Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15]
1,376 sequences; 930,507,853 total letters
Query= NC_021308.1
Length=52617
Score E
Sequences producing significant alignments: (Bits) Value
seq8 601 1e-167
seq18 536 4e-148
seq9 143 9e-30
>seq8
Length=24646021
Score = 601 bits (666), Expect = 1e-167
Identities = 916/1295 (71%), Gaps = 63/1295 (5%)
Strand=Plus/Minus
Query 12603 CTGCAGAACGAACTGGGGCAAGCCTGGATCGAACTGGAGAAGGTCTACACCACCATCGAC 12662
||| ||||||| ||||| || || |||||| ||| ||||| | | ||| | | | |
Sbjct 19507648 CTGGAGAACGAGCTGGGACAGGCTTGGATCCGGCTGCAGAAGCTGGAGACCTCGCTTGCC 19507589
Query 12663 GCCAAGGTCCCTTCGGANNNNNNNNNNNNNNTCGTGGAGTTCCTGAAGGGCGAGGACAAA 12722
|| ||||| || || |||| || || || |||||||||||
Sbjct 19507588 GCAAAGGTTCCCAGCGACAAGGTGCTCGCGTTCGTTGACATCTTGCAGGGCGAGGACGCT 19507529
Query 12723 GAGTCCATCACCGCGTCAGTGCAGTCTG-CCGCGAAGTTGTTCGGCGGTTGGGAGACAA- 12780
|| || ||| ||| ||| | | || || |||| | | ||||||||| || | |
Sbjct 19507528 GACTCGATCGCCGAGTCCGCGAAGAAGAACCTCGAACT-GATCGGCGGTTTCGACAAGAA 19507470
Query 12781 --CCGATCCCGCTGTCGACCCCACCCAAGGCAAGGGCGGT-GGCACCCCGCTGCCGCTCA 12837
| | | ||| | ||||||||||||| ||| || ||| |||| ||||||||||
Sbjct 19507469 GCCGGTTTCCGGTTTCGACCCCACCCAGGGCTTCGGTGGTCGGCAGGAA-CTGCCGCTCA 19507411
Query 12838 ATGGCGACAAGCTGATGATGGCGTTGAACGCCAAACTCGGCCTC-------GTCTGAGCC 12890
| || ||| | | | | || |||| | | |||||| || ||| ||||
Sbjct 19507410 ACGGTGACCCGATCCTCAACGCCATGAAGGGCGTTCTCGGCATCAAGTGATGTC-GAGCT 19507352
Query 12891 AAATACCAA-CTAACCCAAGGAGATAGAGAGTCATGGCCGCAGGCACTGACTTCGCAGTC 12949
|| ||| | | ||||||||| || |||||||||||||||| ||||||||
Sbjct 19507351 GAAACCCATTCCTAGACAAGGAGATTAGCAG--ATGGCCGCAGGCACTGCTTTCGCAGTT 19507294
Query 12950 AACCACAGCCAGATCGCTCAGACTGGCGACTCGATGTTCCAGGGCACCCTGGAACCCGAG 13009
| ||| |||||||| ||||| ||||| | |||||| ||||| |||||| ||||||
Sbjct 19507293 GATCACGCTCAGATCGCCCAGACCGGCGATACCATGTTCAAGGGCTACCTGGAGCCCGAG 19507234
Query 13010 GAAGCACAGGACTACTTCGCCGTAGCGGAGAAGACCTCCATCGTTCAGAAGCTCGCCCGC 13069
| || |||| |||||||||| || ||||||||||| ||||| ||| || ||||||
Sbjct 19507233 CAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACCTCGATCGTCCAGCAGTTCGCCCAG 19507174
Query 13070 AAGATCCCGATGGGTACCACGGGCGTGAAGATCCCCCACTGGACCGGCGATGTCGCTGCC 13129
||| | |||||||||||||||||| ||||||||| |||||| |||||| || ||||
Sbjct 19507173 AAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCGCACTGGGTCGGCGACGTGAGTGCC 19507114
Query 13130 CAGTGGATCGGTGAAGGCGACATGAAGCCGATCACCAAGGG-----TGACTTCGGCGTGA 13184
|||||||||||||| || ||||||||||| ||||||||||| |||||||| |
Sbjct 19507113 CAGTGGATCGGTGAGGGTGACATGAAGCCCATCACCAAGGGCAACATGACTTCGCAG--- 19507057
Query 13185 AGCAGGTCGAGCCGCACAAGATCGCGACGATCTTCATCGCATCTGCGGAAACCGTCCGTG 13244
