Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_021535.1 Length=50679 Score E Sequences producing significant alignments: (Bits) Value seq18 444 2e-120 seq8 372 1e-98 seq9 313 8e-81 seq1 214 6e-51 >seq18 Length=36757632 Score = 444 bits (492), Expect = 2e-120 Identities = 622/876 (71%), Gaps = 70/876 (8%) Strand=Plus/Plus Query 34194 CATCGACAACCGAACTCGCCGGATGAAGTAGCGCGAGAAGATCGGGTGAATCCCCTCGGA 34253 || ||| ||||| | |||||||||||||| || |||||||||||||| || ||||| Sbjct 22717068 CACCGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACT 22717127 Query 34254 GACACCAGGCATCTTCGCGATGGTCCCTGTGGGGGCCACCGTGCGCTTCTTCACGGGCAC 34313 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct 22717128 GACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCAC 22717187 Query 34314 CGGGATGCGGAGCTGGTGAGCGAACTCCTCAGCGGCCTTGTCGACCTCATGGGCCAAGTG 34373 |||||| || | || || ||||||||| || || ||||||||||| ||||| | Sbjct 22717188 CGGGATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTC 22717247 Query 34374 CCGCAGCACGTCCCGGAATGGACTG--GCCGGG-GCCTCGGAGTACCTCTTGCCGGTCAT 34430 ||||| | | ||| | || ||||| |||| || ||||| ||| |||| Sbjct 22717248 CCGCAAGAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAG 22717307 Query 34431 CGCCAGGAACGAGGCCACACCGAGGTGGCCGACGCCGATCCGGCGGTTCCGGTCCAGCAC 34490 |||| | |||||||| |||||||| || || ||||| || ||||| || ||||| || Sbjct 22717308 GGCCAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAAC 22717367 Query 34491 CTCCCTCGACTTCGGGTCCGCGACCTCCGAGAAGGTCGCCCGGATCAGGAATCGGGTGAT 34550 ||| | |||||| || |||||| | ||||| ||||||||||||||||| || || || Sbjct 22717368 CTCTCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCAT 22717427 Query 34551 CAGCCTGTGCGCCTTGTACAGCCCGAGGTAGTCCACCTTGTTGGTGTCCTCCCGGACGAA 34610 ||| | ||| || | ||| ||| |||||| ||| || | || |||||| Sbjct 22717428 CAGACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGG---CGTCGGTGACGAA 22717484 Query 34611 CGCGGCCAGGTTGACGTGGCCCAGGTTGCAGGGCTCCCACGGTTCGAGGGTGATCTCGCC 34670 ||| || ||||||| ||| || |||||||||||||||||||| || || |||||||| || Sbjct 22717485 CGCCGCGAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCC 22717544 Query 34671 ACACGGGTTGGTGCAGACGACCTCGTTGGGCTCCCCGACGTTCGACAGCGACGAATCCCA 34730 |||||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct 22717545 GCACGGGTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCA 22717604 Query 34731 GAAGCCAGGCTCGCCGTTGGCGACCATGCCCTCGGTGA---TCTT--GCGGAGGATGTAC 34785 | || |||||||||||| || ||||||| || ||| || | ||| | Sbjct 22717605 CATCCCCGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGC 22717664 Query 34786 --TC--------CGCGTT------GCCGCCACCGACCTTCACCGCATCCCAGAAGTCCTG 34829 || || ||| | || || |||| || |||||| | | Sbjct 22717665 CTTCGTGGAGCGCGGGTTGAGCGGGTCGACAGGAGCCTTGGCCAGGCTCCAGAACGCATC 22717724 Query 34830 GTCGACCTCCACCGAGATGTTCGTCGTCCAGTGCGACCCGGTGTCGGCCTTGATCCCGAC 34889 ||| ||||| |||||||||||||| |||||||| || ||| |||| |||||| | Sbjct 