || |||||||| | || || ||| | | | |||||| || ||||| Sbjct 356465 GTACCCCTGGGCTAATCTCCTAGTGGTTCGTAGATACTCCAATACATTAAAGCAATCTTG 356406 Query 18246 ATATACAGACTTAAAGTGGGCTACAAACCAATTAGGTGTGGCTCACTTATTTAAGTTTAA 18305 || || || ||||| ||||| | ||| ||| || || || ||||||||| || Sbjct 356405 TTACACTGATTTAAAATGGGCCATTAACAGATTGGGAGTAAAAGACCAATTTAAGTTCAA 356346 Query 18306 CGATAGTTTACCAGAGATTACTTACAAACCGACTGGCCAAAAAATATTATTCAGAGGGCT 18365 || | |||||||| || || ||||| ||||| || || ||||| || |||| | Sbjct 356345 TGAGTCAATGCCAGAGATAACATATAAACCTACTGGACAGAAGATATTGTTTCGAGGATT 356286 Query 18366 TGATGATCCATTAAAGATTACATCAATCACAGTTGACAAAGGAATATTAAGTTGGTGTTG 18425 ||||||||||| || || ||||| || || ||||| || | || | ||| ||| Sbjct 356285 AGATGATCCATTGAAAATAACATCTATTACTGTTGATGTGGGTAATTTGTGCTGGGCTTG 356226 Query 18426 GATAGAAGAAGCATATCAAGTTGAA-ACCTACGATAAATTCGCAACACTTGTTGAGTCTA 18484 | | || ||||| || || | ||| ||| || |||| || | |||| ||||||| |||| Sbjct 356225 GTTTGAGGAAGCTTACGAAATAGAAGACCAAC-ATAAGTTTGAAACAGTTGTTGAATCTA 356167 Query 18485 TTCGTGGTAGTGTTGACAGTCCTAACTTTTTTAAACAAATTACAGTTACATT 18536 |||||||| | |||| |||| |||| ||||||||||| |||||||| || Sbjct 356166 TTCGTGGTTCTTTTGATGCTCCTGACTTCTTTAAACAAATCACAGTTACTTT 356115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142960863981312