Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq87 134 2e-26 seq15 132 6e-26 seq8 129 7e-25 seq7 116 4e-21 seq6 113 5e-20 seq13 109 7e-19 seq2 104 3e-17 seq1 100 3e-16 seq5 95.1 1e-14 seq11 87.8 2e-12 seq33 84.2 3e-11 >seq87 Length=644924 Score = 134 bits (148), Expect = 2e-26 Identities = 298/445 (67%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 175237 GTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGC 175296 ||||| ||||| ||| | || ||||| | || ||||| |||||| ||| Sbjct 378694 GTGGAGTTTCTGAAGAAGCCTGAGAGGTTCACTGCGGTCGGTGCTCGGATCCCGAAAGGT 378753 Query 175297 GCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGT 175356 | || |||| ||| || ||||| || || || ||| | || ||||| || ||| Sbjct 378754 GTTCTCCTCGTTGGTCCTCCCGGTACTGGGAAAACACTCTTGGCAAAGGCCATTGCTGGT 378813 Query 175357 GAATCAAATGTCCCATTCAT--CCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTG 175414 ||| | || || ||| | ||| ||| | | | ||||| ||||||||||| | Sbjct 378814 GAAGCTGGCGTACCGTTCTTTTCCAT--CTCGGGTTCTGAGTTTGTTGAGATGTTTGTCG 378871 Query 175415 GTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTA 175474 |||| ||||| ||||| || ||||| || ||| ||| || || || |||| Sbjct 378872 GTGTTGGTGCTTCGAGGGTCCGTGATCTTTTCAAAAAGGCCAAGGAGAACGCTCCTTGTA 378931 Query 175475 TTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAG 175534 ||||||| | |||||||||||||| || || | |||| | | ||||| | || Sbjct 378932 TTGTCTTTGTGGATGAGATTGATGCTGTTGGTAGGCAAAGAGGAACTGGTATTGGTGGAG 378991 Query 175535 CAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACA 175594 ||||| || |||||||| || |||| || || || || ||||||||||| ||||| Sbjct 378992 GTAATGATGAAAGAGAACAGACGCTTAACCAGCTTCTGACGGAGATGGATGGTTTTGAAG 379051 Query 175595 ATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCC 175654 | | ||||| || | ||| |||| || || || | | ||||| ||||| |||| Sbjct 379052 GTAACACTGGTGTTATCGTTGTTGCTGCAACCAACAGAGCTGATATTCTTGACTCCGCCT 379111 Query 175655 TCCTTCGCCCGGGTCGTTTTGATCG 175679 | ||| | || || |||||||| || Sbjct 379112 TGCTTAGACCCGGCCGTTTTGACCG 379136 >seq15 Length=39600445 Score = 132 bits (146), Expect = 6e-26 Identities = 300/448 (67%), Gaps = 10/448 (2%) Strand=Plus/Minus Query 175237 GTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGC 175296 ||||| ||||| ||| | || ||||| | || ||||| |||||| ||| Sbjct 9763265 GTGGAGTTTCTGAAGAAGCCTGAGAGGTTCACTGCGGTCGGTGCTCGGATCCCGAAAGGT 9763206 Query 175297 GCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGT 175356 | ||||||| ||| || || || || || || ||| | || ||||| || ||| Sbjct 9763205 GTTCTTCTCGTTGGTCCTCCTGGAACTGGGAAAACACTCTTGGCAAAGGCCATTGCTGGT 9763146 Query 175357 GAATCAAATGTCCCATTCAT--CCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTG 175414 ||| | ||| || ||| | ||| ||||| | | ||||| ||||||||||||| Sbjct 9763145 GAAGCTGGTGTACCGTTCTTTTCCAT--CTCTGGTTCTGAGTTTGTTGAGATGTTTGTTG 9763088 Query 175415 GTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTA 175474 |||| ||||| ||||| || ||||| || ||| ||| || || || |||| Sbjct 9763087 GTGTTGGTGCTTCGAGGGTCCGTGATCTTTTCAAAAAGGCCAAGGAGAACGCTCCGTGTA 9763028 Query 175475 TTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGT---GGTATGC 175531 ||||||| | |||||||||||||| || || | |||| | | ||||| ||| Sbjct 9763027 TTGTCTTTGTGGATGAGATTGATGCTGTTGGTAGGCAAAGAGGGACTGGTATCGGT---G 9762971 Query 175532 CAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTG 175591 || ||||| || |||||||| || |||| || || || || ||||||||||| |||| Sbjct 9762970 GAGGTAATGATGAAAGAGAACAGACGCTTAACCAGCTTCTGACGGAGATGGATGGTTTTG 9762911 Query 175592 ACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACG 175651 | | | ||||| || | || |||| || || || | | ||||| ||||| || Sbjct 9762910 AAGGTAACACTGGTGTTATCGTGGTTGCTGCAACCAACAGAGCTGATATTCTTGACTCCG 9762851 Query 175652 CCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 || | | | || || |||||||| || Sbjct 9762850 CCTTGTTGAGACCAGGACGTTTTGACCG 9762823 >seq8 Length=24646021 Score = 129 bits (142), Expect = 7e-25 Identities = 297/446 (67%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 175237 GTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGC 175296 ||||| ||||||||| | || ||||| | || ||||| |||||| ||| Sbjct 23191843 GTGGAGTTTCTCAAGAAGCCTGAGAGGTTCACTGCGGTCGGTGCTCGGATCCCTAAAGGT 23191784 Query 175297 GCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGT 175356 | ||| |||| ||| || || || || || |||||| | ||| |||||| || ||| Sbjct 23191783 GTCCTCCTCGTTGGTCCTCCTGGGACTGGTAAAACCCTCTTGGCCAAAGCCATTGCTGGT 23191724 Query 175357 GAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGT 175416 || | ||| || ||| || ||| | | | || || ||||||||||| ||| Sbjct 23191723 GAGGCCGGTGTGCCTTTCTTCTCCATCTCGGGGTCTGAGTTCGTTGAGATGTTTGTCGGT 23191664 Query 175417 GTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATT 175476 || || ||| ||||| || ||||| || | | || || ||| || |||||| Sbjct 23191663 GTTGGGGCCTCGAGGGTGCGTGATCTTTTCAAGAAGGCTAAGGAGAATGCTCCGTGTATT 23191604 Query 175477 GTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGCCA 175533 ||||| | || ||||||||||| || || | ||| | | |||| |||| | Sbjct 23191603 GTCTTTGTGGACGAGATTGATGCTGTTGGTAGGCAGAGAGGAACTGGGATTGGTGG---A 23191547 Query 175534 GCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGAC 175593 | ||||| || ||||| || || | ||||| || | || ||||||||||| ||||| Sbjct 23191546 GGGAATGATGAAAGAGAGCAGACCTTGAATCAGCTTTTGACTGAGATGGATGGGTTTGAG 23191487 Query 175594 AATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCC 175653 | | ||||| || | ||| |||| || |||||| | | ||||| ||||| |||| Sbjct 23191486 GGTAACACTGGTGTTATTGTTGTTGCTGCTACTAATAGAGCTGATATTCTTGACTCCGCC 23191427 Query 175654 CTCCTTCGCCCGGGTCGTTTTGATCG 175679 | || | || || |||||||| || Sbjct 23191426 TTGCTGAGACCAGGGCGTTTTGACCG 23191401 >seq7 Length=43258566 Score = 116 bits (128), Expect = 4e-21 Identities = 217/317 (68%), Gaps = 4/317 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || |||||||| ||| ||| || |||| |||| || || || || ||||| || Sbjct 36921694 GGCGCCAAGATTCCCAAAGGGTGTCTCCTCGTGGGTCCCCCCGGGACTGGGAAGACTCTG 36921635 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 | || |||| | || || ||| | || || ||| || ||| | || | | Sbjct 36921634 TTAGCTAGAGCTGTGGCTGGAGAAGCCGGAGTGCCGTTCTTCTCCTGCGCGGCGTCTGAG 36921575 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||||||| | || ||||||||||||||| |||||| | ||| | || || | || Sbjct 36921574 TTTGTGGAGCTTTTCGTTGGTGTGGGTGCCTCTAGGGTTAGGGATTTGTTCGAGAAGGCT 36921515 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGC 175515 | || || |||||||| |||||||| ||||||||||| ||||| | ||| | Sbjct 36921514 AAGGCCAAGGCGCCTTGTATTGTTTTCATTGACGAGATTGATGCTGTGGGGAGGCAGAGA 36921455 Query 175516 AGCGCTGG--TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCA 175573 | ||||| ||| | | || ||||| ||||| || || || |||||||| || | | Sbjct 36921454 GGAGCTGGGATGGGAGG--AGGGAATGATGAGAGGGAGCAGACGATTAATCAGCTCTTGA 36921397 Query 175574 CCGAGATGGATGGCTTT 175590 | ||||||||||| ||| Sbjct 36921396 CTGAGATGGATGGGTTT 36921380 Score = 105 bits (116), Expect = 8e-18 Identities = 153/213 (72%), Gaps = 11/213 (5%) Strand=Plus/Minus Query 177757 GTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCGGAGCAGGCA 177816 ||||| |||| ||||||| | ||||| ||||||||||| ||||| | | |||||| Sbjct 15652321 GTGACGAAGTTCTCACCTCGGCGGGGTGACTCGTGGTTGAATAGGATCCTGTTGCAGGCG 15652262 Query 177817 TACATACCATAGGATTCTCGGTAATTTTTGAC---GAGCCAGTGAGCGGCCAATTTGGAG 177873 |||| || || | |||||||||||| ||| | ||||||||||| |||||||| Sbjct 15652261 TACAGGCCGTATGCTTCTCGGTAATT---GACTGTGTACCAGTGAGCGGTGCATTTGGAG 15652205 Query 177874 ACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCTCGGACT 177933 | ||||| |||| ||||| || |||||| ||||| ||| |||| ||| | Sbjct 15652204 GCATCATAGGGAGATCTTGGGTGAAAAGGTGTCGTCTCAGATTGCGGAG----GAGGAGT 15652149 Query 177934 TTA-CCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 | | || |||||||| || | | |||||||| Sbjct 15652148 TGACCCGAACATCTCTGAGGAACAAGCTTGGTA 15652116 Score = 82.4 bits (90), Expect = 9e-11 Identities = 155/225 (69%), Gaps = 11/225 (5%) Strand=Plus/Plus Query 177745 GTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATT 177804 || || ||| | || || |||| | ||||| | ||||| ||||||||||| ||||| Sbjct 16841619 GTTATTTTCCTAGTCACGAAGTTCTCGCCTCGGCGGGGTGACTCGTGGTTGAATAGGATC 16841678 Query 177805 CCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGAC---GAGCCAGTGAGCG 177861 ||| |||||| |||| || || | ||||||||| ||||| | ||| ||||| Sbjct 16841679 CCGTTGCAGGCGTACAGGCCGTATGCTTCTCGGTA---GTTGACTGTGTACCAATGAGCA 16841735 Query 177862 GCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGA 177921 || |||||||| | | || |||| |||| || || ||| ||||| ||| ||| Sbjct 16841736 GCGCATTTGGAGGCAGCGTAAGGAGATCTCGGGTGAAACGGCGTCGTCTCAGATTGCGGA 16841795 Query 177922 GTTTCTCGGACTTTA-CCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 | ||| || | || ||||||||||| | | ||| ||||| Sbjct 16841796 G----GAGGAGTTGACCCGAACATCTCCGAGGATCCGGCCTGGTA 16841836 >seq6 Length=47127078 Score = 113 bits (124), Expect = 5e-20 Identities = 143/196 (73%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 65022 GAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 ||||||||| ||||||| ||||| ||| | ||| | |||| | ||||||||| | Sbjct 44872207 GAAGAAGGCCCAATGGGCCATGAAGTGGATCGACGGA---TCTCAGACTTTCGCCGAGAG 44872263 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 | | |||||||| || ||||| || |||||||||||||| |||||| | || | Sbjct 44872264 GATCGTGGCGTTTGCTTGCGTGGAAGGGATCTTCTTCTCCGGTAGCTTCTGCTCGATCTT 44872323 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| |||||||||| || |||||||| || || |||||| || || | || || || Sbjct 44872324 CTGGCTGAAGAAGCGAGGGCTCATGCCGGGTTTAACCTTCTCCAACGAGTTGATCTCTCG 44872383 Query 65202 AGATGAGGGTCTCCAC 65217 ||| || || || ||| Sbjct 44872384 AGACGAAGGCCTTCAC 44872399 Score = 98.7 bits (108), Expect = 1e-15 Identities = 198/289 (69%), Gaps = 10/289 (3%) Strand=Plus/Plus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 |||| ||||| | ||| | || | |||| |||| || ||||| || ||||| |||| Sbjct 41592330 TCAAGAAACTCCTCCACGGTATGCGACTCCTCCGTGGCCACAACGTAATCATCCGCCTTC 41592389 