Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_022086.1 Length=50690 Score E Sequences producing significant alignments: (Bits) Value seq1 632 7e-177 seq18 529 6e-146 seq8 383 5e-102 >seq1 Length=46747018 Score = 632 bits (700), Expect = 7e-177 Identities = 1021/1440 (71%), Gaps = 70/1440 (5%) Strand=Plus/Minus Query 736 TGCCACGGGAAAAAGTCATCCGCTGAGGGGAACGCCCGAAAGCGGGAATTGCGAGCCAGG 795 |||||||| || |||||| |||||||||| |||||| ||||||| | ||| || Sbjct 34905112 TGCCACGGCAAGAAGTCAGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGG 34905053 Query 796 AGGAAGCGCCCACAGGACAGACATCCCGGCTCTTTGT--AGCGG-CCAGGTGCACGCTAG 852 |||||||| ||| | | | || || || | | || ||||| |||||||| ||| Sbjct 34905052 AGGAAGCGACCAGAACAACGCCACCCTGGG-CGTCGTTAAGCGGGCCAGGTGCCTGCTCC 34904994 Query 853 ATACCCAGGAGGTAACCACAGTGGGAGCTGCAACACGCGGCCCGGTCCCTGAGAG-GACA 911 | |||||||||| || ||||| ||||||||||| || | | ||| Sbjct 34904993 A--CCCAGGAGGTGACT---GTGGGC------ACACGCGGCCCCATCGGAAAACGCGAC- 34904946 Query 912 GACCAGACCGTTCGCCACAGC------GAG---CCGGTCGACAAGATCGAGGTCTTCGGC 962 || | |||||| | || | ||| ||| ||| | |||| | | |||| Sbjct 34904945 GAAGAACGCGTTCGTCGCAACACCCCGGAGAACCCGACCGAAACGATCTCGATGATCGGG 34904886 Query 963 GAAGTGAGAG-TGCCTGACCTCGGAGACGTGAGTTTCCGTGGTGAGACACACCCGATCAT 1021 ||| ||| | || || ||||| ||| |||| | | || ||||| || ||| |||| Sbjct 34904885 ACGGTG-GAGATCCCGGAACTCGGCGACATGAGCTACATGGGCGAGACCCATCCGCTCAT 34904827 Query 1022 CAAGGACCTGTACCAGGCGATGCAGGAATCCGGCCAGAGCCG----GTTCTACGAGCCGT 1077 | | || ||||| | ||||| || |||| ||| ||||| ||||||||| ||| Sbjct 34904826 CGAAGAGATGTACGACGCGATCAAGCAATC-GGC---AGCCGTGAAGTTCTACGAACCGA 34904771 Query 1078 CTGACTGGCAGGTCGCACGCCTCACACTCCTCGCGCTGAACGAGGAGCTCGTCGCAGCCA 1137 | ||||||||| |||| |||||| | ||| | | |||||| | || ||| |||| |||| Sbjct 34904770 CCGACTGGCAGTTCGCTCGCCTCGCTCTCTACACACTGAACCAAGAACTCATCGCGGCCA 34904711 Query 1138 GGCACGGAGACAAGCCGATTGGCGCGATGAAGCTCACGGCACTGAACCAGATGCTCACGA 1197 |||| | |||||| || || ||||||||||| || || | |||||||||||| | Sbjct 34904710 AGCACCAGGGCAAGCCCATCGGTGCGATGAAGCTGACCGCGATCAACCAGATGCTCTCCG 34904651 Query 1198 CGCTCATGCTGACCGAAGGCGACCGCCGCCGCGTCCGCATCGAGCTCGAACGGAAGC-CC 1256 | || ||||||||||||||||||| || || |||||| | ||| |||| || ||| || Sbjct 34904650 CACTGCTGCTGACCGAAGGCGACCGGCGACGGGTCCGCCTGGAGATCGAGCG--AGCACC 34904593 Query 1257 AGCCAGCCTGAAGGCGTCGTCATCGACGCTCGCGAGTCCTTCAAGAAGTGGCTGGAAGAA 1316 ||| || || || || | | || | || | || || ||| || ||| | Sbjct 34904592 CGCCGACCCGAC--CGGCGGGAAGGTCGTTGACGTGACC-----GACGTG-CTC-AAGCA 34904542 Query 1317 CCGTGATCCCCCGGTCCCCCGAGGCGGGTTAGGCGTTTCCCTC-CTCCTTTCCCGCCGAG 1375 || || || | | || |||| | | || |||| | ||| || Sbjct 