| || ||| ||| ||||||||||||||||||||| | || |||||||| ||||||||||
Sbjct 19507056 ACCA--TCGCGCCCCACAAGATCGCGACGATCTTCGTGGCGTCTGCGGAGACCGTCCGTG 19506999
Query 13245 CGAACCCGCACAACTACATCGGCACGATGCGGTCCAAGATCGGTACCGCCATCGCGCTGA 13304
| ||||| ||||||| | || || ||||| ||||| | | |||||| ||||| ||
Sbjct 19506998 CCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTGGCGACCGCCTTCGCGATGG 19506939
Query 13305 CGTTCGACTCGGCTGCTCTGTGGGGCACCGACAGCCCGTTCGACAAGTACCTGGCGCAGA 13364
|||||||| || || || |||||||||||||||||| | ||| | | ||||
Sbjct 19506938 CGTTCGACGGCGCGGCGATGCACGGCACCGACAGCCCGTTCCCGACCTACATCGGTCAGA 19506879
Query 13365 CGACCAAGTCGGTCTCTCTCAGTGACCCGGACGGTGCGGGTACCGATGAAACCCTCACGG 13424
| |||||| | |||| | |||| | |||||| |||| ||
Sbjct 19506878 CCACCAAGGCCATCTCGATTGCTGACACCACCGGTGCCACGACCG-TG------------ 19506832
Query 13425 CCTACGACGCTCTCGGCGTCATCGGCCTGGGCTTGCTCGTCAACGACGGCAAGAAGTGGA 13484
|||||| | | ||| | ||||||| || |||| || |||||||||||||||||||
Sbjct 19506831 --TACGACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGTGAACGACGGCAAGAAGTGGA 19506774
Query 13485 ACGGCACCCTGCTGGACGACATCGCGGAGCCGATCCTCAACGGGGCCAAGGACGCCAATG 13544
| |||||| |||||||||||| | ||||||||||| ||||| || |||||| || |
Sbjct 19506773 CCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAACGGCGCGAAGGACCAGAACG 19506714
Query 13545 GCCGTCCCCTGTTCGTGGAGAGCACCTAC---GAGGGCCTGACCGCCCCGTACCGCGAGG 13601
| || || |||||| | ||| |||||| |||| | || ||||| ||| ||
Sbjct 19506713 GTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAGGCCGCGA---GCCCGTTCCGTTCGG 19506657
Query 13602 GTCGCATCCTGTCGCGTCCCACGGTCCTGTCGGACCACGTCGCGAACACCGCTCTGACTC 13661
| || ||| | | ||||| || |||| |||||||||| | | | | |
Sbjct 19506656 GCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGTGGA--------GGGCAC 19506605
Query 13662 CTGACGTTCTGGGCTTCCAGGGCGACTTCAGCCAGATCGTGTGGGGCCAGGTCGGCGGTC 13721
| ||| || |||||| ||| |||||| |||| || | ||||||||| |||||||||
Sbjct 19506604 C--ACGGTC--GGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGCCAGATCGGCGGTC 19506549
Query 13722 TGTCCTTCGACGTTTCGGATCAGGCGACTCTGAACCTCGGCACCAAGGCCGATCCTG-AG 13780
||||||||||||| ||||||||||||| |||||||| |||||| | || || | |
Sbjct 19506548 TGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTCG-AGAGCCCGAAC 19506490
Query 13781 TTCGTGTCGCTGTGGCAGCACAACCTCGTCGCTGTTCGTGTGGAGGCCGAGTTCGGCCTG 13840
||||| |||||||||||||||||||||||||| || ||||| ||||| |||| || |
Sbjct 19506489 TTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGCTGAGTACGCGTTC 19506430
Query 13841 CTCATCAACGATGAGGATGCGTTCGTCAAGCTGAC 13875
| | |||||| | || ||||||||| |||||
Sbjct 19506429 CACTGCAACGACGCCGAGGCGTTCGTCGCTCTGAC 19506395
Score = 132 bits (146), Expect = 2e-26
Identities = 318/481 (66%), Gaps = 35/481 (7%)
