Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_021533.1 Length=45942 Score E Sequences producing significant alignments: (Bits) Value seq18 542 8e-150 seq8 291 2e-74 seq9 199 1e-46 seq1 127 6e-25 >seq18 Length=36757632 Score = 542 bits (600), Expect = 8e-150 Identities = 660/904 (73%), Gaps = 68/904 (8%) Strand=Plus/Plus Query 33788 GTCTGGAACTGGTCTTCGTCCAAGAGCGAGAACCGGATTCGGCGGTTGAAGTACTTGGCG 33847 ||| |||||||||| | ||||| | |||||||||||| || ||| |||||||| || | Sbjct 22717045 GTCAGGAACTGGTCGTTGTCCAGCACCGAGAACCGGATGCGCCGGATGAAGTACCGGGAG 22717104 Query 33848 AAGATCGGGTGGATACCCTCACTGACACCAGGCAGCTTCGCGATGGTCCCCGTGGGAGCC 33907 |||||||||||||||||||||||||| ||||||| ||||||||||||||| || || ||| Sbjct 22717105 AAGATCGGGTGGATACCCTCACTGACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCC 22717164 Query 33908 ACCGTCCGCTTCTTCACCGGCACCGGGATGCGAAGCTCATGGGCGAACCTCTCAGCGGC- 33966 ||||| |||||||| |||||||||||||| || | ||||||| |||| ||| || || Sbjct 22717165 ACCGTGCGCTTCTTGACCGGCACCGGGATCCGCAACTCATGGCTGAACTCCTCGGCCGCT 22717224 Query 33967 CTGATCGACCTCAGATGCCAGTTCCCGCAGCAGGTTCCGG--AACCACCGGTCCTTGGGT 34024 ||| |||||||||| |||| ||||||| || ||| |||| | ||| |||| Sbjct 22717225 CTG-TCGACCTCAGCGGCCATCTCCCGCA--AGAAAGCGGTGAACCGCTTGTCTCCGGGT 22717281 Query 34025 GCCTCGGAGTACTTCTTCCGAGCCATCGCCAGGAACGACGCCACACCCAGGTGGCCGACG 34084 |||| || ||| | | | || |||| | || ||||| || ||||| || || Sbjct 22717282 GCCTGCGAATACCTACGGCCTGTCAGGGCCAAATAGGAGGCCACTCCGAGGTGCCCAACA 22717341 Query 34085 CCGATGCGTCGGTTCCGGTCCAGCACTTCCCTGGACTTCGGGTCCGCGACCGGGCTGAAC 34144 |||||||| ||||| || ||||| || || | | |||||| || ||||||| |||| Sbjct 22717342 CCGATGCGCCGGTTGCGATCCAGAACCTCTCGGCTCTTCGGATCAGCGACCGCTGAGAAC 22717401 Query 34145 GTCGCCCGGATCAGGAACCGAGTCATCAGCCGGTGCGCCCGGAGCAGGTCGAGGTAGTCG 34204 |||||||||||||||||||| |||||||| ||||| || |||| |||||||| ||||||| Sbjct 22717402 GTCGCCCGGATCAGGAACCGCGTCATCAGACGGTGGGCTCGGATCAGGTCGATGTAGTCG 22717461 Query 34205 ACCTTGCCGTTCTCCTTGACGAACCCGGCCAGGTTGATGTGGCCCAGGTTGCAGGGCTCC 34264 ||| ||| || |||||||| | || ||||||||||| || ||||||||||||||| Sbjct 22717462 GTCTTCCCGGCGTCGGTGACGAACGCCGCGAGGTTGATGTGCCCTAGGTTGCAGGGCTCC 22717521 Query 34265 CACGCTTCGAGCGTGATCTCCCCGCACGGGTTGGTGCAGATGACCTCGTTGGGCTCGCCC 34324 |||| || ||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 22717522 CACGGCTCCAGCGTGATCTCCCCGCACGGGTTGGTGCAGACGACCTCGTTGGGCTCACCG 22717581 Query 34325 TTGTTCGACAGCGACGAGTCCCAGAACCCAGGCTCGCCGTTGTTGACCATGCCCTTGGTG 34384 ||| ||||| |||||| | ||| |||||||||||| || |||| || | Sbjct 22717582 ACGTTGGACAGGCTGCTGTCCCACATCCCCGGCTCGCCGTTGCGTACGGCTCCCTCGGAG 22717641 Query 34385 ATGCCGTCCAGGACGTACAGGGCGTT------GCCGCTGTTG-GCGG--CGACCGTATC- 34434 | | | ||| || | || || || |||| |||| |||| | | | Sbjct 22717642 