Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_021307.1 Length=49894 Score E Sequences producing significant alignments: (Bits) Value seq8 1032 0.0 seq18 598 1e-166 seq1 223 1e-53 seq9 179 1e-40 >seq8 Length=24646021 Score = 1032 bits (1144), Expect = 0.0 Identities = 1597/2244 (71%), Gaps = 117/2244 (5%) Strand=Plus/Minus Query 8274 GTCCGCAATGTCGAGATGGCAGGACGGAAGCAGATCCTTCGGGCGGTCGAGAACGACCCC 8333 || ||| | || ||||||||||| || |||||| | | || ||| |||||||||| Sbjct 19508440 GTGCGCGAAGTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACCCA 19508381 Query 8334 GAGCCCCAGAAGGTCACGGGGTGGGCCCGAGTGGCGACTGGTCGAGAGACCTGTGCCTGG 8393 | || |||| || | ||| ||||| | || || || || || || || || |||||| Sbjct 19508380 GCTCCTCAGATCGTGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGG 19508321 Query 8394 TGCCTGATGCTGATCTCGCGAGGCCCCGTATACCTCGATGCG-AGAACAGCCGGCTTCGA 8452 || ||||||||||| || || ||||||| ||||| ||| | | | | | |||| | Sbjct 19508320 TGTCTGATGCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTC-A 19508262 Query 8453 CGTTGACAACGAGCAGGCGCTCGAAATCCT---CGCTGCTGGTGAGGATGTC----AGT- 8504 | | |||| |||| | | |||| || || ||||| ||| | ||| Sbjct 19508261 CCTCGACACCGAGACCGTGGTCGACCTCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTT 19508202 Query 8505 -------GAGTACATGCG---------GGAGTGGCATACGGGCTGCGACTGCAAAGTGGT 8548 ||| || || ||||||||| | || ||||||||| ||||| Sbjct 19508201 CCGCGAAGAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGT 19508142 Query 8549 GCCGGTCTACGACAAGAAGAACTGGCCAGGGTACGCCGAGTACAAGCGTGCCGAGAAGTT 8608 ||| |||| |||| | |||||||||| || | |||| | | || || | || | Sbjct 19508141 GCCTGTCTTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCT 19508082 Query 8609 GTGGATCGACGCCGGTAGAGAGGCAAGCCGCCTCATCGAGTCGGGCGAAGCTCGTACTCG 8668 ||||||||||| || | ||| || |||| ||||| | || ||| | || || | Sbjct 19508081 CTGGATCGACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAA 19508022 Query 8669 AAACATGAACAAGGAGACGCAGAACGCGCTCCGTCGTCGGCTCGAAAGAGGCGACATCAC 8728 |||| ||||||||||||| ||||| |||||||| || | | | ||||| || | Sbjct 19508021 AAACGAGAACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCGAGTTCGC 19507962 Query 8729 CATGACCGAGTTCGCGGTAGCCGCGTAACTCATCACCGAGCAGCCCCCAGGTGGGGC--T 8786 ||| |||| | ||| | || |||||| || | |||| | |||||||||| | Sbjct 19507961 AATGTCCGACTACGCACTCGCTGCGTAA-TC--CCCCGAAC----CCCAGGTGGGTTCAT 19507909 Query 8787 CAAACATGCCCAGGAGGCGAATCAGTATGGCTGACAACGACACCCAGACCCCCGACACCA 8846 ||| ||||||||||||||||| ||| | |||| || || ||| | ||| Sbjct 19507908 CAACCATGCCCAGGAGGCGAAAACACATGTCCGACACCGTAACT---ACCGAAGGCACT- 