22717725 GTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGT 22717784 Query 34890 GAAC-----------------CGGTC------GAT------------------CTGCGGG 34908 |||| | ||| ||| |||| | Sbjct 22717785 GAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCTGCCAG 22717844 Query 34909 TCGTTCCAGTGCATCATCGCCATGCGAGCCGAGCGGCGAACGCCGCCAGCGACCACACAC 34968 || ||||||||||||||||||||||||||| |||||||| || || || ||||||||| Sbjct 22717845 TCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCACACAC 22717904 Query 34969 TGCGCGATGGCGTGGTCGATCCCCATCGC--CGAGA 35002 ||||||||||||||||||||| ||||||| ||||| Sbjct 22717905 TGCGCGATGGCGTGGTCGATCTCCATCGCATCGAGA 22717940 Score = 378 bits (418), Expect = 2e-100 Identities = 317/388 (82%), Gaps = 3/388 (1%) Strand=Plus/Plus Query 48431 GAGAAGAGCACCGACTTGCGTCCGTTGATGCAGAGCCCGCAGCGAGCGCATGCTGAACCC 48490 ||||| || || |||||||||||||||||| || ||||| | |||||| || || ||| Sbjct 22719949 GAGAACAGAACGCTCTTGCGTCCGTTGATGCACAGACCGCACCTAGCGCAGGCCGATCCC 22720008 Query 48491 TTGTCGCTGATCAGCTCGATGGCTTTGTTGTTC---TCCGGGCACCGCGTGGCGTTGGGG 48547 ||| || ||||||| |||| | || ||||||| |||||||| ||| ||| | ||| Sbjct 22720009 TTGGCGTTGATCAGGTCGAAGTCTCGGTTGTTCAGCTCCGGGCAGCGCACGGCCGTCGGG 22720068 Query 48548 AACTGCGCCTTGCCTTCTGCGAAGGTCTGGTCGACGTAGGCGATGTTGATGCCCTTGCCT 48607 ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 22720069 AACTGTGCCTTGCCTTCGGCGAACGTCGTGTCGACGTAGGCGATGTTGATGCCCTTGCCT 22720128 Query 48608 TCGAGGAACCGTGCGACCTCGATGTTGTCTCGATCCGCGCTGAAGTAGAGCGCGAGGTTC 48667 || |||||||| || || || | |||||| |||||||||||||||| |||| |||||| Sbjct 22720129 TCCAGGAACCGGGCCACGTCTACGTTGTCGGGATCCGCGCTGAAGTACAGCGACAGGTTC 22720188 Query 48668 GACAGCTTCTGCGCGTGGAGGAACACGGCAGCGGTCTGAACCCTTGTGTATGCCCAGAAC 48727 ||||||||||| | ||| ||| | || || |||||||||||||| ||||| ||||||||| Sbjct 22720189 GACAGCTTCTGTGAGTGCAGGTAGACCGCTGCGGTCTGAACCCTGGTGTAGGCCCAGAAC 22720248 Query 48728 TGCACGTCCGGGTTGTCGGCGATGACTTTCGCCCAGGCGGTGACGTACGTCGGGCTGAAG 48787 |||||||| | ||| |||||| |||||| || | |||||| |||||||||||| Sbjct 22720249 TGCACGTCGCTGAAGTCTCGGATGACACGCGCCCACGCTGCGACGTAGGTCGGGCTGAAG 22720308 Query 48788 AAGTCTCCGTCCCAGTGGATGCGGAACA 48815 ||||| || ||||||||||| ||||||| Sbjct 22720309 AAGTCGCCATCCCAGTGGATACGGAACA 22720336 Score = 313 bits (346), Expect = 8e-81 Identities = 538/767 (70%), Gaps = 22/767 (3%) Strand=Plus/Plus Query 43089 GTAGCTCACGTCGCAAAAAGCGCACTTGTCCGGCTCTGGGTCCGGGTCAAAGCGCTCGGC 43148 |||| ||| || || || ||| |||||||| || || |||||| || | ||| Sbjct 22718031 GTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAACATCGAGGC 22718090 Query 43149 GGCGATGTTCTCTTCCAGTTCGCGGAACTTCTCCGCGACCCTCTCGCGGGGCCACTCCCC 43208 ||||| || || | | |||||| ||| | || || || | ||||| | Sbjct 22718091 TGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGT 22718150 Query 43209 CAAGTCGTAGGGGTACGTCGGCTTGC---CCTTCACGCCTTTCTTCCCGGCCATGTAGTA 43265 || ||||||||| | |||||||| |||| ||| |||||||| ||||| |||| Sbjct 