AGAGCCTTCAGCACCCGGTGTGCCTTCGTGGAGCGCGGGTTGAGCGGGTCGACAGGAGCC 22717701 Query 34435 -----------CCAGAAGTCCTGATCGACCTCGACCGAGATGTTGGTCGTCCAGTGCGAA 34483 |||||| | | || ||||||||||||||||| || |||||||| || Sbjct 22717702 TTGGCCAGGCTCCAGAACGCATCGTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGAT 22717761 Query 34484 CCGGTGTCCTGCTTGAT---------CGT---CAG------------------------- 34506 ||| ||||||||||||| ||| ||| Sbjct 22717762 CCGCTGTCCTGCTTGATGTTGGTGAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGT 22717821 Query 34507 ----GAACTGGTCGATCTGCGGGTCGTTCCAGTGCATCATCGCCATGCGCGCCGACCGGC 34562 |||| ||| |||| ||| ||||||||||||||||||||| |||||||||| Sbjct 22717822 TGGTGAACGTCTCGCCCTGCCAGTCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGC 22717881 Query 34563 GCACACCGCCAGCGACGACACACTGTGCGATGGCGTGGTCGATCTCCATCGCATCCAGGC 34622 | ||||| || || || |||||||| ||||||||||||||||||||||||||||| || | Sbjct 22717882 GAACACCTCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCATCGAGAC 22717941 Query 34623 CGGT 34626 |||| Sbjct 22717942 CGGT 22717945 Score = 199 bits (220), Expect = 1e-46 Identities = 515/771 (67%), Gaps = 43/771 (6%) Strand=Plus/Plus Query 42524 GGGCAGGCGTAGCTCACGTCGCAGAACCGGCAGGTGTCCGGGTCGGGTTTCGGATCGAAC 42583 ||||| |||| ||| || ||||| ||| ||||||| || || ||| |||||| Sbjct 22718023 GGGCAACTGTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAAC 22718082 Query 42584 CTCTCGGCCCGGATGTTCTCGTCCAGCTCCTTGAACTTCTCGGTGACCCGCTCTCGGGTC 42643 || ||| ||| || || | | | ||||| |||||||| || || ||| Sbjct 22718083 ATCGAGGCTGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTC 22718142 Query 42644 CACTCGGTCAGGTCGAACGGGTAGGTCGGCTT---------GCCGGTCCTGCCCATCC-- 42692 |||| ||||||||| | || | ||||||||| ||| || | |||| | Sbjct 22718143 CACTTCGTCAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTTGCCCTTCTTCCCCACCATG 22718202 Query 42693 -AGTAGTCACCGGAC---GGGGCGAAGACTCCGTAC-TCGTCCTCCAGCGCGACCTTGTA 42747 ||||||| |||| | || || ||| ||||| || || | | ||||| | ||| Sbjct 22718203 AAGTAGTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCG-CGACCGCGAGCGCGTA 22718261 Query 42748 CACGCCGAGCTGGAAGTCGTCACCGGGCTGGTTGCCGGTCTTGTGGTCTCGGACGTAAAC 42807 |||||||||||||||||||||||| || ||||| |||||||||| ||| ||||| || Sbjct 22718262 CACGCCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAG 22718321 Query 42808 CTCGTCGCCGCAACCGGATCGGAGCACGGCGTCGATGTAGCCTCGGACCAGGACGCCGTC 42867 ||| || || ||| || |||||||||||||| || || ||||||| ||||| Sbjct 22718322 CTCCCCGTCG--ACC----ACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTC 22718375 Query 42868 CAGGTCGATGTCGAACTCAAGCTCGATGCCTGGTGTCCCATCCTCTGCGATCCAGATGAC 42927 || ||||| ||||| | |||||||| |||| || || ||| | | |||||| | Sbjct 22718376 GAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTC 22718435 Query 42928 CTCGTCGCGATGGCTGGTGGCCCAGTTGATGTACTTCTCGACCTGCTCCAGGCCGATGTC 42987 || | | || | || | ||| || | |||||||||||||||||||||||| | Sbjct 22718436 CT-GGCCCGGAGTCTCCCG--CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGT 22718492 Query 42988 ATACCTCCGTGCGATGTCAAGTTGACCGCCGTAACGGCCACTGGCGA--ACCACCACTCG 43045 |||| || ||||||| | |||||| || |||| | | | | | |||||||||| Sbjct 22718493 GTACCGGCGCTCGATGTCTCGCTGACCGTTGT-ACGGAC-CAGACCACGTCCACCACTCG 22718550 Query 43046 AAGTTCGGCGTGATCTCGCACGCCGCGTCGATGTGCTTCTTGTAGGACTCCTTGAAGACT 43105 |||||||| || |||| || | | || || |||| | ||| | Sbjct 22718551 AAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATG 22718610 Query 43106 TCCTGGGCCTCTTCGAGAGAGAGGGAGCGCCCCG-ACCGCTCCCATGCCTCGATGGCTT- 43163 |||| |||||| || || | || | || ||| | ||||||| |||||| || | Sbjct 22718611 TCCTTGGCCTCGTCAAGCGTCAGCG-GCATGCCGTAGGACTCCCATACCTCGACCGCCTC 22718669 Query 43164 --------CGTGAACCGCACTACCCTGCGCTGTCCACGCGGCCGGCCTCTGCCACGCCTT 43215 |||| | |||| | ||||||| ||| || || |||| ||||||| |||| Sbjct 22718670 AGCGACAGCGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTT 22718729 Query 43216 GTCGATGCGGGCCAATTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGA 43265 |||||| || || | ||||| || | |||||| | |||||| |||| Sbjct 22718730 GTCGATCCGAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGA 22718779 Score = 80.6 bits (88), Expect = 8e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 43832 CCATATCATCCTCCCCTCGTCGGTCAGGTCCGTGTAATCGTTGACCCGGATCAACAGGTC 43891 ||| |||||| ||||||||||||| || |||| ||||||||||||||||||||||| Sbjct 22719327 CCAGATCATCTCTCCCTCGTCGGTCAAGTTGGTGTGCTCGTTGACCCGGATCAACAGGTC 22719386 Query 43892 GCCGTCCTC 43900 | ||||||| Sbjct 22719387 GTCGTCCTC 22719395 >seq8 Length=24646021 Score = 291 bits (322), Expect = 2e-74 Identities = 698/1048 (67%), Gaps = 87/1048 (8%) Strand=Plus/Minus Query 11216 CCTGAAGCCGGAACAGGCTCAGGACTACTTCAAGGAGATCGAGAAGACCTCCATCGTCCA 11275 |||| |||| || ||||| |||| |||||| ||| |||||||||||| |||||||| Sbjct 19507246 CCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACCTCGATCGTCCA 19507187 Query 11276 GCGGATCGCCCGGAAGATTCCGATGGGTCCGACCGGCATCGCCATCCCCCACTGGACCGG 11335 || | |||||| |||| | ||||||||| | || ||| ||||| |||||| ||| Sbjct 19507186 GCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCGCACTGGGTCGG 19507127 Query 11336 TGCGGTCACCGCGTCGTGGACCGGTGAGGCTGAGCGCAAGCCCCTGACCAAGG------T 11389 | || | || ||||| |||||||| ||| |||||| | ||||||| | Sbjct 19507126 CGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACCAAGGGCAACAT 19507067 Query 11390 TCGTTCGGTCAGAAGGAACTGAAGCCGGTGAAGATCACCACGATCTTCGCCGAGTCGGCT 11449 |||| |||| | ||| |||||| | |||||||||| | ||| || Sbjct 19507066 