34904541 GCGCCTCGCCAAGGCGAGCGGCGGGGGGTGATG-GTCCCCCTGGCGGGGTTCTGAGCGGT 34904483 Query 1376 AGCCCTGCTACCG---GCTCCCCGTCTCGGGGTTGACC----GATCT-GAAAGGAACCAC 1427 ||| ||||||| ||||||| | |||||||||| || || ||||||| || | Sbjct 34904482 TGCC--GCTACCGACTGCTCCCCCGCCGGGGGTTGACCCTCCGAACTTGAAAGGATCCGC 34904425 Query 1428 ATGGCAGTAATCGGTATCGAGCTCGAACCGGATCAGCTCGTCCT---CACCCGTCGTCGC 1484 ||||| | |||| | | | |||| | ||| |||| ||| |||| | || | Sbjct 34904424 ATGGCCGACCTCGGCAACCCGTTCGACCTGGAGATGCTCTGCCTGGTCACCGGCCG---C 34904368 Query 1485 GACTTCAAGTGGACGTTCGAGAATCTAGACGACGACGGCAACC---CTACCAACTTCCCC 1541 |||||| ||| || || | || ||| | | ||| | | ||| || || Sbjct 34904367 GACTTCCGCTGGTCGATCCCCCACCTCGACCCGGTCACCAAGCAGCCCACCCCCTGGCCT 34904308 Query 1542 GCTGGTGAGCTCTTCTTCGAGCTAGACACCGGAGGCCAGCACAACGCGCTCCAGCAGGTC 1601 || || || || ||| |||| || || || || ||| ||||||||||||| || ||||| Sbjct 34904307 GCGGGCGACCTGTTCCTCGAACTGGAGACGGGCGGCGAGCACAACGCGCTGCACCAGGTG 34904248 Query 1602 CAGTTGTTCGGAGCCACAGGCGGTACGTACACCCTGAACGTCAACGGGGTCGACACCCCG 1661 | | ||| ||||| || || ||||||||||||||| ||||||| |||||||||| Sbjct 34904247 TACATCACCGGGGCCACGGGTGGCACGTACACCCTGAACCTCAACGGCACCGACACCCCG 34904188 Query 1662 CCCATCGACTACAACGACGTGTCCCAGAACCCGCAGGGTCTCGCTGGAGACCTCACCGAC 1721 ||||||||||||||||||||||| |||||||||||||||| || || ||| || ||| Sbjct 34904187 GCCATCGACTACAACGACGTGTCCGAGAACCCGCAGGGTCTGGCCGGTGACATCCAGGAC 34904128 Query 1722 GCCCTGGAGGCGGCGGTCGGAGTGGGCAACGTCAAGGTCCACCCGGTGCTGCTGATCCCG 1781 ||| | || |||||| |||| | || |||| | ||| || ||||| |||| |||| Sbjct 34904127 GCCATCGACGCGGCGCTCGGGGCCGGTAACGGCCTGGTGCATCCGGTCTCGCTGTTCCCC 34904068 Query 1782 GCCTGGACGCTCCACTTCAACCTGAACAGCGGCAAGCCGCTCACCGAGCAGCTCGTCAAC 1841 || |||||||| |||||||||||||| | ||||||| || ||||||||| | |||||| Sbjct 34904067 GCGTGGACGCTGAACTTCAACCTGAACGCCAGCAAGCCTCTGACCGAGCAGTTGGTCAAC 34904008 Query 1842 ACGATCAACAAGACCACGAACGACTTCTTCAACACGTTCGAGCAGCTCTTCGGTGTCGAC 1901 |||||||||||| ||||||||||||||||| | ||||||| |||||| |||| |||||| Sbjct 34904007 ACGATCAACAAGGCCACGAACGACTTCTTCGATGCGTTCGACCAGCTCCTCGGGGTCGAC 34903948 Query 1902 GTGCAGATGACCGTCACCGACGTGCTCAACTTCAAGCTGAAGGTGACCTCCCTCAAGTCG 1961 ||| ||||||| ||||||||| || |||||| |||| ||||||||||| | ||| Sbjct 34903947 GTGGAGATGACGGTCACCGACACCCTGAACTTCCAGCTCAAGGTGACCTCGCGGCGCTCG 34903888 Query 1962 TTCGATGAGGTCGGAGCTGTCACGTTCGCGGTCGACATCACGTCCACGATGGTGAAGAAC 2021 |||||||||||||| | ||||| |||||||||||| | || || ||| ||| |||||| Sbjct 34903887 TTCGATGAGGTCGGCGTCGTCACCTTCGCGGTCGACGTGACCTCGACGGCGGTCAAGAAC 34903828 Query 2022 TTCTTCAACTCCGTGGCTGGTCTGATCGGAGCAGTCAACACGGTCAACGTCGACTTCTAC 2081 ||||||||| | | | || |||||||| || || ||||| |||||||||||||||||| Sbjct 34903827 TTCTTCAACGGCTTCTCCGGGCTGATCGGCGCGGTGAACACCGTCAACGTCGACTTCTAC 34903768 Query 2082 TGGAACCGGACGTACGACGTGGAGTTCACGGGAGCGCTCGCGCTCACCCCGGT-CCCGCC 2140 ||||||||||| |||||| | |||||| || | ||| || || ||||| |||||| Sbjct 34903767 TGGAACCGGACCTACGACATCGAGTTCGTCGGCGAGCTGGCCGAGACGCCGGTACCCGCC 34903708 Score = 93.3 bits (102), Expect = 1e-14 Identities = 104/134 (78%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 4269 CCAAGCAGGCGGTCCCCTAGCTCAGAGGGGAGCCCCTGCGCTGGGT-CA-GTAGCTCAAC 4326 |||||| |||||| ||| || | | |||||||||| || | || || ||||||||| Sbjct 34903374 CCAAGCGGGCGGTTCCCCAGAGC-GTGGGGAGCCCCCGCACCAAGTACACGTAGCTCAAT 34903316 Query 4327 TGGAAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCCTCCCTGGCCTGCAC 4386 ||| ||||||| ||||||||||||||| ||| |||||||| |||| | | ||| | Sbjct 34903315 TGGTAGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTGGCGTGTATGC-C 34903257 Query 4387 ACCACCCGTCCCCG 4400 ||||||| |||||| Sbjct 34903256 ACCACCCTTCCCCG 34903243 >seq18 Length=36757632 Score = 529 bits (586), Expect = 6e-146 Identities = 657/904 (73%), Gaps = 64/904 (7%) Strand=Plus/Plus Query 33032 AGGTGAGGAACTGGTCATCGTCCAACTCCGAGAACCGAATACGCCGGTTGAAGTACCGGG 33091 |||| ||||||||||| | ||||| | |||||||||| || |||||| |||||||||||| Sbjct 22717043 AGGTCAGGAACTGGTCGTTGTCCAGCACCGAGAACCGGATGCGCCGGATGAAGTACCGGG 22717102 Query 33092 CGAAGATCGGGTGGATACCCTCAGACACACCCGGCATCTTGGCGATGGTCCCCGTAGGCG 33151 |||||||||||||||||||||| || || |||||||| ||||||||||| || || | Sbjct 22717103 AGAAGATCGGGTGGATACCCTCACTGACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGG 22717162 Query 33152 CGACCGTGCGCTTCTTCACCGGCACCGGGATACGCAACTGGTGTGCATAGTCCTCCGCAG 33211 | |||||||||||||| |||||||||||||| ||||||| || | ||||| || | Sbjct 22717163 CCACCGTGCGCTTCTTGACCGGCACCGGGATCCGCAACTCATGGCTGAACTCCTCGGCCG 22717222 Query 33212 CCTCATCGACGGTCTTGGCGAGACCCCGCAGCATGTCCTTGAAGTTCCGGTTCGTC---- 33267 | ||||| ||| | |||||| | | |||| ||| || ||| Sbjct 22717223 CTCTGTCGACCTCAGCGGCCATCTCCCGCAAGAAAGCGGTGAA---CCGCTT-GTCTCCG 22717278 Query 33268 GGAGCCTCCGAGTAGCGCTGGTTGCGGAGTGCCAGGAACGACGCCACGCCCAGGTGGCCG 33327 || |||| ||| || | || || |||| | || ||||| || ||||| || Sbjct 22717279 GGTGCCTGCGAATACCTACGGCCTGTCAGGGCCAAATAGGAGGCCACTCCGAGGTGCCCA 22717338 Query 33328 ACACCGATACGCCGGTTGCGGTCCAAGACCTCTCGCGACTTCGGATCTGCGACAGGCGAG 33387 |||||||| ||||||||||| |||| |||||||| ||||||||| ||||| | ||| Sbjct 22717339 ACACCGATGCGCCGGTTGCGATCCAGAACCTCTCGGCTCTTCGGATCAGCGACCGCTGAG 22717398 Query 33388 AACGTCGCCCGCATCAGGAACCTGGTGATCAGCCTGTGCGCCCGCACGAGGTCGATGTAG 33447 ||||||||||| |||||||||| || ||||| | ||| || || | |||||||||||| Sbjct 