22718151 CAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTT---GCCCTTCTTCCCCACCATGAAGTA 22718207 Query 43266 GTCCCCGATCTGCGGGGGCTCGATGCCGTAGGTCTCGGCCAGGGCAA-CGCTGTAGACGC 43324 ||| ||| ||| ||| | ||||| ||||||||| || | || | ||| ||| |||| Sbjct 22718208 GTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCGC-GTACACGC 22718266 Query 43325 CAAGCTGGAAGTCGTCACCGGGGGTGTTGCCGGTCTTGTAGTCCCGGACGATCACGTTGC 43384 | ||||||||||||||||| || ||| |||||||||||||||||||| | | | Sbjct 22718267 CGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCC 22718326 Query 43385 CGTCGCTGTCCCTCAGCACGGCGTCGATGTAGCCCCGAACCAAGACTCCGTCGAGGTCGA 43444 |||| | || | |||||||||||||| || ||||||| || |||||||| |||| Sbjct 22718327 CGTC---GACCACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTCGAGCTCGA 22718383 Query 43445 TGTCGAAGCCCAGCTCGATGCCTGGGGTGCCGTCAGGGGCGATCCAGATGACCTCTTCGG 43504 | |||||| ||||||||| |||| || ||||| |||| | |||||| ||| | | Sbjct 22718384 TCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTCCTGGCCCG 22718443 Query 43505 GGTGGCCTTCGGTCCAGGCGAAGAACTTCTCGATCTGTTCGAGCCCGATGTGCCAACGGC 43564 | | || | | ||| |||||||||||||||| ||| || || |||| | | |||| Sbjct 22718444 G--AGTCTCCCG-CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGTGTACCGGC 22718500 Query 43565 GTTCGAGATCGCTCGCGCCGTCGTAGCGGCCCGACCGGAACCACCAGTCGAAGTTCGGGG 43624 | |||| || | | |||| ||| | || |||| |||||| ||||||||||||| Sbjct 22718501 GCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACTCGAAGTTCGGGG 22718560 Query 43625 TCACGTCGGTGTACTGCGAC-ACCTCTTTGGCGTACTCCTCCTTGAACATCTCCTGGGCC 43683 || | |||||| | || | || || |||||||| | | |||||| |||| |||| Sbjct 22718561 TCTCCTCGGTG-AAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATGTCCTTGGCC 22718619 Query 43684 TCTTCAAGGCTCATCGGATCACCGTCGAGTTCCC--GCCTGCGGTACTCCTCCAAGACGG 43741 || ||||| ||| ||| |||| | |||| ||| | | |||| ||| | Sbjct 22718620 TCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCT--CGACCGCCTCAGCGACAG 22718677 Query 43742 TGTGGACTGCGCTCCCCTGCGGGAGCCAGGCGGCTGGCCTCTGCCATACCTTGTCGACGC 43801 ||||| || |||||||||| |||||||| ||||||| |||||| |||||||||| | Sbjct 22718678 CGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTTGTCGATCC 22718737 Query 43802 GGGCCAGCTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGAGCTG 43847 | || |||||||| || | |||||| | |||||| |||| ||| Sbjct 22718738 GAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGATCTG 22718783 >seq8 Length=24646021 Score = 372 bits (412), Expect = 1e-98 Identities = 637/922 (69%), Gaps = 54/922 (6%) Strand=Plus/Minus Query 11661 GGCCTTCCTGACTCCCGAGCAGAGCCAGGACTACTTCGCGGAGATCGAGAAGACCTCGAT 11720 || || |||| ||||||||| |||| |||||||| ||| ||||||||||||||| Sbjct 19507252 GGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACCTCGAT 19507193 Query 11721 TGTCCAGCGGATCGCCCGCAAGGTCCCGATGGGTCCGACCGGCATCAGCATCCCCCACTG 11780 ||||||| | |||||| ||||| ||||||||| | || ||| | ||||| ||||| Sbjct 