Strand=Plus/Minus
Query 11926 AAGGGCTGGGCCAGGGTTGCGAC-GGGCGATGAGACGTGTGCCTGGTGCCTGATGCTCAT 11984
||||||||||| ||||| || || ||||| || || || |||||||| |||||||| ||
Sbjct 19508365 AAGGGCTGGGCGAGGGTCGCCACCGGGCGC-GAAACATGCGCCTGGTGTCTGATGCTGAT 19508307
Query 11985 CTCCCGAGGGCCTGTGTACGTCGGTGCGGAATCCGCCGGCCTGGACCTGGACGACGACAC 12044
||||| || || | |||| | ||||| || || || |||| ||| ||| ||
Sbjct 19508306 TTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGACACCGAGAC 19508247
Query 12045 CG---------------------CTGCCCGCATGATCGCGGG-----CGGCGAGGATGTC 12078
|| ||| |||| |||| | | | |||| || |
Sbjct 19508246 CGTGGTCGACCTCTGGAACGAGGCTGGCCGC--GATCTGGAGAAGTTCCGCGAAGAGACC 19508189
Query 12079 AGGCCCTTCATGGAGGAGTGGCACACCGGGTGCGACTGCAAGGTCGTCCCGGTGTTCGAC 12138
| |||| ||| |||||||||||| | |||||||||||| ||| || || || ||||||
Sbjct 19508188 AAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGTCTTCGAC 19508129
Query 12139 ATCGGGTCATGGTCCGGGTTCAACGCCTGGAAACGTGCTGAATCCCTATGGGAGGACGCC 12198
| | | ||| |||| ||| | |||| ||| || ||| |||||
Sbjct 19508128 GTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGATCGACGCT 19508069
Query 12199 AGTTTGGAGGCACGAGCACTCATCGAATCCGGTGAGGCCCGTACCGACAACCTGAACAAG 12258
| || || | ||||| | ||| || ||||||| || | ||| |||||||
Sbjct 19508068 GGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGAGAACAAG 19508009
Query 12259 GAGACGGTAAACGCTCTCCGTCGTCGCCTCGAACGTGGCGACGTATCTATGTCTGACTTC 12318
|||||| | |||||||||||||| ||| | | || ||||| | | ||||| |||| |
Sbjct 19508008 GAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCGAGTTCGCAATGTCCGACTAC 19507949
Query 12319 GCCGTAGCGGCGTAGTCACCACCCGACCCCCTGGTGGGGTC--CAACCATGCCCAGGAGG 12376
|| | || ||||| | | ||||| |||| |||||| || |||||||||||||||||
Sbjct 19507948 GCACTCGCTGCGTA---ATCCCCCGAACCCCAGGTGGGTTCATCAACCATGCCCAGGAGG 19507892
Query 12377 C 12377
|
Sbjct 19507891 C 19507891
Score = 114 bits (126), Expect = 4e-21
Identities = 300/442 (68%), Gaps = 23/442 (5%)
Strand=Plus/Minus
Query 14237 CGAACGGATGATCAAGCGCCGGATCAGGAATCTGGACGCGCAGATCACCGCAGGGACCAT 14296
||| || |||||| ||| |||||| |||||||||| | | | | |||| ||
Sbjct 19506043 CGAGCGCATGATCCGGCGTCGGATCCCAGATCTGGACGCCAGGGTGTCTTC--GGAC-AT 19505987
Query 14297 CTCCCAGGCCGACGTGGTGCAGGTCGAGGCCGACATGGTGTTGCGGCTTCTCCGCAACCC 14356
|| || |||||| || | | ||||||||||| |||| |||| || | || |||||
Sbjct 19505986 CTTCCGGGCCGATCTGATCGACATCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAACCC 19505927
Query 14357 GGAGGGCTTCACCCAGGAGACGGACGGCAACTACACGTACATGCTG-AGCCAGAGGTTGG 14415
|||||||| | | |||||| ||||| ||||| ||| ||| || | || | |
Sbjct 19505926 GGAGGGCTACCTCTCGGAGACCGACGGGGCGTACACCTACCAGCTCCAGGCTGATCT--G 19505869