22717399 AACGTCGCCCGGATCAGGAACCGCGTCATCAGACGGTGGGCTCGGATCAGGTCGATGTAG 22717458 Query 33448 TCGATCCTGCCGTTGTCCTTGACGAACGCCGCCAGGTTGACGTGACCCAGGTTGCACGGC 33507 ||| || | ||| ||| ||||||||||||| ||||||| ||| || |||||||| ||| Sbjct 22717459 TCGGTCTTCCCGGCGTCGGTGACGAACGCCGCGAGGTTGATGTGCCCTAGGTTGCAGGGC 22717518 Query 33508 TCCCACGGTTCGAGCGTGATCTCACCGCAGGGGTTCGTACAGACAACCCTGTTTGGCTCA 33567 |||||||| || ||||||||||| ||||| ||||| || ||||| ||| ||| |||||| Sbjct 22717519 TCCCACGGCTCCAGCGTGATCTCCCCGCACGGGTTGGTGCAGACGACCTCGTTGGGCTCA 22717578 Query 33568 CCGACGTTGGACAACGAGCTGTCCCACATCCCCGGCTCTCCGTTGTGAACTGCTCCTTCG 33627 ||||||||||||| ||||||||||||||||||||| |||||| | || ||||| ||| Sbjct 22717579 CCGACGTTGGACAGGCTGCTGTCCCACATCCCCGGCTCGCCGTTGCGTACGGCTCCCTCG 22717638 Query 33628 GATAAGGCTTTGAGGACTCGATCCGCGGTGTCGTACTTGGAGAACTCGATGCCTATTGGG 33687 || | || || || || ||| ||| | | | ||||| | | || | ||| Sbjct 22717639 GAGAGAGCCTTCAGCAC-----CCGGTGTG-CCTTCGTGGAGCGCGGGTTG---AGCGGG 22717689 Query 33688 CCG---TGATGCACGGCC---TTCCAGAACTCGTCATCTACCTCGACCGAGATGTTCGTT 33741 || || | |||| |||||||| | || || |||||||||||||||||||| Sbjct 22717690 TCGACAGGAGCCTTGGCCAGGCTCCAGAACGCATCGTCCACCTCGACCGAGATGTTCGTG 22717749 Query 33742 GTCCAGTGCGA----------------------------------------AGCCG-AGT 33760 |||||||| || | ||| || Sbjct 22717750 GTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCCAGTGAGATCCGCTGT 22717809 Query 33761 CAGCCTTGCAGTTGATGAACTCCTCGATCTGGAAGTCGTTCCAGTGCATCATCGACATGC 33820 | |||| |||| ||||| |||| ||| |||| |||||||||||||| ||||| Sbjct 22717810 CCTGCTTGATGTTGGTGAACGTCTCGCCCTGCCAGTCCGCCCAGTGCATCATCGCCATGC 22717869 Query 33821 GAGCAGACCGACGAACACCACCAGCCACCACACACTGCGCGATAGCGTGGTCGATCTCCA 33880 |||| ||||| |||||||| || |||||||||||||||||||| |||||||||||||||| Sbjct 22717870 GAGCCGACCGGCGAACACCTCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCA 22717929 Query 33881 TCGC 33884 |||| Sbjct 22717930 TCGC 22717933 >seq8 Length=24646021 Score = 383 bits (424), Expect = 5e-102 Identities = 615/877 (70%), Gaps = 40/877 (5%) Strand=Plus/Minus Query 10836 TTCAAGGCGTTCCTGACTCCTGAGCAGTCGAAGGACTACTTCGCGAAGGCCGAGAAGACC 10895 ||||||| | |||| || |||||| ||||||| |||||||| |||||||||||||| Sbjct 19507257 TTCAAGGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACC 19507198 Query 10896 TCGATTGTCCAGAAGCTCGCCACGAAGATCCCGATGGGTCCGACTGGCATCACCATCCCG 10955 ||||| |||||| || ||||| |||| | ||||||||| | || ||| | |||||| Sbjct 19507197 TCGATCGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCG 19507138 Query 10956 TACTGGAACGGCGCGGTGACCGCCGAGTGGGTCGGTGAGGGCGAAATGAAGCCCCTGACC 11015 ||||| ||||| |||| ||| ||||| |||||||||| || ||||||||| | ||| Sbjct 