19507192 CGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCGCACTG 19507133 Query 11781 GACCGGTGCCGTCTCGGCGTCGTGGACCGGCGAGGCCGAGCGCAAGCCGATCACCAAGGG 11840 | ||| | ||| || ||||| ||| |||| || ||||| ||||||||||| Sbjct 19507132 GGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACCAAGGG 19507073 Query 11841 TTCGTTCGGCAAGCAGGAACTGGAGCCGGTGAAGATCACCACGATCTTCGCAGAGAGCGC 11900 | |||| | | ||| |||||| | |||||||||| | | || Sbjct 19507072 CAACATGACTTCGCAGACCATCGCGCCCCACAAGATCGCGACGATCTTCGTGGCGTCTGC 19507013 Query 11901 TGAAGTCGTGCGTCTCAACCCGCTCAACTACCTGAACACCATGCGGACCAAGATCGCCGA 11960 || ||| ||| |||||| |||||||||| |||||||| |||||| | || Sbjct 19507012 GGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTGGCGAC 19506953 Query 11961 GGCCATCGCGCTCAAGTTCGACGCGGCTGCCATCCACGGCATCGACAAGCCGTCTGCGTT 12020 ||| ||||| | |||||||| || || || ||||||| ||||| ||| |||| Sbjct 19506952 CGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGACA-GCC-----CGTT 19506899 Query 12021 CAAGGGCTACCTGGCCGAGACGACCAAGGTCGTGTCGCTGGCCGACACCAACCTGACCAC 12080 | | |||| | | |||| ||||||| | | ||| | || ||||||| | |||| Sbjct 19506898 CCCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACCACCGGTGCCAC 19506839 Query 12081 GGCGTCGGGTCCGCAGGGCAACGCCTACCTGGCGGTCAACAACGCCCTGTCGCTCCTGGT 12140 | | || || || ||| || || | |||| |||| || ||||| Sbjct 19506838 GAC--CGTGTACG-------------ACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGT 19506794 Query 12141 GAACAGCGGCAAGAAGTGGACCGGCACCCTGCTGGACAACGTCACCGAGCCGATCCTCAA 12200 |||| |||||||||||||||| |||||| |||||| || |||||||||||||||| || Sbjct 19506793 GAACGACGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAA 19506734 Query 12201 CACGGCGGTCGACGGCAACGGTCGTCCTCTGTTCGTGGAGTCGACCTACACCGACCAGGT 12260 | ||| ||| |||||||| || |||||| | |||||||||||| || || Sbjct 19506733 CGGCGCGAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGA---GGC 19506677 Query 12261 CG---GCGCGATCCGTGAGGGCCGCATCCTGGGTCGTCCCACCTACGTCGCGGACAACGT 12317 || || || ||||| |||||| ||| | | ||||| ||| | || ||| |||| Sbjct 19506676 CGCGAGCCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGT 19506617 Query 12318 GGTCAACGGCACCGTTGGCAACCGCGTGGTCGGCGTCATGGGCGACTTCAGCCAGGTCAT 12377 || | |||||| || ||||||| ||||||| |||||| |||| |||| Sbjct 19506616 CGTGGAGGGCACC-------AC-----GGTCGGCTTCATGGGTGACTTCTCCCAGCTCAT 19506569 Query 12378 CTGGGGCCAGATCGGCGGTCTGTCCTTCGACGTGACCGACCAGGCCACCCTGGACTTCGG 12437 |||||||||||||||||||||||||||||||||||| || ||||| |||||| || Sbjct 19506568 CTGGGGCCAGATCGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAAC----- 19506514 Query 12438 TGAGGAACAGGGCGGCGTGTGGGTGCCC-AAGCTGATCTCGCTGTGGCAGCACAACATGG 12496 | |||| ||| | | |||| || | |||||||||||||||||||| | | Sbjct 19506513 -------CTGGGCACCGT-CGAGAGCCCGAACTTCGTCTCGCTGTGGCAGCACAACCTCG 19506462 Query 12497 TCGCTGTCCGTTGCGAAGCTGAGTTCGCGTTCATGGTCAACGACAAGGACGCGTTCGTGA 12556 |||| |||||| ||| ||||||| ||||||| ||||||| || |||||||| Sbjct 