Query 14416 CCTCTGG-CGTTCTGGAGGTGCTCCCCGATGAGTGGGAGTCCCTTGGCATTACGCGTAA- 14473
||| || | || | | || ||| |||||| | || | || | | ||
Sbjct 19505868 TCTCAGGGCAAGCTCGTCATCCTTGGCGAAGAGTGGACGACCTTGGGAGTCAACCGACTC 19505809
Query 14474 --GGGCATGTTCACCCTCGTCCCGACGTTCGTGATGCCGACATGAGCGCGAGCGACAGGC 14531
| |||||| |||| ||||||||| ||||||||||||||||||||| |||||| |
Sbjct 19505808 TCGCGCATGTCCACCATCGTCCCGAACATCGTGATGCCGACATGAGCGCCAGCGACGTTC 19505749
Query 14532 AGCCGCCT--GGTC-CGTACCCG-GACGATTTCACGAAGGCCGTACGGCCAGAGCACGTC 14587
||| | || | || ||||||| | |||| | ||| || || || || |||
Sbjct 19505748 AGCGGGCTCCGATCAAGTACCCGCCGGGGTTTCTC-CTGGCGGTCACACCTGACCAAGTC 19505690
Query 14588 GAC-CCGCAGAAGTGCGATCACGA----GATCGGC--ATCTGCTACTGCGTGCATGACTG 14640
||| |||| || |||||| ||||| |||| | ||||||||||||| || |||||
Sbjct 19505689 GACGCCGC-GATGTGCGACCACGAAGCGGATCCTCCGGTCTGCTACTGCGTCCACGACTG 19505631
Query 14641 GCGCATCGAATGGGGCAACCTC 14662
||||||||| | |||||| ||
Sbjct 19505630 GCGCATCGAGTTCGGCAACGTC 19505609
>seq18
Length=36757632
Score = 536 bits (594), Expect = 4e-148
Identities = 650/889 (73%), Gaps = 57/889 (6%)
Strand=Plus/Plus
Query 34683 GAACCTGATGCGCCGCTTGAAGTACTTGGCGAAGATCGGGTGGATACCCTCACTCACACC 34742
||||| ||||||||| |||||||| || |||||||||||||||||||||||| || ||
Sbjct 22717074 GAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACTGACTCC 22717133
Query 34743 AGGCAGCTTCGCAATGGTCCCCGTAGGGGCCACTGTGCGGGTTTTGACCGGCACCGGGAT 34802
||||| |||||| |||||||| || |||||||| ||||| | |||||||||||||||||
Sbjct 22717134 AGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCACCGGGAT 22717193
Query 34803 GCGGAGTTGGTGGGAGTAGTTCACTGCGGCCTGGTCGACCTCAGAGGCTAGATCCCGCAG 34862
|| | | ||| | | | | | || || ||||||||||| ||| | |||||||
Sbjct 22717194 CCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTCCCGCA- 22717252
Query 34863 CAGACTCCG--GAACCACTTGTCCCGGGGTGCCTGGGAGTACTTCTTCCCCGACATCGCC 34920
||| || ||||| |||||| | ||||||||| || ||| | || | || |||
Sbjct 22717253 -AGAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAGGGCC 22717311
Query 34921 AGGAACGATGCGACACCGAGGTGCCCGACACCGATGCGCCTGTTCCGATCCAAGACCTCT 34980
| | || || || ||||||||||| ||||||||||||| ||| ||||||| ||||||
Sbjct 22717312 AAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAACCTCT 22717371
Query 34981 CGGCTCTTGGGATCGGCCACCGGGCTGAACGTAGCCCGGATCAGGAACCGCGTCACCAGC 35040
|||||||| ||||| || |||| |||||| |||||||||||||||||||||| |||
Sbjct 22717372 CGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCATCAGA 22717431
Query 35041 CGGTGAGCGCGGATCATGTCGATGGCGTCGTACTTCCCGTTGTCCTTGACGAACGCGGCG 35100
||||| || ||||||| ||||||| |||| ||||||| ||| |||||||||| |||
Sbjct 22717432 CGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGGCGTCGGTGACGAACGCCGCG 22717491