19507137 CACTGGGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACC 19507078 Query 11016 AAGGGTTCGTTCGCGAAGAAGGACCTGACCCCGGTCAAGATCGCGGTCATCTTCGCAGAG 11075 ||||| | | | || | | | || |||||||||| ||||||| | | Sbjct 19507077 AAGGGCAACATGACTTCGCAGACCATCGCGCCCCACAAGATCGCGACGATCTTCGTGGCG 19507018 Query 11076 AGTGCTGAGGTCGTGCGTCTCAACCCGCTTCAGTACCTGGAGACGATGAAGACCAAGATC 11135 ||| ||| ||| ||| |||||| | ||||||| || ||| |||||| | Sbjct 19507017 TCTGCGGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTG 19506958 Query 11136 GCGGAAGCGTTCGCGCTGAAGTTCGACGCGGCTGCCATCCACGGCATCGACAAGCCGACC 11195 ||| || |||||| || |||||||| || || || ||||||| |||| |||| Sbjct 19506957 GCGACCGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGAC-AGCC---- 19506903 Query 11196 GCGTTCAAGGGCTACCTGACCGAGACCTCGCAGTCTGTCTC----GCTGA-ACC------ 11244 ||||| | |||| | ||||| | || | |||| ||||| ||| Sbjct 19506902 -CGTTCCCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACCACCGGT 19506844 Query 11245 ----CGAGCGCGTACGACGCTGTCGGTGTCACCGGCCTGGCGACT-CTGGTCGACGGCGG 11299 ||| || ||||||| || | || | |||||| | | || ||||| ||| ||| Sbjct 19506843 GCCACGACCGTGTACGACCAGGTGGCCGTGAACGGCCT-GAGCCTGCTGGTGAACGACGG 19506785 Query 11300 CAAGAAGTGGACCGGCACTCTGCTGGACGATGTTGCCGAGCCGATCCTCAACGGCGCGAA 11359 ||||||||||||| ||| || |||||||| | ||||||||||||| ||||||||||| Sbjct 19506784 CAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAACGGCGCGAA 19506725 Query 11360 GGACCTCAACGGTCGCCCGCTGTTCGTGGAGTCCCTGTACGACAACGTCGTGAACCCGAT 11419 ||||| |||||||||||||||||| | ||||| |||| | | || || |||| | Sbjct 19506724 GGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAGGCCGCGAGCCCGTT 19506665 Query 11420 CCGCGAGGGCCGCATTCTGGGCCGGCCTACCTACATCAACGACCACGTCGTGAGCGCTGG 11479 ||| |||||| || | | ||| || ||| | ||| ||||||||||||| | || Sbjct 19506664 CCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGTG---GAGGG 19506608 Query 11480 CGCTCCCGGCTCCCGAGTCGTCGGCGTCATGGGCGACTTCAGCCAGGTCGTGTGGGGCCA 11539 | | | || |||||| ||||||| |||||| |||| || | |||||||| Sbjct 19506607 CAC-CACG-----------GTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGCCA 19506560 Query 11540 GATCGGTGGTATCAGCGTCGACGTTTCGCAGGAGACGGTGCTGAACTTCGGCACTCCCGA 11599 |||||| ||| | | ||||||| || | || || |||||| | ||||| ||| Sbjct 19506559 GATCGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTCGA 19506500 Query 11600 -AGCGCCCAACTTCATCTCCCTGTGGCAGCACAACATGCTCGCTGTCCGGATCGAGGCCG 11658 ||| || |||||| |||| ||||||||||||||| | |||| ||||| ||||||| | Sbjct 19506499 GAGC-CCGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGCTG 19506441 Query 11659 AGTACGCCTTCATGGTCAACGACAAGGACGCCTTCGT 