19506461 TCGCAGTCCGTGTCGAGGCTGAGTACGCGTTCCACTGCAACGACGCCGAGGCGTTCGTCG 19506402 Query 12557 AGCTGACCGACCAGGTC-GCGG 12577 |||||| || |||| |||| Sbjct 19506401 CTCTGACCAACGTGGTCAGCGG 19506380 Score = 316 bits (350), Expect = 7e-82 Identities = 529/756 (70%), Gaps = 39/756 (5%) Strand=Plus/Minus Query 10354 CGGACCTTCTACGACGCTCAACGCGCACTCCACCACCCGGAGCTGGACCCCAACGAGAGG 10413 ||||| ||||||||| | || ||| |||||||||||||||||| || |||||||||| Sbjct 19508613 CGGAC-TTCTACGACTCCCAGCGCAGACTCCACCACCCGGAGCTTCCCCGCAACGAGAGG 19508555 Query 10414 TTGCTGTCCGAGCTTCGGTTCGAGTGGTTCGTGCAGAACATGGAGCCCGCACGCGTCAAG 10473 |||| | ||| || | || ||||||||||| |||||||||||||||||| | Sbjct 19508554 TTGCGGAGCGACCTCCAGTGGGAGTGGTTCGTCAGGAACATGGAGCCCGCACGAAAGGGG 19508495 Query 10474 TTCTCCCAGGAGGAGGCCGGTGACGCAGGCGTGGCCCAGGTCGCGCTA-CGAGCAGTGCG 10532 || || |||| || | | | || | || || || | | | ||| ||||||| Sbjct 19508494 TTGTCGCAGGCCGACTCTCCTCAAGCTGCGGTCACCAAGCTGACCTTGGCGA-CAGTGCG 19508436 Query 10533 CGAAGTCGAGATGGCAGGACGCCGACAGATCATCGGGGCGGTCAAAGACGACCCCGCTCC 10592 |||||| ||||||||||| ||||||||||||||||| || ||||| ||||||| ||||| Sbjct 19508435 CGAAGTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACCCAGCTCC 19508376 Query 10593 CCGCATCATTCGCGGGTGGGCGCGAGTGGCCACTGGTCGAGAGACCTGTGCCTGGTGCCT 10652 | ||| | || |||||| | || ||||| || || || || || |||||||| || Sbjct 19508375 TCAGATCGTGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCT 19508316 Query 10653 GATGCTCATCTCCCGAGGGCCTGTGTACCTCGGGGCCACCAACGCCGGCCTAGACCTCGA 10712 |||||| || ||||| || || | |||||| ||| | || || || ||||||| Sbjct 19508315 GATGCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGA 19508256 Query 10713 TGACGACTCGGCAGCCGAGAT---GATCGCTGCCGGT---------GAGGATGTCAGCGA 10760 ||| | | | ||| | || || || || ||| | || |||| Sbjct 19508255 CACCGAGACCGTGGTCGACCTCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTCCGCGA 19508196 Query 10761 GTA------------CATGGAGCAGTGGCACGCCGGGTGCGACTGCAAAGTGGTGCCGGT 10808 | ||| ||| |||||||||| |||||||||||| |||||||| || Sbjct 19508195 AGAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGT 19508136 Query 10809 CTTCAAGGTGGACGACTGGCCCGGTTTGGAAGCCCAGAAGCGGGCTCTCCGGTTGTGGAT 10868 |||| | ||||| |||||||||| || || ||| | || ||||| | | | ||||| Sbjct 19508135 CTTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGAT 19508076 Query 10869 CGACGCAGGGCGCGAAGCGTCCCGGTTGATCGAGTCGGGCAAGGCCCGGACCAACAACAT 10928 |||||| ||| ||||| || | | || | || ||||||||||| |||| ||| Sbjct 19508075 CGACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGA 19508016 Query 10929 GAACAAGGAGACGCAGAACGCGCTCCGTCGTCGCCTCGAACGGGGCGAAGTTCGC-ATGT 10987 ||||||||||||| ||||| |||||||| ||| | | || |||| ||||||| |||| Sbjct 19508015 GAACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCG-AGTTCGCAATGT 19507957 Query 10988 CCGAATTCGCTGCTGCTGCAGCGTAGTTCATCCCATCCAAGCCCCCAGGTGGGGCTGTCA 11047 |||| | ||| || || ||||| ||||| || | ||||||||||| ||| Sbjct 