19507853 Query 8847 CCGGCACGCCGGAAGGCACCCCGGAGGGCGAGACGCAGGCCCCGGAGGCCCCAGTCG--A 8904 ||||| || || ||||||| || | | || ||| | | | || | || | Sbjct 19507852 CCGGCCGGC--GACCCGACCCCGGTGGTC-ACTGACAAGCCGCTG-GAACCGACTCCGAA 19507797 Query 8905 GACCTTCAGCCGGGAGTACGTCGAGGAACTCCGTCGTGAGAACGCCAAGGCACGCACCGC 8964 ||||| | | || |||||| |||| || || | ||| ||| || || || Sbjct 19507796 GACCTACGACGAGGCATACGTCAAGGAGCTTCGCCAGGAGGCCGCTGCTGCTCGGGTTGC 19507737 Query 8965 CAAGAAGACCGCCGTCGATGAGGC---CAAGGC--CGAAGTGACGCGGATCTACGAGGCG 9019 ||||||| ||| ||||| | || |||||| |||| ||||| | || | || Sbjct 19507736 CAAGAAGGACGCAGTCGAAGCCGCAGTCAAGGCGGCGAAC-GACGCTCAC--ACC-GCCG 19507681 Query 9020 AAGCTGGCCGAGAAGGACACGGCCTACACCGAACTGGAGAACCAGCTCGGACAGGCGTGG 9079 || || || | ||||| |||||| ||||||||| |||| |||||||| ||| Sbjct 19507680 AA-CTCGCTGCTCGCGACACTCGAATCACCGAGCTGGAGAACGAGCTGGGACAGGCTTGG 19507622 Query 9080 ATCGAGCTGGAGAAGGTCTACACGGCCATCGACGCAAAGGTCCCGTCCGACAAGGTCCGC 9139 ||| |||| ||||| | | || | | | ||||||||| || ||||||||| | | Sbjct 19507621 ATCCGGCTGCAGAAGCTGGAGACCTCGCTTGCCGCAAAGGTTCCCAGCGACAAGGTGCTC 19507562 Query 9140 GCTTTCGCGGCGATCCTGCAGGGGTCCGATCCTGACTCGATCAAGGAGTCAGCGAAGTCG 9199 || |||| | ||| ||||||| || ||||||||||| ||||| |||||| | Sbjct 19507561 GCGTTCGTTGACATCTTGCAGGGCGAGGACGCTGACTCGATCGCCGAGTCCGCGAAGAAG 19507502 Query 9200 GCCACGGAACTGTTCGGGGGCTTCAACACGAAGCAGCCC-CCGGT--CGACCCCACCCAG 9256 | |||||| |||| || ||| ||| ||||| | ||||| ||||||||||||| Sbjct 19507501 AACCTCGAACTGATCGGCGGTTTCGACAAGAAGCCGGTTTCCGGTTTCGACCCCACCCAG 19507442 Query 9257 GGTTCCGGTGGT-GGCAAGCACACGCCGCTCAACGGAGACCCGATCCTCGAAGCCCTCAA 9315 || | ||||||| |||| | || |||||||||||| |||||||||||| | ||| | || Sbjct 19507441 GGCTTCGGTGGTCGGCAGGAACT-GCCGCTCAACGGTGACCCGATCCTCAACGCCATGAA 19507383 Query 9316 GCGGGCTGTCGG--------------GGCCTAATCCCCAA--CTAGGCAAGGAAGATA-C 9358 | | | | |||| | || | |||| |||| |||||| || | Sbjct 19507382 GGGCGTTCTCGGCATCAAGTGATGTCGAGCTGAAACCCATTCCTAGACAAGGAGATTAGC 19507323 Query 9359 AAATGGCAGCAGGAACTGCTTTCCCGGTCAACCACACGCAGATCGCGCAGACCGGTGACT 9418 | ||||| ||||| ||||||||| | || | ||| | |||||||| |||||||| || Sbjct 19507322 AGATGGCCGCAGGCACTGCTTTCGCAGTTGATCACGCTCAGATCGCCCAGACCGGCGATA 19507263 Query 9419 CGATGTTCCAGGGTTACCTGGAGCCCGAGCAGGCACAGGACTACTTCGCGGAAGCGGAGA 9478 | |||||| |||| |||||||||||||||||||| |||| |||||||| || || |||| Sbjct 19507262 CCATGTTCAAGGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGA 19507203 Query 9479 AGACCTCCATCGTTCAGCGCGTGGCGCGGAAGATCCCCATGGGTTCGACCGGCGTGAAGA 9538 ||||||| ||||| |||| | || | |||| | || |||||| | || ||| ||||| Sbjct 19507202 AGACCTCGATCGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGA 19507143 Query 9539 TCCCGCACTGGACCGGCGACGTGAGCGCCGCGTGGATCGGTGAAGGCGACATGAAGCCGA 9598 ||||||||||| |||||||||||| ||| |||||||||||| || ||||||||||| | Sbjct 19507142 TCCCGCACTGGGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCA 19507083 Query 9599 TCACCAAGGGCGACATGAGCGTC-CAGCAGGTCGAGCCGCACAAGATCGCGACGATCTTC 9657 ||||||||||| |||||| | || ||| ||| ||| ||||||||||||||||||||| Sbjct 19507082 TCACCAAGGGCAACATGA-CTTCGCAGACCATCGCGCCCCACAAGATCGCGACGATCTTC 19507024 Query 9658 GTGGCCTCGGCCGAAACCGTCCGTGCGAACCCCGGCAACTACCTGGGCACCATGCGGACC 9717 ||||| || || || ||||||||||| ||||||| |||||||||||| |||||||| ||| Sbjct 19507023 GTGGCGTCTGCGGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACC 19506964 Query 9718 AAGGTCGCCACGGCCATCGCGCTGGCGTTCGACGAGGCGGCGCTGCACGGCACCGACTCG 9777 ||||| || || ||| ||||| |||||||||||| |||||| |||||||||||||| Sbjct 19506963 AAGGTGGCGACCGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGACAGC 19506904 Query 9778 CCGTTCGACAAGAACCTGGATGAGACGACCAAGTC--GGTCGA--CCTCACCCCGGCCAC 9833 |||||| | || | | | |||| |||||| | |||| || || |||| Sbjct 19506903 CCGTTCCCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGAC----ACCAC 19506848 Query 9834 CGG---CACGACC---TACGACGCCATCGGCGTGAACGCCCTGAGCTTGCTGGTCAACGC 9887 ||| ||||||| |||||| | | |||||||| ||||||| ||||||| |||| Sbjct 19506847 CGGTGCCACGACCGTGTACGACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGTGAACGA 19506788 Query 9888 CGGCAAGAAGTGGGGTGCCACTCTGCTGGACGACGTGGCCGAGCCCATCCTCAACGGTGC 9947 ||||||||||||| ||| || ||||||||| | ||||||| ||||| ||||| || Sbjct 19506787 CGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAACGGCGC 19506728 Query 9948 CAAGGACGCGAACGGCCGCCCGCTGTTCGTGGAGAGCACCTACGAGGCGGTCACCACGCC 10007 |||||| |||||| |||||||||||| | ||| ||||||| | || | | | || Sbjct 19506727 GAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAGGCCGCGAGCCC 19506668 Query 10008 GTACCGCGAGGGCCGCATCCTGGGCCGTCCGACCATCCTGAGCGACCACGTCGCTTCGGG 10067 || ||| |||||| ||| | | ||||||||||||||| ||||||||||||| ||| Sbjct 19506667 GTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGTGGAGGG 19506608 Query 10068 CACCACGGTCGGCTACCTGGGCGACTTCTCGCAGATCGTCTGGGGCCAGGTCGGCGGTCT 10127 |||||||||||||| | |||| |||||||| ||| || ||||||||||| |||||||||| Sbjct 19506607 CACCACGGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGCCAGATCGGCGGTCT 19506548 Query 10128 GTCCTTCGACGTTTCGGATCAGGCGACCCTCAACCTGGGTA-CGCCGCAGGCTCCGAACT 10186 |||||||||||| |||||||||||||||| |||||||| | || || || ||||||| Sbjct 19506547 GTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTCG-AGAGCCCGAACT 19506489 Query 10187 TCGTGTCGCTGTGGCAGCACAACCTCGTCGCTGTCCGTGTGGAGGCCGAGTACGGCTTGC 10246 |||| |||||||||||||||||||||||||| |||||||| ||||| ||||||| || | Sbjct 19506488 TCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGCTGAGTACGCGTTCC 19506429 Query 10247 TCATCAACGACGTGGAAGCGTTCGTCAAGCTCACCAAC-------GCGGC--------CT 10291 | |||||||| || ||||||||| || |||||| ||||| || Sbjct 19506428 ACTGCAACGACGCCGAGGCGTTCGTCGCTCTGACCAACGTGGTCAGCGGCGGCGAGGGCT 19506369 Query 10292 GAGCCTGACTTGACATCGCAC--GGTGGGGGTCCTT--CGGGGCCCCCACCACGCG-GTG 10346 |||||| |||||||||| ||| || ||||| | || || |||||| || | | || Sbjct 19506368 GAGCCTAACTTGACATC-CACCGGGAGGGGGCCGTTCACGCGGCCCCTTCCTGGGGTGTC 19506310 Query 10347 AGACAGGAGCCGAATGAAGATTCGACACAAGACCAACGGTGGCGAGGCAGATGTCACCGA 10406 || |||| | ||| ||| | | || ||||||||| || || ||| |||| Sbjct 19506309 TGAGAGGA-CTTCATGCGGATCCAATCCACCGTCAACGGTGGGTTCGCGGAGGTCTCCGA 19506251 Query 10407 GGACTACGCCCAGTCCCTGATCGC 10430 || ||||||||| ||||||||| Sbjct 19506250 CGAGTACGCCCAGCGCCTGATCGC 19506227 Score = 123 bits (136), Expect = 8e-24 Identities = 247/359 (69%), Gaps = 23/359 (6%) Strand=Plus/Minus Query 10725 TCGAGGCCGACATGGTCTTGCGGCTGCTCCGGAACCCTGAGGGCTACACCCAGGAGACGG 10784 ||||||||||| ||| |||| ||| | || ||||| ||||||||| | |||||| | Sbjct 19505963 TCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAACCCGGAGGGCTACCTCTCGGAGACCG 19505904 Query 10785 ACGGCAACTACACGTACATGCTCCACCAACAGCTCGCCTCCGGG-AAGCTGGAGGTGCTC 10843 |||| ||||| ||| |||||| | || | ||| ||| ||||| | | || Sbjct 19505903 ACGGGGCGTACACCTACCAGCTCCAGGCTGATCT-GTCTCAGGGCAAGCTCGTCATCCTT 19505845 Query 10844 CCCGAAGAGTGGGAGGCGTTGGG---CATCCGGCGTACCGGGACGTTCGTTCTGGTACCG 10900 |||||||||| | | ||||| || ||| | | | | || | | || ||| Sbjct 19505844 GGCGAAGAGTGGACGACCTTGGGAGTCAACCGACTCTCGCGCATGTCCACCATCGTCCCG 19505785 Query 10901 ACCTTCCAGATGCCGACATGAGCGCCAGCGACCGGCAGCCGCCGGCTCCG------TACC 10954 | | || |||||||||||||||||||||||| |||| | |||||| |||| Sbjct 19505784 AACATCGTGATGCCGACATGAGCGCCAGCGACGTTCAGCGG---GCTCCGATCAAGTACC 19505728 Query 10955 CGCCAGACG--CTCCTG-CGGTTCGTCCGGAGAACGTGGACGTGGAGAAGTGCGACCACG 11011 |||| | |||||| |||| || || | || |||| | || ||||||||||| Sbjct 19505727 CGCCGGGGTTTCTCCTGGCGGTCACACCTGACCAAGTCGACGCCGCGATGTGCGACCACG 19505668 Query 11012 A----GTTCGG--GGTCTGCTACTGCGTCCACGACTGGCGCATCCACTGGGGCAACGTC 11064 | | || ||||||||||||||||||||||||||||||| | | ||||||||| Sbjct 19505667 AAGCGGATCCTCCGGTCTGCTACTGCGTCCACGACTGGCGCATCGAGTTCGGCAACGTC 19505609 >seq18 Length=36757632 Score = 598 bits (662), Expect = 1e-166 Identities = 