Query 35101 AGGTTGATGTGGCCGAGGTTGCACGGCTCCCACGCTTCGAGAGTGATCTCCCCGCACGGG 35160
||||||||||| || |||||||| |||||||||| || || ||||||||||||||||||
Sbjct 22717492 AGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCCGCACGGG 22717551
Query 35161 TTGGTACAGATGACCTCGTTCGGCTCTCCGTCGTTGGAGAGGCTCGAGTCCCAGAACCCC 35220
||||| |||| ||||||||| ||||| ||| ||||||| ||||| |||||| | ||||
Sbjct 22717552 TTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCACATCCCC 22717611
Query 35221 GGCTCCCCGTTCTTCACCATGCCCTCGGTGATGGCCTTGAGGATC------TCCTGCGCC 35274
||||| ||||| || ||||||| || ||||| || | | ||| ||
Sbjct 22717612 GGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGCCTTCGTG 22717671
Query 35275 CAGTTCCCGTTGA-----TGGA-GGGATCTTTGACCTCGGCCCAGAACTCCTGATCCACC 35328
|| | ||||| | || ||| | ||| || | ||||||| | | ||||||
Sbjct 22717672 GAGCGCGGGTTGAGCGGGTCGACAGGAGCCTTGGCCAGGCTCCAGAACGCATCGTCCACC 22717731
Query 35329 ACAACAGAGATGTTCGTCGTCCAGTGCTTGCCCGTCTCGGCCTTGCAGTTGATGAA---C 35385
| || ||||||||||| |||||||| || | || |||| |||| |||| |
Sbjct 22717732 TCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTC 22717791
Query 35386 TCGA---AGAT------------------GTGGGGA-----------------TCAGCCC 35407
|| | |||| ||| || || ||||
Sbjct 22717792 TCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCTGCCAGTCCGCCC 22717851
Query 35408 AGTGCATCATCGCCATACGGGCCGAACGACGCACACCACCGGCCACGACACACTGAGCGA 35467
|||||||||||||||| || ||||| || || ||||| |||||||| |||||||| ||||
Sbjct 22717852 AGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCACACACTGCGCGA 22717911
Query 35468 TGGCATGGTCGATCTCCATCGCCTTGATGCCGGTGAGGCCCCCACCGTC 35516
|||| ||||||||||||||||| | || ||||| || | ||||| ||
Sbjct 22717912 TGGCGTGGTCGATCTCCATCGCATCGAGACCGGTCAGCGCACCACCTTC 22717960
Score = 143 bits (158), Expect = 9e-30
Identities = 301/447 (67%), Gaps = 35/447 (8%)
Strand=Plus/Plus
Query 45333 TCACGCGTCCAGTGCGTGAGATCGTAAGGGTACGT---------TGCCTTTCCGGTCTTG 45383
||||||||||| | ||| || ||||| || | || |||||| || ||||
Sbjct 22718134 TCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTTGCCCTTCTTC 22718193
Query 45384 CCCATCC---AGTAGTCACCGGAC---GGTACCGACTCCCCGTACATGATCTCGATGGCT 45437
|||| | ||||||| |||| | || || | ||||| | ||| ||| ||
Sbjct 22718194 CCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCG 22718253
Query 45438 ACTTTGTAGACACCAAGCTGGAAGTCGTCACCGGGCTGGTTGCCCGTCTTGTGATCCCTC 45497
| ||| || || ||||||||||||||||| || ||||| || ||||||| ||||
Sbjct 22718254 AGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGG 22718313
Query 45498 ACTCGAAGCTGGTACACACCCGGCTTGACCTCGACCACGATGATCGCGTCGATGTACCCA 45557
|||||||||| ||| | |||||||||| || ||||||||||| ||
Sbjct 22718314 ACTCGAAGCT--------CCC-------CGTCGACCACGACGACGGCGTCGATGTATCCG 22718358