19507956 CCGACTACGC-ACT--CGCTGCGTA----ATCCC--CCGA-ACCCCAGGTGGGTTCATCA 19507907 Query 11048 CCTATGCCCAGGAGGCAATCCAACATGTCCGATACC 11083 | ||||||||||||| | |||||||||| ||| Sbjct 19507906 ACCATGCCCAGGAGGCGAAAACACATGTCCGACACC 19507871 Score = 111 bits (122), Expect = 5e-20 Identities = 200/288 (69%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 12956 GTCGAGCGGATGATCAAGCGGCGCATCCCGGACCTGGCCACCAAGGTCACCGACCCGGAC 13015 |||||||| |||||| ||| || ||||| || |||| | ||| ||| | ||||| Sbjct 19506045 GTCGAGCGCATGATCCGGCGTCGGATCCCAGATCTGGACGCCAGGGTGTCTT---CGGAC 19505989 Query 13016 TACCTC---GAAGACCTCAAGCAGGTCGAAGCAGATGCCGTTCTGCGGCTTGTCCGTAAC 13072 | || | || || | | |||| || || || || ||||| || || |||||| Sbjct 19505988 ATCTTCCGGGCCGATCTGATCGACATCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAAC 19505929 Query 13073 CCCGAGGGCTACCTGTCGGAGACCGACGGCAACTACACGTACATGCTCCGGTCTGACCTC 13132 || ||||||||||| |||||||||||||| ||||| ||| ||||| | |||| || Sbjct 19505928 CCGGAGGGCTACCTCTCGGAGACCGACGGGGCGTACACCTACCAGCTCCAGGCTGATCTG 19505869 Query 13133 GC-CAGCGGGAAGCTGGAGATCTTCCCCGAGGAGTGGGAGATCCTGGG---CTACCGCAG 13188 | ||| || ||||| | ||| | ||| |||||| || | |||| | |||| Sbjct 19505868 TCTCAG-GGCAAGCTCGTCATCCTTGGCGAAGAGTGGACGACCTTGGGAGTCAACCGACT 19505810 Query 13189 ATCTCGCATGACGGTGATCGTTCCGAATCCGGTGATGCCGACATGAGC 13236 || |||||| | ||||| ||||| ||||||||||||||||| Sbjct 19505809 CTCGCGCATGTCCACCATCGTCCCGAACATCGTGATGCCGACATGAGC 19505762 Score = 80.6 bits (88), Expect = 9e-11 Identities = 117/166 (70%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 13361 GATGAGCCTTCTCGACGGCGGTCCCGCCTACGAGGACGTGATCGTCTACCCCGAAGAGGT 13420 ||||||||| ||||| ||| || ||| || ||| ||||||||||||||||| | Sbjct 19505574 GATGAGCCTCCTCGATACCGGAGCCCGGTACCAGCCGGTGCTCGTCTACCCCGAAGAGCT 19505515 Query 13421 CGTCACNNNNNNNNNNGGCAACACCCAGACCCGCCCATCCAAGACCGGCATCCCGGCCAA 13480 |||| || |||| |||||| || || |||||| |||| || | Sbjct 19505514 GGTCATCGACGCGGACGGGAACAAGAAGACCCAGCCGTCGAAGACCCCGATCCAAGCGAT 19505455 Query 13481 GGCGCGGTTCCAGGT-GCAAGGCCAGTCCGGTACGTCGGCACGACG 13525 || || |||||||| || | |||||||||||||||||||||||| Sbjct 19505454 CGCACGCTTCCAGGTCGCCAA-CCAGTCCGGTACGTCGGCACGACG 19505410 >seq9 Length=46179939 Score = 313 bits (346), Expect = 8e-81 Identities = 538/767 (70%), Gaps = 22/767 (3%) Strand=Plus/Minus Query 43089 GTAGCTCACGTCGCAAAAAGCGCACTTGTCCGGCTCTGGGTCCGGGTCAAAGCGCTCGGC 43148 |||| ||| || || || ||| |||||||| || || |||||| || | ||| Sbjct 16532313 GTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAACATCGAGGC 16532254 Query 43149 GGCGATGTTCTCTTCCAGTTCGCGGAACTTCTCCGCGACCCTCTCGCGGGGCCACTCCCC 43208 ||||| || || | | |||||| ||| | || || || | ||||| | Sbjct 16532253 TGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGT 16532194 Query 43209 CAAGTCGTAGGGGTACGTCGGCTTGC---CCTTCACGCCTTTCTTCCCGGCCATGTAGTA 43265 || ||||||||| | |||||||| |||| ||| |||||||| ||||| |||| Sbjct 16532193 CAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTT---GCCCTTCTTCCCCACCATGAAGTA 16532137 Query 43266 GTCCCCGATCTGCGGGGGCTCGATGCCGTAGGTCTCGGCCAGGGCAA-CGCTGTAGACGC 43324 ||| ||| ||| ||| | ||||| ||||||||| || | || | ||| ||| |||| Sbjct 16532136 GTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCGC-GTACACGC 16532078 Query 43325 CAAGCTGGAAGTCGTCACCGGGGGTGTTGCCGGTCTTGTAGTCCCGGACGATCACGTTGC 43384 | ||||||||||||||||| || ||| |||||||||||||||||||| | | | Sbjct 16532077 CGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCC 16532018 Query 43385 CGTCGCTGTCCCTCAGCACGGCGTCGATGTAGCCCCGAACCAAGACTCCGTCGAGGTCGA 43444 |||| | || | |||||||||||||| || ||||||| || |||||||| |||| Sbjct 16532017 CGTC---GACCACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTCGAGCTCGA 16531961 Query 43445 TGTCGAAGCCCAGCTCGATGCCTGGGGTGCCGTCAGGGGCGATCCAGATGACCTCTTCGG 43504 | |||||| ||||||||| |||| || ||||| |||| | |||||| ||| | | Sbjct 16531960 TCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTCCTGGCCCG 16531901 Query 43505 GGTGGCCTTCGGTCCAGGCGAAGAACTTCTCGATCTGTTCGAGCCCGATGTGCCAACGGC 43564 | | || | | ||| |||||||||||||||| ||| || || |||| | | |||| Sbjct 16531900 G--AGTCTCCCG-CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGTGTACCGGC 16531844 Query 43565 GTTCGAGATCGCTCGCGCCGTCGTAGCGGCCCGACCGGAACCACCAGTCGAAGTTCGGGG 43624 | |||| || | | |||| ||| | || |||| |||||| ||||||||||||| Sbjct 16531843 GCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACTCGAAGTTCGGGG 16531784 Query 43625 TCACGTCGGTGTACTGCGAC-ACCTCTTTGGCGTACTCCTCCTTGAACATCTCCTGGGCC 43683 || | |||||| | || | || || |||||||| | | |||||| |||| |||| Sbjct 16531783 TCTCCTCGGTG-AAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATGTCCTTGGCC 16531725 Query 43684 TCTTCAAGGCTCATCGGATCACCGTCGAGTTCCC--GCCTGCGGTACTCCTCCAAGACGG 43741 || ||||| ||| ||| |||| | |||| ||| | | |||| ||| | Sbjct 16531724 TCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCT--CGACCGCCTCAGCGACAG 16531667 Query 43742 TGTGGACTGCGCTCCCCTGCGGGAGCCAGGCGGCTGGCCTCTGCCATACCTTGTCGACGC 43801 ||||| || |||||||||| |||||||| ||||||| |||||| |||||||||| | Sbjct 16531666 CGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTTGTCGATCC 16531607 Query 43802 GGGCCAGCTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGAGCTG 43847 | || |||||||| || | |||||| | |||||| |||| ||| Sbjct 16531606 GAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGATCTG 16531561 Score = 259 bits (286), Expect = 2e-64 Identities = 219/269 (81%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 48431 GAGAAGAGCACCGACTTGCGTCCGTTGATGCAGAGCCCGCAGCGAGCGCATGCTGAACCC 48490 ||||| || || |||||||||||||||||| || ||||| | |||||| || || ||| Sbjct 16530395 GAGAACAGAACGCTCTTGCGTCCGTTGATGCACAGACCGCACCTAGCGCAGGCCGATCCC 16530336 Query 48491 TTGTCGCTGATCAGCTCGATGGCTTTGTTGTTC---TCCGGGCACCGCGTGGCGTTGGGG 48547 ||| || ||||||| |||| | || ||||||| |||||||| ||| ||| | ||| Sbjct 16530335 TTGGCGTTGATCAGGTCGAAGTCTCGGTTGTTCAGCTCCGGGCAGCGCACGGCCGTCGGG 