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| |||||||| ||||||||||| ||| || ||||||||||| Sbjct 41592390 TCTTGCTGCAGCATCAGCCACATCGCTTCAACATAATCCCCCGCGAACCCCCAGTCTCTC 41592449 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 | || | ||| || ||||| || || || || ||| | | || ||| | | Sbjct 41592450 GACGCCTGGAGATTCCCGAG---AAAGAGCT-TC-CTCTGCAAACCCACCTTGATCCTCC 41592504 Query 177739 CCA----TC-AGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGT 177793 ||| || || |||||| | || || |||| | || || | ||| || ||||||| Sbjct 41592505 CCAAGGCTCTCGTTATCTTCCTCGTCACGAAGTTCTCTCCGCGGCGCGGGGACTCGTGGT 41592564 Query 177794 TGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATT 177842 |||| | ||| ||| |||||| | | ||| || | || ||||| || Sbjct 41592565 TGAACAAGATCCCGTTACAGGCAAAAAGACCGTAAGCCTCACGGTAGTT 41592613 >seq13 Length=54295181 Score = 109 bits (120), Expect = 7e-19 Identities = 142/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 65022 GAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 ||||||||| ||||||| ||||| ||| | ||| | |||| | ||||||||| | Sbjct 40048349 GAAGAAGGCCCAATGGGCCATGAAGTGGATCGACGGA---TCTCAGACTTTCGCCGAGAG 40048293 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 | | ||||| || || ||||| || |||||||||||||| |||||| | || | Sbjct 40048292 GATCGTGGCGTTCGCTTGCGTGGAAGGGATCTTCTTCTCCGGTAGCTTCTGCTCGATCTT 40048233 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || || |||||| || || || || || || Sbjct 40048232 CTGGCTCAAGAAGCGAGGGCTCATGCCGGGGCTTACCTTCTCCAACGAGCTGATCTCGCG 40048173 Query 65202 AGATGAGGGTCTCCAC 65217 ||| || || || ||| Sbjct 40048172 AGACGAAGGCCTTCAC 40048157 >seq2 Length=31488241 Score = 104 bits (114), Expect = 3e-17 Identities = 273/410 (67%), Gaps = 19/410 (5%) Strand=Plus/Minus Query 177564 AAACTGCCTC-ACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTT 177622 ||||| |||| || | ||| | |||| | || || || ||||| ||||| | | || | Sbjct 31426767 AAACT-CCTCGACGGTGTGCGACTCCTCAGTAGCCACCACATAGTCATCTGGTTTCTCCT 31426709 Query 177623 GTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCAG 177682 | || ||||| |||||||| || || || |||||| || ||||||||||||| | Sbjct 31426708 GCTGCAGCATCAGCCACATTGCCTCCACGTAGTCCCCTGCGAACCCCCAGTCTCTGGAGG 31426649 Query 177683 CGTTGAGGTTACCGAGTTCAAGGAACTCTCTCT-CACCTTTCACAATTTGTTTGACGCCA 177741 | | | ||| ||||| | || || ||| || | | | ||| | | ||| Sbjct 31426648 CCTGTATGTTCCCGAGG---AAGAGCTTCGTCTGCAGC---CCGACCTTGATCCTCCCCA 31426595 Query 177742 TCA-----GTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGA 177796 || |||||| || || |||| | ||||| | ||||| |||||||||| Sbjct 31426594 AGGCCCGTGTTATCTTCCGAGTCACGAAGTTCTCGCCTCGGCGGGGTGACTCGTGGTTGA 31426535 Query 177797 AGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGT 177856 | ||||| ||| |||||| |||| || || | ||||| |||||| | | ||||| Sbjct 31426534 ACAGGATCCCGTTGCAGGCGTACAGGCCGTATGCTTCTCTGTAATTGACGGTGTACCAGT 31426475 Query 177857 GAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTT 177916 |||| || | ||||||| | ||||| |||| |||| || || ||| ||||| | Sbjct 31426474 GAGCCGCGACTTTGGAGGCAGCATAGGGAGATCTCGGGTGAAACGGCGTCGTCTCAGACT 31426415 Query 177917 GTGGAGTTTCTCGGACTTTA-CCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 | |||| ||| || | || ||||||||||| | | ||| ||||| Sbjct 31426414 GCGGAG----GAGGAGTTGACCCGAACATCTCCGAGGATCCGGCCTGGTA 31426369 