Query 45558 CGCACCGGGATGCCGTCAAGCTCGATGTCGAACGCAAGCTCGATGGCGGGCGTCCCATCC 45617
|| ||| |||| ||||| |||||||| ||||| |||||||| || ||||| || |||
Sbjct 22718359 CGAACCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCC 22718418
Query 45618 GGCGTGAACCAGATGACCT-CCTCGGTGTGCTTCTGGACCCAGTTGATGTACTTCTCGCA 45676
|| || | |||||| ||| | ||| || || | | ||| || | ||||||||
Sbjct 22718419 GGGGTCACCCAGATCTCCTGGCCCGGAGT-CTCCCG---CCACGCGAAGAACTTCTCGAC 22718474
Query 45677 CTGCCCCAGGCCGATCTCCATCCGACGCGGGATGTCCTTGAGGGCGTCGTATGGCCCAGA 45736
|||| ||||||||| ||| ||| |||||| | ||| ||| || |||||
Sbjct 22718475 CTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGACCAGA 22718534
Query 45737 AGCGAACCACCACTGGAAGTTTGGCGT 45763
|||||||| |||||| || ||
Sbjct 22718535 CCACGTCCACCACTCGAAGTTCGGGGT 22718561
>seq9
Length=46179939
Score = 143 bits (158), Expect = 9e-30
Identities = 301/447 (67%), Gaps = 35/447 (8%)
Strand=Plus/Minus
Query 45333 TCACGCGTCCAGTGCGTGAGATCGTAAGGGTACGT---------TGCCTTTCCGGTCTTG 45383
||||||||||| | ||| || ||||| || | || |||||| || ||||
Sbjct 16532210 TCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTTGCCCTTCTTC 16532151
Query 45384 CCCATCC---AGTAGTCACCGGAC---GGTACCGACTCCCCGTACATGATCTCGATGGCT 45437
|||| | ||||||| |||| | || || | ||||| | ||| ||| ||
Sbjct 16532150 CCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCG 16532091
Query 45438 ACTTTGTAGACACCAAGCTGGAAGTCGTCACCGGGCTGGTTGCCCGTCTTGTGATCCCTC 45497
| ||| || || ||||||||||||||||| || ||||| || ||||||| ||||
Sbjct 16532090 AGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGG 16532031
Query 45498 ACTCGAAGCTGGTACACACCCGGCTTGACCTCGACCACGATGATCGCGTCGATGTACCCA 45557
|||||||||| ||| | |||||||||| || ||||||||||| ||
Sbjct 16532030 ACTCGAAGCT--------CCC-------CGTCGACCACGACGACGGCGTCGATGTATCCG 16531986
Query 45558 CGCACCGGGATGCCGTCAAGCTCGATGTCGAACGCAAGCTCGATGGCGGGCGTCCCATCC 45617
|| ||| |||| ||||| |||||||| ||||| |||||||| || ||||| || |||
Sbjct 16531985 CGAACCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCC 16531926
Query 45618 GGCGTGAACCAGATGACCT-CCTCGGTGTGCTTCTGGACCCAGTTGATGTACTTCTCGCA 45676
|| || | |||||| ||| | ||| || || | | ||| || | ||||||||
Sbjct 16531925 GGGGTCACCCAGATCTCCTGGCCCGGAGT-CTCCCG---CCACGCGAAGAACTTCTCGAC 16531870
Query 45677 CTGCCCCAGGCCGATCTCCATCCGACGCGGGATGTCCTTGAGGGCGTCGTATGGCCCAGA 45736
|||| ||||||||| ||| ||| |||||| | ||| ||| || |||||
Sbjct 16531869 CTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGACCAGA 16531810
Query 45737 AGCGAACCACCACTGGAAGTTTGGCGT 45763
|||||||| |||||| || ||
Sbjct 16531809 CCACGTCCACCACTCGAAGTTCGGGGT 16531783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 168250050749248
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