16530276 Query 48548 AACTGCGCCTTGCCTTCTGCGAAGGTCTGGTCGACGTAGGCGATGTTGATGCCCTTGCCT 48607 ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 16530275 AACTGTGCCTTGCCTTCGGCGAACGTCGTGTCGACGTAGGCGATGTTGATGCCCTTGCCT 16530216 Query 48608 TCGAGGAACCGTGCGACCTCGATGTTGTCTCGATCCGCGCTGAAGTAGAGCGCGAGGTTC 48667 || |||||||| || || || | |||||| |||||||||||||||| |||| |||||| Sbjct 16530215 TCCAGGAACCGGGCCACGTCTACGTTGTCGGGATCCGCGCTGAAGTACAGCGACAGGTTC 16530156 Query 48668 GACAGCTTCTGCGCGTGGAGGAACACGGC 48696 ||||||||||| | ||| ||| | || || Sbjct 16530155 GACAGCTTCTGTGAGTGCAGGTAGACCGC 16530127 >seq1 Length=46747018 Score = 214 bits (236), Expect = 6e-51 Identities = 179/213 (84%), Gaps = 10/213 (5%) Strand=Plus/Minus Query 3900 CCATTGACGTGTAGCTCAATCGGCAGAGCACCCGGCTGTTAACCGGGCGGTTGAAGGTTC 3959 ||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| Sbjct 34903450 CCACTGACGTGTAGCTCAAT-GGCAGAGCATCCGGCTGTTAACCGGACGGTTGAAGGTTC 34903392 Query 3960 GAGTCCTTCCATGTCAGCCATGCGAGCGG--CCCCTGCCCAAAGGGAGGAGCCCTCGCAC 4017 |||||||||| |||||||| ||| |||| |||| | | | | ||||||| ||||| Sbjct 34903391 GAGTCCTTCCTCGTCAGCCAAGCGGGCGGTTCCCCAG---AGCGTGGGGAGCCCCCGCAC 34903335 Query 4018 ATAG-GCACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTC 4076 || ||||||||||||||||| ||||||| |||||||||||||||||| | ||||||| Sbjct 34903334 CAAGTACACGTAGCTCAATTGGT-AGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTC 34903276 Query 4077 GAGTCCTGCCGTGTCTGCACCCACCCAGTTCCC 4109 || ||||| ||||| ||| |||||| ||||| Sbjct 34903275 GACTCCTGGCGTGTATGCCACCACCC--TTCCC 34903245 Score = 150 bits (166), Expect = 6e-32 Identities = 224/310 (72%), Gaps = 7/310 (2%) Strand=Plus/Minus Query 604 GCGGGCTGGATCTGTGAGATCGGTTGGTCCGGTTGCCTGCTTGAGGCGACCGAGGTCGAC 663 || || ||| | |||||| ||| | |||| ||| | | | || ||||| || ||| Sbjct 34905229 GCCGGGTGGCTGTGTGAGGTCGACGGCCCCGGCTGCGTCCGGGCTGCCACCGACGTAGAC 34905170 Query 664 CACATCCGTCGTGGTGACGACCATTCGCGCGCCAACCTACGAGCCGCGTGCTC-GTCGTG 722 |||| | || ||||||| ||||| ||||||| | ||| ||| ||| || Sbjct 34905169 CACAAGAAGCCAGGGAACGACCACTCGCGGTCCAACCTGCAAGCGATCTGCCGTGTC-TG 34905111 Query 723 CCACGGCAAGAAGTCATCCGCTGAGGGCAACGCCCGGAAGCGGCAGTTACGAGCCAGGAG 782 |||||||||||||||| ||||||||||| ||||| |||| | | ||| |||| Sbjct 34905110 CCACGGCAAGAAGTCAGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGGAG 34905051 Query 783 GAAGCGACC-GACCGAACGCCACCCTGGCCG-CATATAGCGGGCCAGGAGCCCGCTGACC 840 ||||||||| || | ||||||||||||| || | | ||||||||||| ||| ||| || Sbjct 34905050 GAAGCGACCAGAAC-AACGCCACCCTGGGCGTCGTTAAGCGGGCCAGGTGCCTGCT--CC 34904994 Query 841 ACCCAGGAGGTGACAGTGGGCGAACGAGGCCCTGTGCGTAAACGGTCGGATCAACGCGTC 900 |||||||||||||| |||||| ||| ||||| | | ||||| || ||||||| Sbjct 34904993 ACCCAGGAGGTGACTGTGGGCACACGCGGCCCCATCGGAAAACGCGACGAAGAACGCGTT 34904934 Query 901 CGACGCAACA 910 || ||||||| Sbjct 34904933 CGTCGCAACA 34904924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162048552083392