GACTTCG--CAGACCA---TCGCGCCCCACAAGATCGCGACGATCTTCGTGGCGTCTGCG 19507012 Query 11450 GAAGTCGTGCGTCTCAACCCGCTGGGCTACCTGGAGACCATGCGGACCAAGATCGCTGAG 11509 || ||| ||| |||||| |||||||| |||||||| |||||| | || Sbjct 19507011 GAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTGGCGACC 19506952 Query 11510 GCCATCGCGCTGAAGTTCGACCTGGCCGCGATCCACGGCATCAGCGCCCCGAGCGAGTTC 11569 ||| ||||| || ||||||| || ||||| ||||||| | | |||| ||| Sbjct 19506951 GCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGACAGCCCG------TTC 19506898 Query 11570 GAGGGCTACCTGGCCGAGACCGCCAACGAGGTGTCGCTGGTGGATGTCGACCAG-GCCAC 11628 | |||| | | ||||| |||| | | ||| | | || | ||| | ||||| Sbjct 19506897 CCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACC-ACCGGTGCCAC 19506839 Query 11629 GGCCA---ACGCCCAGGGCAACGCCTACCTGGCGATCAACAACGCGCTGTCGATCCTGGT 11685 | || ||| ||||| |||| | ||| | ||| | ||||| Sbjct 19506838 GACCGTGTACGACCAGG------------TGGCCGTGAACGGC---CTGAGCCTGCTGGT 19506794 Query 11686 CGACAACGGCAAGCGGTGGACGGGCACGCTGCTCGACAACGTGACCGAGCCCATCCTCAA 11745 || |||||||| |||||| ||| || || ||| || | |||||||| ||||| || Sbjct 19506793 GAACGACGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAA 19506734 Query 11746 CACGGCGGTCGACGCCAACGGCCGTCCGCTGTTCGTGGAGAGCACCTACACCGAGCAGGT 11805 | ||| ||| ||||| || ||||||||| | ||| |||||| ||| | Sbjct 19506733 CGGCGCGAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAG---GC 19506677 Query 11806 CG-GTGCCA--TCCGTGAGGGCCGCATCCTGGGTCGTCCGACCTACGTCGCTGACAATGT 11862 || | ||| ||||| |||||| ||| | | ||||||||| | || ||| | || Sbjct 19506676 CGCGAGCCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGT 19506617 Query 11863 CGTGAACGGCACGGCCGGCGACCGCGTCGTCGGCATCGTGGGCGACTTCTCGCAGGTCGT 11922 |||| | ||||| | || |||||| || |||| |||||||| ||| || | Sbjct 19506616 CGTGGAGGGCAC----------CACG--GTCGGCTTCATGGGTGACTTCTCCCAGCTCAT 19506569 Query 11923 CTGGGGCCAGATCGGCGGTCTGTCCTTCGACGTGACCGACCAGGCCACCCTCGACTTCGG 11982 |||||||||||||||||||||||||||||||||||| || ||||| ||||| || | || Sbjct 19506568 CTGGGGCCAGATCGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGG 19506509 Query 11983 TGAGGTCCAGGGCGGCGTCTGGGTGCCGAAGCTGATCTCGCTGTGGCAGCACAACATGGT 12042 ||| || || ||||| | |||||||||||||||||||| | || Sbjct 19506508 CACCGTCGAGAGC------------CCGAACTTCGTCTCGCTGTGGCAGCACAACCTCGT 19506461 Query 12043 CGCTGTCCGTTGCGAGGCTGAGTTCGCGTTCATGGTCAACGACAAGGACGCCTTCGTCAA 12102 ||| |||||| ||||||||||| ||||||| ||||||| || || |||||| Sbjct 19506460 CGCAGTCCGTGTCGAGGCTGAGTACGCGTTCCACTGCAACGACGCCGAGGCGTTCGTCGC 19506401 Query 12103 GCTGACCGACAAGGTCGACAGCGACGTTGAGGTCGAGGGCTGAGCCCTACTTGACATCGT 12162 ||||| ||| || | ||||| | | ||||||||||||| |||||||||| Sbjct 19506400 TCTGAC---CAACGTGGTCAGCGGC------GGCGAGGGCTGAGCCTAACTTGACATC-- 19506352 Query 12163 