655/876 (75%), Gaps = 55/876 (6%) Strand=Plus/Plus Query 32829 CACCGAGAACCGGATGCGCCGGTAGAAGTACCGGGCGAAGATCGGGTGGATACCCTCACT 32888 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 22717068 CACCGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACT 22717127 Query 32889 CACACCAGGCATTTTCGCGATGGTGCCCGTGGGGGCTACCGTGCGCTTCTTCACCGGCAC 32948 || |||||||| ||||||||||| || || ||||| |||||||||||||| |||||||| Sbjct 22717128 GACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCAC 22717187 Query 32949 CGGGATACGCAGCTCGTGGCTGAACCGCTCGGCAGCGATGTCGACCTCCTTGGCCAGCTC 33008 |||||| |||| ||| ||||||||| |||||| || |||||||||| ||||| ||| Sbjct 22717188 CGGGATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTC 22717247 Query 33009 CCTGAGCATCTTCCGGAAGTGCTTGTCCGAAGGCGCTTGTGAGAACCGCTTGTTGGTCAT 33068 || | | ||| ||||||| || || || || ||| | |||| Sbjct 22717248 CCGCAAGAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAG 22717307 Query 33069 GGCCAGGAAGGACGCCACACCCAGATGCCCGACGCCGATGCGTCGGTTGCGGTCCAGAAC 33128 ||||| |||| ||||| || || ||||| || |||||||| |||||||| |||||||| Sbjct 22717308 GGCCAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAAC 22717367 Query 33129 CTCTCGGCTCTTGGGGTCCGCGACGGGTGAGAACGTCGCCCGGATCAGGAACCGGGTCAT 33188 |||||||||||| || || ||||| | ||||||||||||||||||||||||||| ||||| Sbjct 22717368 CTCTCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCAT 22717427 Query 33189 CAGGCGATGGGCCCGGATCAGGTCGATGTAATCGACCCGCCCGTTGTCCTTGACGAAGGC 33248 ||| || ||||| ||||||||||||||||| ||| | |||| ||| ||||||| || Sbjct 22717428 CAGACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGGCGTCGGTGACGAACGC 22717487 Query 33249 TGCCAGGTTGATGTGCCCCAGGTTGCAGGGCTCCCACGCTTCGAGCGTGATCTCCCCGCA 33308 || |||||||||||||| ||||||||||||||||||| || ||||||||||||||||| Sbjct 22717488 CGCGAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCCGCA 22717547 Query 33309 CGGGTTGGTGCAGATGACCTGGTTGGGCTCCCCGACGTTGGACAGCGAGCTGTCCCAGAA 33368 |||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||| | Sbjct 22717548 CGGGTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCACAT 22717607 Query 33369 CCCAGGCTCACCGTTGGTGACCATGCCGTGGGTGATGCCGTCCAGCACGTCGCGAGC--- 33425 ||| ||||| |||||| || || | || || | | |||||| | | || Sbjct 22717608 CCCCGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGCCTT 22717667 Query 33426 AGTGGCCTGCTCGACAACGTCATCCCAGTCCTCCGGGAGCTTGGCGACGAGCCGCCAGAA 33485 |||| || || || | ||| | || ||||| | || | |||||| Sbjct 22717668 CGTGG--AGCGCG----GGTTGAGCGGGTCGACAGGAGCCTTGG---CCAGGCTCCAGAA 22717718 Query 33486 CTCCGCATCGACCTCGACCGAGATGTTGGTCGTCCAG---------------TGCTTG-- 