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 65022 GAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 ||||||||| ||||||| |||| ||| | || | |||| | ||||||||| | Sbjct 7377181 GAAGAAGGCCCAATGGGCTTTGAAGTGGATCGATGGA---TCTCAGACTTTCGCCGAGAG 7377125 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 | | || || ||||| ||||| || |||||||||||||| |||||| | || | Sbjct 7377124 GATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTTCTGCTCCATCTT 7377065 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || || |||||| || || || || || || Sbjct 7377064 CTGGCTCAAGAAGCGAGGGCTCATGCCGGGGCTCACCTTCTCCAACGAGCTGATCTCGCG 7377005 Query 65202 AGATGAGGGTCTCCAC 65217 || || || || ||| Sbjct 7377004 GGACGAAGGCCTTCAC 7376989 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 65022 GAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 ||||||||| ||||||| |||| ||| | || | |||| | ||||||||| | Sbjct 27066255 GAAGAAGGCCCAATGGGCTTTGAAGTGGATCGATGGA---TCTCAGACTTTCGCCGAGAG 27066311 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 | | || || ||||| ||||| || |||||||||||||| |||||| | || | Sbjct 27066312 GATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTTCTGCTCCATCTT 27066371 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || || |||||| || || || || || || Sbjct 27066372 CTGGCTCAAGAAGCGAGGGCTCATGCCGGGGCTCACCTTCTCCAACGAGCTGATCTCGCG 27066431 Query 65202 AGATGAGGGTCTCCAC 65217 || || || || ||| Sbjct 27066432 GGACGAAGGCCTTCAC 27066447 >seq1 Length=46747018 Score = 100 bits (110), Expect = 3e-16 Identities = 280/424 (66%), Gaps = 17/424 (4%) Strand=Plus/Plus Query 177549 GAAGCACATTTCAACAAACTGCCTC-ACAGAGTGTGTCTCCCCCGTCGCGACAACATATT 177607 |||| ||| || | ||||| |||| || | ||| | |||| | || || || ||||| | Sbjct 11384655 GAAGGACACGTCCAGAAACT-CCTCGACGGTGTGCGACTCCTCAGTAGCCACCACATAGT 11384713 Query 177608 CATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGAC 177667 |||| | | || || || ||||| |||||||| || || || |||||| || | Sbjct 11384714 CATCTGGTTTCTCCTGCTGCAGCATCAGCCACATTGCCTCCACGTAGTCCCCTGCGAACC 11384773 Query 177668 CCCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAA 177727 |||||||||| | || | | ||| || || | || || ||| | || | Sbjct 11384774 CCCAGTCTCTTGAGGCCTGTATGTTCCCCAGG---AAGAGCTTCGTCTG--CAGTCCGAC 11384828 Query 177728 TTTGTTTGACGCCATCA-----GTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGG 177782 ||| | | ||| || |||||| || || |||| | |||| | || Sbjct 11384829 CTTGATCCTCCCCAAGGCCCGTGTTATCTTCCGAGTCACGAAGTTCTCGCCTCTGCGGGG 11384888 Query 177783 TGATTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATT 177842 ||| ||||||||||| ||||| ||| |||||| |||| || || | ||||| |||||| Sbjct 11384889 TGACTCGTGGTTGAACAGGATCCCGTTGCAGGCGTACAGGCCGTATGCTTCTCTGTAATT 11384948 Query 177843 TTTGACGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGG 177902 | | ||||||||| || | ||||||| | ||||| |||| |||| || || Sbjct 11384949 GACGGTGTACCAGTGAGCTGCGACTTTGGAGGCAGCATAGGGAGATCTCGGGTGAAACGG 11385008 Query 177903 TGTCTCCTCAGTTTGTGGAGTTTCTCGGACTTTA-CCAAACATCTCCGAAGTTGAGGCTT 177961 ||| ||||| ||| |||| ||| || | || ||||||||||| | | ||| | Sbjct 11385009 CGTCGTCTCAGATTGGGGAG----GAGGAGTTGACCCGAACATCTCCGAGGATCCGGCCT 11385064 Query 177962 GGTA 177965 |||| Sbjct 11385065 GGTA 11385068 >seq5 Length=35747119 Score = 95.1 bits (104), Expect = 1e-14 Identities = 244/371 (66%), Gaps = 12/371 (3%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || ||||| || ||||| || || || ||| || || |||||| | || || ||| Sbjct 10002695 CCTGGTACTGGGAAGACGCTTCTGGCGAAAGCTATAGCTGGTGAAGCTGGCGTGCCGTTC 10002754 Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434 || ||| | | | ||||| ||||||||||| ||||| ||||| ||||| Sbjct 10002755 TTCTCTATCTCCGGGTCCGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCTTCCAGGGTC 10002814 Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATT 175494 || ||||| || | | || || || || || || ||||| ||||||||||| Sbjct 10002815 CGTGATCTTTTCAAGAAGGCTAAGGAGAACGCTCCTTGCATCGTCTTTGTTGATGAGATT 10002874 Query 175495 GATGCGGTGGGCAAGCAACG-----CAGCGCT-GGTGGTATGCCAGCAAATGACGAGAGA 175548 ||||| || || | ||| | ||| | | ||||| || ||||| |||||| Sbjct 10002875 GATGCTGTTGGGAGGCAGAGAGGGACAGGGATCGGTGG------AGGTAATGATGAGAGA 10002928 Query 175549 GAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATT 175608 ||||| || | || || || | || ||||||||||| ||||| | | ||||| || Sbjct 10002929 GAACAGACTTTGAACCAGCTGTTAACTGAGATGGATGGGTTTGAAGGTAACACTGGTATC 10002988 Query 175609 GTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGT 175668 | ||| |||| || || ||| | | || || ||||| ||| | | | ||||| Sbjct 10002989 ATCGTTGTTGCTGCGACCAATAGAGCAGACATTCTTGACTCCGCTTTGTTGAGGCCGGGA 10003048 Query 175669 CGTTTTGATCG 175679 || ||||| || Sbjct 10003049 CGGTTTGACCG 10003059 >seq11 Length=45114658 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/189 (70%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 65022 GAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 ||||||||| ||||||| |||| ||| | ||| | |||| | ||||||||| | Sbjct 34047342 GAAGAAGGCCCAATGGGCCATGACGTGGATCGACGGA---TCTCAGACTTTCGCCGAGAG 34047398 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 | | || || || || || || || |||||||||||||| |||||| | || | Sbjct 34047399 GATCGTCGCCTTCGCTTGCGTCGAAGGGATCTTCTTCTCCGGTAGCTTCTGCTCGATCTT 34047458 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || || |||||| || || | || || || Sbjct 34047459 CTGGCTTAAGAAGCGAGGGCTCATGCCTGGGTTAACCTTCTCCAACGAGTTGATCTCTCG 34047518 Query 65202 AGATGAGGG 65210 ||| || || Sbjct 34047519 AGACGAAGG 34047527 >seq33 Length=1153486 Score = 84.2 bits (92), Expect = 3e-11 Identities = 195/289 (67%), Gaps = 10/289 (3%) Strand=Plus/Minus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 |||| ||||| | ||| | || | |||| ||||||| ||||| || ||||| |||| Sbjct 791455 TCAAGAAACTCCTCCACCGTATGCGACTCCTCCGTCGCCACAACGTAATCATCCGCCTTC 791396 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| |||||||| || || || || ||| || ||||||||||| Sbjct 791395 TCTTGCTGCAGCATCAGCCACATCGCCTCCACGTAATCCCCCGCGAACCCCCAGTCTCTC 791336 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 | || | |||||| || || || || || || ||| | | || ||| | | Sbjct 791335 GACGCCTGGAGGTTCCCTAG---AAAGAGCT-TC-CTCTGCAAACCCACCTTGATCCTCC 791281 Query 177739 CCA----TC-AGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGT 177793 ||| || || |||||| | || || |||| | || || | ||| || ||||||| Sbjct 791280 CCAAGGCTCTCGTTATCTTCCTCGTCACGAAGTTCTCTCCCCGGCGCGGGGACTCGTGGT 791221 Query 177794 TGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATT 177842 |||| | ||| ||| || ||| | | ||| || | || ||||| || Sbjct 791220 TGAACAAGATCCCGTTACACGCAAAAAGACCGTAAGCCTCACGGTAGTT 791172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596559339002880