ACACCAGGAGGCCGGGGC-TTCGGCCCCGGTCC---CCTGGTGAACAAGAAAGGACCACA 12218 |||| ||||| ||| | ||| | ||| || ||||| | || ||||| || Sbjct 19506351 -CACCGGGAGG--GGGCCGTTC--ACGCGGCCCCTTCCTGGGGTGTCTGAGAGGACTTCA 19506297 Query 12219 TGAGGATTCGACACAAGGTCAACGGTGG 12246 || |||| | | || ||||||||||| Sbjct 19506296 TGCGGATCCAATCCACCGTCAACGGTGG 19506269 Score = 159 bits (176), Expect = 1e-34 Identities = 384/574 (67%), Gaps = 39/574 (7%) Strand=Plus/Minus Query 10060 AGTCGAAATGGCTGGCCGGAAACAGATCATCCGTGCCGTGGAGAACGATCCACAGTCCGG 10119 ||| || ||||| || || |||||||||| | || || ||||||| ||| ||| Sbjct 19508432 AGTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACCCAGC-TCCTC 19508374 Query 10120 AG-TGGTCAAGGGCTGGGCGCGGGTCGCGACTGGCCGAGAGACCTGTTACTGGTGCCTGA 10178 || | || |||||||||||| ||||||| || || || || || || |||||| |||| Sbjct 19508373 AGATCGTGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCTGA 19508314 Query 10179 TGCTGATCAGCCGAGGACCCGTCTACCTCGGGGCTGACACAGCAGGCTTAGACCTCGAT- 10237 ||||||| ||| || |||| ||||| ||| || | | || | ||||||| Sbjct 19508313 TGCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGACA 19508254 Query 10238 --GACACCACGGCAGCC-----GAA--ATGATCGCTGCCGGT---GAGGATGTCAGCGAG 10285 || ||| || | | ||| | | | || || | | ||| | || |||| Sbjct 19508253 CCGAGACCGTGGTCGACCTCTGGAACGAGGCTGGCCGC-GATCTGGAGAAGTTCCGCGAA 19508195 Query 10286 TA------------CATGCGGCAGTGGCATGACGGGTGCGACTGCAAGGTGGTGCCGGTC 10333 | ||| | ||||||| | |||||||||||| ||||||||| ||| Sbjct 19508194 GAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGTC 19508135 Query 10334 TACGACCGACGCAACTGGCCCGGTTACGACGCATGGAAGCGAGCCGAGCAGTTGTGGATC 10393 | |||| ||||||||||| | | |||| | | || || |||| | |||||| Sbjct 19508134 TTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGATC 19508075 Query 10394 GAGGCCGGTCGAGAGGCCGACCGGCTCATCGAGTCCGGTAAGGCACGCACCACCAACGTG 10453 || || || ||| ||| || |||||| | || || ||||| ||| ||| |||| | Sbjct 19508074 GACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGAG 19508015 Query 10454 AACAAGGAGACGCAGAACGCGCTCCGTCGTCGTCTTG-AGAGAGGCGACATTTCCATGTC 10512 |||||||||||| ||||| |||||||| || |||| | | ||||| | | ||||| Sbjct 19508014 AACAAGGAGACGATCAACGCTCTCCGTCGCCG-CTTGTATCGCGGCGAGTTCGCAATGTC 19507956 Query 10513 CGAGTTCGCTGCCCTCGCAGCGTAATTCACCATCCAAGGCCCCCAGGTGGGGCTGTCACT 10572 ||| | | || ||||| ||||||| | || | ||||||||||| ||| Sbjct 19507955 CGACTAC---GCACTCGCTGCGTAATCCCCC------GAACCCCAGGTGGGTTCATCAAC 19507905 Query 10573 CACGCCCAGGAGGCAAACACCAATGTCTGACACC 10606 || ||||||||||| || || ||||| |||||| Sbjct 19507904 CATGCCCAGGAGGCGAAAACACATGTCCGACACC 19507871 >seq9 Length=46179939 Score = 199 bits (220), Expect = 1e-46 Identities = 515/771 (67%), Gaps = 43/771 (6%) Strand=Plus/Minus Query 42524 GGGCAGGCGTAGCTCACGTCGCAGAACCGGCAGGTGTCCGGGTCGGGTTTCGGATCGAAC 