33528 | | | || ||||||||||||||||| || |||||| |||||| Sbjct 22717719 CGCATCGTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGAT 22717778 Query 33529 ------------------------CCGGTGTCCTGCTTGATCCGCATGAAC-TCACGGAT 33563 ||| ||||||||||||| ||||| || | | Sbjct 22717779 GTTGGTGAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTC-GCC 22717837 Query 33564 CTGCGGGTCGTTCCAGTGCATCATGGCCATGCGTGCCGACCGGCGTACACCGCCGGCTAC 33623 |||| ||| |||||||||||| |||||||| ||||||||||| ||||| ||||| || Sbjct 22717838 CTGCCAGTCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCAC 22717897 Query 33624 CACGCACTGAGCGATGGCGTGGTCGATCTCCATCGC 33659 ||| ||||| |||||||||||||||||||||||||| Sbjct 22717898 CACACACTGCGCGATGGCGTGGTCGATCTCCATCGC 22717933 Score = 179 bits (198), Expect = 1e-40 Identities = 269/385 (70%), Gaps = 18/385 (5%) Strand=Plus/Plus Query 41426 CCATCCAGTAGTCCCCGGTCTTCGGGGGCTCGATGCCGTACATCAGCGACACCGCGATGG 41485 |||| ||||||| ||||||||||| | ||||| ||||| ||| || ||||||| | Sbjct 22718198 CCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCG 22718257 Query 41486 CGTAGACAGCGAGCTGGAAGTCGTCGCCAGGCTGGTTGCCTGTCTTGTGGTCTCGGACCC 41545 |||| || |||||||||||||||| || || ||||| || ||||||| ||| ||||| | Sbjct 22718258 CGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTC 22718317 Query 41546 TCAGCTCCCAAACCCCTGGTGCTACTTCGACTTCCACGATGGCGTCGATGTAGCCCCGGA 41605 ||||||| | ||||| | |||| |||||||||||| || || | Sbjct 22718318 GAAGCTCCC---------------CGTCGACCACGACGACGGCGTCGATGTATCCGCGAA 22718362 Query 41606 CGGGGACTCCGTCGAGGTCGATGTCGAACGCCAGCTCGATACCTGGTGTGCCGTCAGGCG 41665 | ||| |||||||| ||||| ||||| ||||||||| |||| || ||||| || | Sbjct 22718363 CCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGG 22718422 Query 41666 CGATCCAGATGACCTCGTCGGGGTGCGACTCGGCCCAGTTGATGTACTTCTCACACTGGT 41725 | |||||| ||| | | | | | ||| ||| || | ||||||| ||| | Sbjct 22718423 TCACCCAGATCTCCTGGCCCG---GAGTCTCCCGCCACGCGAAGAACTTCTCGACCTGCT 22718479 Query 41726 CCTGGCCGATGTCCTCGCGGCGGGTGATGTCTCGCTTGCCCCGGTACGGGCCCGAGGCGA 41785 || |||||| | | ||||| ||||||||||| || |||||| || || Sbjct 22718480 CCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACG 22718539 Query 41786 ACCACCAGTCGAAGTTCGGTGTGTC 41810 |||||| ||||||||||| || || Sbjct 22718540 TCCACCACTCGAAGTTCGGGGTCTC 22718564 >seq1 Length=46747018 Score = 223 bits (246), Expect = 1e-53 Identities = 160/184 (87%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 1685 CATGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGAGTCCT 1744 || ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct 34903328 CACGTAGCTCAATTGGTAGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCT 34903269 Query 1745 GCCGTGTCTGCT----CCCTTCCTCGTTCGTCTAATCGGTAGGACACCAGGCTCTGGACC 1800 | ||||| ||| ||||||| ||||||||||||||||| ||| || ||||||||||| Sbjct 34903268 GGCGTGTATGCCACCACCCTTCCCCGTTCGTCTAATCGGTAAGACGCCTGGCTCTGGACC 34903209 Query 1801 TGGGGGTTGAGGTTCGAGTCCTTGGCGAGGAGCACCCACCCAGTTCTCTCGCAGGGCTGG 1860 || ||||||||||||||||||||| |||||||||||||||||| || | ||||||| Sbjct 34903208 AGGTAATTGAGGTTCGAGTCCTTGGCGGGGAGCACCCACCCAGTTCCCTTGTGGGGCTGG 34903149 Query 1861 GTCT 1864 |||| Sbjct 34903148 GTCT 34903145 Score = 179 bits (198), Expect = 1e-40 Identities = 300/424 (71%), Gaps = 15/424 (4%) Strand=Plus/Minus Query 504 ACTCCCAGCGGACTGGGAGGAGAACTACCGGCAGCCCGTTCTGAGGGCAGCCGGATACCG 563 ||| || | |||||||||| ||| ||||||| || || || || ||||| | | Sbjct 34905278 ACTACCGGAGGACTGGGAGCTGAATTACCGGCTCCCGGTCCTTTCTGCTGCCGGGTGGCT 34905219 Query 564 GTGTCAGATCCGTCAGCGC-GGTTGCCTCGGGAAGGCAACCGACGTGGACCACATCGAGC 622 |||| || || | | || | || ||| || || || |||||||| ||||||| ||| Sbjct 34905218 GTGTGAGGTC-GACGGCCCCGGCTGCGTCCGGGCTGCCACCGACGTAGACCACAAGAAGC 34905160 Query 623 GCGGCGACGACCACAGTCGCCG--CAATCTCCAGGCAGCGTGCAACCG---CTGCCACGG 677 || |||||||| |||| | ||| || || |||| | ||| ||||||||| Sbjct 34905159 CAGGGAACGACCAC--TCGCGGTCCAACCTGCA---AGCGATCTGCCGTGTCTGCCACGG 34905105 Query 678 GAAGAAGTCATCCGCAGAGGGCCATGCCCGCAAGCGGCAGTTACGAGCCAGGAGGAAGCG 737 ||||||||| |||| |||||| ||||| |||| | | ||| |||||||||| Sbjct 34905104 CAAGAAGTCAGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGGAGGAAGCG 34905045 Query 738 ACCCGCAGAACGCCACCCTGGCCGCCAGT-AGCGGGCCAGGAGCCCGCTTTCACCCAGGA 796 ||| | | ||||||||||||| || | | ||||||||||| ||| || | ||||||||| Sbjct 34905044 ACCAGAACAACGCCACCCTGGGCGTCGTTAAGCGGGCCAGGTGCCTGC-TCCACCCAGGA 34904986 Query 797 GGTGTCAGGTGGGCGAACGCGGCCCCGTTCGGAAGCGCAGCGATCAGCGCGTCCGACGCA 856 |||| | |||||| |||||||||| | | || ||| ||| | ||||| || |||| Sbjct 34904985 GGTGAC-TGTGGGCACACGCGGCCCCATCGGAAAACGCGACGAAGAACGCGTTCGTCGCA 34904927 Query 857 ACAAGGACGAGGTCCCGACCGAGAAGGTCGTGGCCATCGGGACGGTACCCGTCCCGGAAC 916 ||| ||| ||||||||| | | || | ||||||||||| ||||||||| Sbjct 34904926 ACACCCCGGAGAACCCGACCGAAACGATCTCGATGATCGGGACGGTGGAGATCCCGGAAC 34904867 Query 917 TCGG 920 |||| Sbjct 34904866 TCGG 34904863 Score = 95.1 bits (104), Expect = 4e-15 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 1868 TGACGTGTAGCTCAACCGGCAGAGCAGGCGGCTGTTAACCGCCCGGTTGGAGGTTCGAGT 1927 ||||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||| Sbjct 34903446 TGACGTGTAGCTCAAT-GGCAGAGCATCCGGCTGTTAACCGGACGGTTGAAGGTTCGAGT 