11695 ||||||| ||| ||||||| || || ||||| Sbjct 19506440 AGTACGCGTTCCACTGCAACGACGCCGAGGCGTTCGT 19506404 Score = 179 bits (198), Expect = 1e-40 Identities = 438/659 (66%), Gaps = 45/659 (7%) Strand=Plus/Minus Query 9631 GAGTGGTTCGTGCAGAACATGGAGCCAGCGCGAAAGCAGATGTCCCAGATGGACTCTCGC 9690 ||||||||||| |||||||||||| || |||||| | |||| ||| ||||||| Sbjct 19508533 GAGTGGTTCGTCAGGAACATGGAGCCCGCACGAAAGGGGTTGTCGCAGGCCGACTCTCCT 19508474 Query 9691 GAGAACGCTGTCGCCAACATGGTTCTGCGGGCTGTACGGGAAGTTGAGAACGCGGGCAGA 9750 | || ||| |||| || || | | || || ||||| |||| || || | Sbjct 19508473 CAAGCTGCGGTCACCAAGCTGACCTTGGCGACAGTGCGCGAAGTGGAGATGGCAGGTCGC 19508414 Query 9751 CGACAGATCATCCACGCAGTACAGACTGACCCAGAGCCCCAGGTTGTGAAGGGCTGGGCC 9810 |||||||||||| ||| || ||| ||||||| || ||| | |||||||||||||| Sbjct 19508413 CGACAGATCATCGGCGCTGTCAAGAACGACCCAGCTCCTCAGATCGTGAAGGGCTGGGCG 19508354 Query 9811 AGGGTGGCGACCGGGCGCGAAACATGCGCCTGGTGCCTCATGCTCGTGTCGAGAGGGCCG 9870 ||||| || |||||||||||||||||||||||||| || ||||| | || | || || Sbjct 19508353 AGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCTGATGCTGATTTCCCGTGGCCCC 19508294 Query 9871 GTCTACGAATCCGCAAGGACTTC--CGGCCTGGAGCTCGATGACGAGACTGCCGTGGA-- 9926 | ||| || || ||| | || || | ||||| |||||| | || || Sbjct 19508293 GAGTACCTTTCGGC--GGATAGCGGGGGTCTTCACCTCGACACCGAGACCGTGGTCGACC 19508236 Query 9927 -CTTGTACAGGGCTG-------------GAA-----TGGATGTCACCGAG---TACATGA 9964 || | || ||||| ||| || | ||| || |||| Sbjct 19508235 TCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTCCGCGAAGAGACCAAGCCCCACATCG 19508176 Query 9965 ATCAGTGGCACACCGGCTGTGACTGCAAAGTGGTTCCGGTCTTCGACCTTCAGAACTGGC 10024 | |||||||| | || || |||||| ||||| || ||||||||| | ||||||||| Sbjct 19508175 AGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGTCTTCGACGTGGAGAACTGGC 19508116 Query 10025 CTGGCAAAGAGGCGGCAGACG-CCGCGCTC--AAGCTCTGGATAGAGGCCGGTAAAGAGG 10081 | || | |||| ||| | | ||||||| |||||||||| || || || ||||| | Sbjct 19508115 CCGG---AAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGATCGACGCTGGGAAAGAAG 19508059 Query 10082 CCGACAGGCTGATCGAATCCGGCGAAGCTCGCACGGACAACGTGAACCGAGAAACCATCA 10141 || | ||| || | ||| ||| | || ||| | | |||| |||| || || |||| Sbjct 19508058 CCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGAGAACAAGGAGACGATCA 19507999 Query 10142 ACGCACTTCGCCGACGCCTAGCGCGTGGCGAGATCAACACGTCCCAACTCGCTGCTCTCG 10201 |||| || || || ||| | || |||||| || | |||| | | || |||| Sbjct 19507998 ACGCTCTCCGTCGCCGCTTGTATCGCGGCGAGTTCGCAATGTCCGA---CTACGCACTCG 19507942 Query 10202 CAGCGTAACTCACTGTTCAACGGCCCCCAGGTGGGGCCTATCAAGTATGCCCAGGAGGC 10260 | |||||| | | || ||||||||||| | ||||| ||||||||||||| Sbjct 