42583 ||||| |||| ||| || ||||| ||| ||||||| || || ||| |||||| Sbjct 16532321 GGGCAACTGTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAAC 16532262 Query 42584 CTCTCGGCCCGGATGTTCTCGTCCAGCTCCTTGAACTTCTCGGTGACCCGCTCTCGGGTC 42643 || ||| ||| || || | | | ||||| |||||||| || || ||| Sbjct 16532261 ATCGAGGCTGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTC 16532202 Query 42644 CACTCGGTCAGGTCGAACGGGTAGGTCGGCTT---------GCCGGTCCTGCCCATCC-- 42692 |||| ||||||||| | || | ||||||||| ||| || | |||| | Sbjct 16532201 CACTTCGTCAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTTGCCCTTCTTCCCCACCATG 16532142 Query 42693 -AGTAGTCACCGGAC---GGGGCGAAGACTCCGTAC-TCGTCCTCCAGCGCGACCTTGTA 42747 ||||||| |||| | || || ||| ||||| || || | | ||||| | ||| Sbjct 16532141 AAGTAGTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCG-CGACCGCGAGCGCGTA 16532083 Query 42748 CACGCCGAGCTGGAAGTCGTCACCGGGCTGGTTGCCGGTCTTGTGGTCTCGGACGTAAAC 42807 |||||||||||||||||||||||| || ||||| |||||||||| ||| ||||| || Sbjct 16532082 CACGCCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAG 16532023 Query 42808 CTCGTCGCCGCAACCGGATCGGAGCACGGCGTCGATGTAGCCTCGGACCAGGACGCCGTC 42867 ||| || || ||| || |||||||||||||| || || ||||||| ||||| Sbjct 16532022 CTCCCCGTCG--ACC----ACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTC 16531969 Query 42868 CAGGTCGATGTCGAACTCAAGCTCGATGCCTGGTGTCCCATCCTCTGCGATCCAGATGAC 42927 || ||||| ||||| | |||||||| |||| || || ||| | | |||||| | Sbjct 16531968 GAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTC 16531909 Query 42928 CTCGTCGCGATGGCTGGTGGCCCAGTTGATGTACTTCTCGACCTGCTCCAGGCCGATGTC 42987 || | | || | || | ||| || | |||||||||||||||||||||||| | Sbjct 16531908 CT-GGCCCGGAGTCTCCCG--CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGT 16531852 Query 42988 ATACCTCCGTGCGATGTCAAGTTGACCGCCGTAACGGCCACTGGCGA--ACCACCACTCG 43045 |||| || ||||||| | |||||| || |||| | | | | | |||||||||| Sbjct 16531851 GTACCGGCGCTCGATGTCTCGCTGACCGTTGT-ACGGAC-CAGACCACGTCCACCACTCG 16531794 Query 43046 AAGTTCGGCGTGATCTCGCACGCCGCGTCGATGTGCTTCTTGTAGGACTCCTTGAAGACT 43105 |||||||| || |||| || | | || || |||| | ||| | Sbjct 16531793 AAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATG 16531734 Query 43106 TCCTGGGCCTCTTCGAGAGAGAGGGAGCGCCCCG-ACCGCTCCCATGCCTCGATGGCTT- 43163 |||| |||||| || || | || | || ||| | ||||||| |||||| || | Sbjct 16531733 TCCTTGGCCTCGTCAAGCGTCAGCG-GCATGCCGTAGGACTCCCATACCTCGACCGCCTC 16531675 Query 43164 --------CGTGAACCGCACTACCCTGCGCTGTCCACGCGGCCGGCCTCTGCCACGCCTT 43215 |||| | |||| | ||||||| ||| || || |||| ||||||| |||| Sbjct 16531674 AGCGACAGCGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTT 16531615 Query 43216 GTCGATGCGGGCCAATTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGA 43265 |||||| || || | ||||| || | |||||| | |||||| |||| Sbjct 16531614 GTCGATCCGAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGA 16531565 Score = 80.6 bits (88), Expect = 8e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 43832 CCATATCATCCTCCCCTCGTCGGTCAGGTCCGTGTAATCGTTGACCCGGATCAACAGGTC 43891 ||| |||||| ||||||||||||| || |||| ||||||||||||||||||||||| Sbjct 16531017 CCAGATCATCTCTCCCTCGTCGGTCAAGTTGGTGTGCTCGTTGACCCGGATCAACAGGTC 16530958 Query 43892 GCCGTCCTC 43900 | ||||||| Sbjct 16530957 GTCGTCCTC 16530949 >seq1 Length=46747018 Score = 127 bits (140), Expect = 6e-25 Identities = 299/433 (69%), Gaps = 29/433 (7%) Strand=Plus/Minus Query 455 CTACCGGCCGACTGGGAGGAGAACTACCGGCAGCCCGTTCTGCGGGCAGCCGGGTACCGG 514 ||||||| ||||||||| ||| ||||||| || || || || ||||||| | | Sbjct 34905277 CTACCGGAGGACTGGGAGCTGAATTACCGGCTCCCGGTCCTTTCTGCTGCCGGGTGGCTG 34905218 Query 515 TGTCAGATTCGCAGACCCGGTTGCCTCGGGAAGGCAACCGATGTGGATCACATCCGCAG- 573 ||| || | | | ||||| ||| || || || ||||| || || |||| | || Sbjct 34905217 TGTGAGGTCGACGGCCCCGGCTGCGTCCGGGCTGCCACCGACGTAGACCACAA--GAAGC 34905160 Query 574 -AGGAGACGATCACCGTCTCAG--CAACCTGCAGGCAGCGTGCAGCCG---CTGCCACGG 627 ||| |||| ||| || | | ||||||||| |||| | |||| ||||||||| Sbjct 34905159 CAGGGAACGACCAC--TCGCGGTCCAACCTGCA---AGCGATCTGCCGTGTCTGCCACGG 34905105 Query 628 GAAGAAGTCATCCGCAGAGGGCCATGCCCGCAAGCGAGAGTTACGAGCCAGGAGGAAGCG 687 ||||||||| |||| |||||| ||||| ||| || | ||| |||||||||| Sbjct 34905104 CAAGAAGTCAGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGGAGGAAGCG 34905045 Query 688 ACCGCCCGAACGCCATCCCGGCTCCCGTTGATTCAGCGGGCCGGGAGCCCGCTTCTCACC 747 ||| ||||||| || || ||| | || |||||||| || ||| ||| |||| Sbjct 34905044 ACCAGAACAACGCCACCCTGG---GCGTCG-TTAAGCGGGCCAGGTGCCTGCT--CCACC 34904991 Query 748 CAGGAGGTGTCAAGTGGGCGAACGAGGCCCAGTTCGGAAGAGGTCG--GATCAGCGCATC 805 ||||||||| | |||||| ||| ||||| |||||| | | || || | ||| | Sbjct 34904990 CAGGAGGTGAC-TGTGGGCACACGCGGCCC-CATCGGAAAACG-CGACGAAGAACGCGTT 34904934 Query 806 CGACGCAACAAGGACGCAGTGCCC-ACCGAGAAGGTGGTCG-CCATCGGGACCGTCGAGG 863 || |||||| | || || ||| ||||| || | ||| |||||||| || ||| Sbjct 34904933 CGTCGCAAC-ACCCCGGAGAACCCGACCGA-AACGATCTCGATGATCGGGACGGTGGAGA 34904876 Query 864 TCCCGGAACTCGG 876 ||||||||||||| Sbjct 34904875 TCCCGGAACTCGG 34904863 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 3888 CGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGGTTCGAGTCCTGC 3947 |||||||||||||||||||| | ||||||||||||||| || | ||||||||| ||||| Sbjct 34903326 CGTAGCTCAATTGGTAGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTGG 34903267 Query 3948 CGCGTCTGCTAC 3959 || || ||| || Sbjct 34903266 CGTGTATGCCAC 34903255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146890399771648