34903388 Query 1928 CCTCCCTCGTCAGC 1941 ||| |||||||||| Sbjct 34903387 CCTTCCTCGTCAGC 34903374 >seq9 Length=46179939 Score = 179 bits (198), Expect = 1e-40 Identities = 269/385 (70%), Gaps = 18/385 (5%) Strand=Plus/Minus Query 41426 CCATCCAGTAGTCCCCGGTCTTCGGGGGCTCGATGCCGTACATCAGCGACACCGCGATGG 41485 |||| ||||||| ||||||||||| | ||||| ||||| ||| || ||||||| | Sbjct 16532146 CCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCG 16532087 Query 41486 CGTAGACAGCGAGCTGGAAGTCGTCGCCAGGCTGGTTGCCTGTCTTGTGGTCTCGGACCC 41545 |||| || |||||||||||||||| || || ||||| || ||||||| ||| ||||| | Sbjct 16532086 CGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTC 16532027 Query 41546 TCAGCTCCCAAACCCCTGGTGCTACTTCGACTTCCACGATGGCGTCGATGTAGCCCCGGA 41605 ||||||| | ||||| | |||| |||||||||||| || || | Sbjct 16532026 GAAGCTCCC---------------CGTCGACCACGACGACGGCGTCGATGTATCCGCGAA 16531982 Query 41606 CGGGGACTCCGTCGAGGTCGATGTCGAACGCCAGCTCGATACCTGGTGTGCCGTCAGGCG 41665 | ||| |||||||| ||||| ||||| ||||||||| |||| || ||||| || | Sbjct 16531981 CCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGG 16531922 Query 41666 CGATCCAGATGACCTCGTCGGGGTGCGACTCGGCCCAGTTGATGTACTTCTCACACTGGT 41725 | |||||| ||| | | | | | ||| ||| || | ||||||| ||| | Sbjct 16531921 TCACCCAGATCTCCTGGCCCG---GAGTCTCCCGCCACGCGAAGAACTTCTCGACCTGCT 16531865 Query 41726 CCTGGCCGATGTCCTCGCGGCGGGTGATGTCTCGCTTGCCCCGGTACGGGCCCGAGGCGA 41785 || |||||| | | ||||| ||||||||||| || |||||| || || Sbjct 16531864 CCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACG 16531805 Query 41786 ACCACCAGTCGAAGTTCGGTGTGTC 41810 |||||| ||||||||||| || || Sbjct 16531804 TCCACCACTCGAAGTTCGGGGTCTC 16531780 Score = 116 bits (128), Expect = 1e-21 Identities = 142/190 (75%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 40586 ACCCATTCCTTTCCGTTCCAGCGCCTACCGTCCGGGTAGGCGATGACGACCTCCCGCT-G 40644 ||||| ||||| |||||||| |||| |||||| ||||||||||||||||| ||||| | | Sbjct 16532617 ACCCACTCCTTGCCGTTCCACCGCCGACCGTCTGGGTAGGCGATGACGACTTCCCGGTCG 16532558 Query 40645 GGGTTCTCGTGCCTTGTGGGTCTGAGCGAACCGTGTCGCCGCCGTGAGCGACGGGAACGG 40704 || ||| | | |||| | |||||||||| |||||| ||| ||||||||| Sbjct 16532557 GGCCGCTCCT-CGCTGTGAGCGCGAGCGAACCGGAACGCCGCTTCTGGCGTCGGGAACGG 16532499 Query 40705 CCAGCGCGACGGGTGTGCCGCCGTGTGCCAGGAGGGGAGCCCAGGGATGGGCCCCATCTC 40764 ||||||||| || || |||| | |||||| || | | ||||| || |||| ||| Sbjct 16532498 CCAGCGCGAGGGCTGAGCCGACTGGTGCCACTTCGGCATGTCTGGGATCGGACCCAGCTC 16532439 Query 40765 GACGT-GGTG 40773 |||| |||| Sbjct 16532438 CACGTAGGTG 16532429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159536593129472