19507941 CTGCGTAA-------TCCCCCGAACCCCAGGTGGGTTC-ATCAACCATGCCCAGGAGGC 19507891 Score = 140 bits (154), Expect = 1e-28 Identities = 272/393 (69%), Gaps = 14/393 (4%) Strand=Plus/Minus Query 11791 GAGGAGAAACA--TGGCGCAAGCCACCGC-GACTGACGTGACGGTGTTCTGGGCGCGTAC 11847 |||||| |||| |||| | || ||||| ||| ||||| | ||| ||||| Sbjct 19506150 GAGGAGTAACACATGGCCTACGCGACCGCTGAC-GACGTTGTGACGTTGTGGGCCAAGGA 19506092 Query 11848 GCCTACGACCGAAGAGGTCGCGCTGATCGACCGGCGACTGGAACAGGCTGAGCGGCTCCT 11907 |||| | | |||| | ||||||||||| || ||||| ||||||| ||||| | | Sbjct 19506091 GCCTGAGCCAGAAGTCATGGCGCTGATCGAGCGCCGACTCGAACAGGTCGAGCGCATGAT 19506032 Query 11908 CAAGAAGTCG-ATCCCCGATCTGGACGACCGCTGCGCTGCTGACCCCATCTTCAAGGCCG 11966 | | |||| ||||| |||||||||| | | || | ||| |||||| ||||| Sbjct 19506031 CCGGC-GTCGGATCCCAGATCTGGACGCCAGGGTGTCTTCGGAC---ATCTTCCGGGCCG 19505976 Query 11967 ACGTGATCGACATCGAGGCCGAGGCCGTGCTGAGGCTCGTCCGGAACCACGAGGGGTACA 12026 | ||||||||||||||||||| || |||||| | || || || |||| ||||| ||| Sbjct 19505975 ATCTGATCGACATCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAACCCGGAGGGCTACC 19505916 Query 12027 TCTCCGAGACGGACGGCAACTACACGTACATGCTCCAGGCTCAGGACCCGAACCGGAAGC 12086 |||| ||||| ||||| ||||| ||| |||||||||| | | | | |||| Sbjct 19505915 TCTCGGAGACCGACGGGGCGTACACCTACCAGCTCCAGGCTGATCTGTCTCAGGGCAAGC 19505856 Query 12087 TGGAGATCCTCCCCGAAGAGTGGGAGCTGTTGGGCATCAAGCGGACT----CGCATGGCG 12142 | | ||||| |||||||||| | ||||| |||| | |||| |||||| | Sbjct 19505855 TCGTCATCCTTGGCGAAGAGTGGACGACCTTGGGAGTCAA-CCGACTCTCGCGCATGTCC 19505797 Query 12143 ATCCTCGTTCCGGATGTGGTGATGCCGTCGTGA 12175 | | |||| ||| | | ||||||||| | ||| Sbjct 19505796 ACCATCGTCCCGAACATCGTGATGCCGACATGA 19505764 Score = 89.7 bits (98), Expect = 2e-13 Identities = 145/203 (71%), Gaps = 12/203 (6%) Strand=Plus/Minus Query 12197 AAGTCAACTCCACGGGGTGCGATCACTGGGCAGATCCTCCGGTGGTCAAGTGCATCCACG 12256 ||||| || || || |||||| ||| || ||||||||||| | | ||| |||||| Sbjct 19505694 AAGTCGACGCCGCGATGTGCGACCACGAAGCGGATCCTCCGGTCTGCTACTGCGTCCACG 19505635 Query 12257 ACTGGCGCATTGTCTGGGGCAACGTGCCCCGCACGATCA--CCG---GGGA-GTTCAAGC 12310 |||||||||| | | |||||||| | ||| | || ||| | || || || Sbjct 19505634 ACTGGCGCATCGAGTTCGGCAACGTCTCTCGCCAGCCCAAGCCGAAAGCGACGTACATCT 19505575 Query 12311 GATGAGCCTCCTGGAT-CAGGGCACCG--ACGA---CGTGATCGTCTACCCCGAAGAAGT 12364 |||||||||||| ||| | || ||| || | ||| |||||||||||||||| | Sbjct 19505574 GATGAGCCTCCTCGATACCGGAGCCCGGTACCAGCCGGTGCTCGTCTACCCCGAAGAGCT 19505515 Query 12365 CGTCATCGACAAGGACGGGAACA 12387 ||||||||| ||||||||||| Sbjct 19505514 GGTCATCGACGCGGACGGGAACA 19505492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162083751508224