Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq11 185 1e-40 seq6 179 6e-39 seq2 178 2e-38 seq13 174 2e-37 >seq11 Length=45114658 Score = 185 bits (204), Expect = 1e-40 Identities = 236/324 (73%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| ||| |||||| |||||| ||| | || |||||||| || |||||| Sbjct 34047527 CCTTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTTAACCCAGGCATGAGCCCTCGCTTC 34047468 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||| | ||||| || || ||||| ||||| || |||||| || ||| Sbjct 34047467 TTAAGCCAGAAGATCGAGCAGAAGCTACCGGAGAAGAAGATCCCTTCGACGCAAGCGAAG 34047408 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||||| || |||||| ||||| | || || || ||||||| |||| ||||| Sbjct 34047407 GCGACGATCCTCTCGGCGAAAGTCTG-AGATCC-----GTCGATCCACGTCATGGCCCAT 34047354 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| ||| || | || | || || || ||||| || ||||||||| |||| Sbjct 34047353 TGGGCCTTCTTCGCGACGCAAGGGATGGTCTCAATCGCGCGGAAAAGGTGGTCCCTCTCC 34047294 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 |||||||| ||| ||||||| ||||| ||| ||||||||||||| || || Sbjct 34047293 TTGTTGTCCTTGATGTACGTGTCGAGCAGGAGGCTGTACATCTCTGAGTGGATATTCTCA 34047234 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 || ||||||||||| || || ||| Sbjct 34047233 ATCGCGATCTGGAACCCGTAGAAG 34047210 Score = 161 bits (178), Expect = 2e-33 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| ||||| || || |||||| || ||| || ||||| ||||| ||| Sbjct 34047203 GCCTCGGAGACTTGCACGTCGGACATGAACCGCGAGGCGAGATTCTCCAAAACGATTCCG 34047144 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || ||||||||| |||||||||||||| ||||| ||||| ||||| ||||| |||| Sbjct 34047143 TCTGAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCTCCGTCGTTGAGA 34047084 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 |||||| | |||| | ||||||||| || ||||||||||| || ||||| Sbjct 34047083 TTCTCCCAGTCGCGATTGTCTTGGGAGAGGTCGACTTCTTCGGCGGTCCAGAAAGAGGCT 34047024 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 |||||||| |||||||||||||| ||| | |||| |||| ||||||| Sbjct 34047023 TCGGCCTTCTTGTACATCTCCCAGATCTGCGGGTATTGGATCGGGAACA 34046975 Score = 96.9 bits (106), Expect = 5e-14 Identities = 156/220 (71%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| ||||| || || |||| |||||||||||||||||||| ||||| || || Sbjct 34047816 CTCGAAGAAGTTTGTTTTCCCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGC 34047757 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | ||| |||| || |||| |||| || ||| || | || || || || || | Sbjct 34047756 CACACCGTACACCTTCCCGTACCCAAGCGCACCCAAA-AGCCTATCCGCCACAAACTCGA 34047698 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGA--GCGCCACGGGCAGCGACTCGCT 794101 | ||||| | ||| ||| | |||||| || | | |||| | || |||| |||| Sbjct 34047697 TATACTGACTCATCAGGTCACGGTTCATCCCAACCAAGGCGCAA--GGAAGCGCGTCGCA 34047640 Query 794102 GACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATC 794141 |||||||| ||||||||||||| || ||| || |||| Sbjct 34047639 CACAAACTCCCTCTCGATCTCGACCGCGTCGCAGACGATC 34047600 >seq6 Length=47127078 Score = 179 bits (198), Expect = 6e-39 Identities = 235/324 (73%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| ||| |||||| |||||| ||| | || |||||||| || |||||| Sbjct 44872392 CCTTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTTAAACCCGGCATGAGCCCTCGCTTC 44872333 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||| | ||||| || || ||||| ||||| || || ||| ||||| Sbjct 44872332 TTCAGCCAGAAGATCGAGCAGAAGCTACCGGAGAAGAAGATCCCTTCCACGCAAGCAAAC 44872273 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | |||| || |||||| ||||| | || || || |||||||||||| ||||| Sbjct 44872272 GCCACGATCCTCTCGGCGAAAGTCTG-AGATCC-----GTCGATCCACTTCATGGCCCAT 44872219 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| ||| || | || | || || || ||||| |||||||||||| |||| Sbjct 44872218 TGGGCCTTCTTCGCGACGCAAGGGATGGTTTCAATCGCGCGGAAGAGGTGGTCCCTCTCT 44872159 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 ||||||| ||| ||||||| ||||| ||| ||||||||||||| || || Sbjct 44872158 TTGTTATCCTTGATGTACGTGTCGAGCAGGAGGCTGTACATCTCTGAGTGGATATTCTCA 44872099 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 || ||||||||||| || || ||| Sbjct 44872098 ATCGCGATCTGGAACCCGTAGAAG 44872075 Score = 178 bits (196), Expect = 2e-38 Identities = 179/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| ||||| || || |||||| ||| ||| || ||||| ||||| ||| Sbjct 44872068 GCCTCGGAGACTTGCACGTCGGACATGAACCGGGAGGCGAGATTCTCCAAAACGATTCCG 44872009 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| |||||||||||||| ||||| ||||| ||||| ||||| |||| Sbjct 44872008 TCGGAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCTCCGTCGTTGAGA 44871949 Query 796270 GAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 |||||| | ||||| ||| ||| ||||| || ||||||||||| || ||||| Sbjct 44871948 TTCTCCCAGTCGCGAGTGTCTTGCGA-GAGATCGACTTCTTCGGCGGTCCAGAAAGAGGC 44871890 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||||||||| |||||||||||||| ||| | ||||| |||| ||||||| Sbjct 44871889 CTCGGCCTTCTTGTACATCTCCCAGATCTGCGGGTAGTGGATCGGGAACA 44871840 >seq2 Length=31488241 Score = 178 bits (196), Expect = 2e-38 Identities = 179/232 (77%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || || || || |||||| ||| ||| || ||||| ||||| ||| Sbjct 7377320 GCCTCGGAGACCTGCACGTCGGACATGAACCGGGAGGCGAGATTCTCGAGGACGATTCCG 7377379 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| |||||||||||||| ||||| ||||| |||||| ||||| |||| Sbjct 7377380 TCGGAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCGCCGTCGTTGAGG 7377439 Query 796270 GAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | ||||| | ||||||||| |||||||||||||| |||||| Sbjct 7377440 TTGGTCTCCCAGTCGCGGGTGTCTTGGGAGAGGTCGACTTCCTCGGCGGTCCAGAAGGAG 7377499 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 || ||||| || |||||||||||||| ||| | ||||| |||| ||||||| Sbjct 7377500 GCTTCGGCTTTCTTGTACATCTCCCAGATCTGCGGGTAGTGGATCGGGAACA 7377551 Score = 178 bits (196), Expect = 2e-38 Identities = 179/232 (77%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || || || || |||||| ||| ||| || ||||| ||||| ||| Sbjct 27066116 GCCTCGGAGACCTGCACGTCGGACATGAACCGGGAGGCGAGATTCTCGAGGACGATTCCG 27066057 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| |||||||||||||| ||||| ||||| |||||| ||||| |||| Sbjct 27066056 TCGGAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCGCCGTCGTTGAGG 27065997 Query 796270 GAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | ||||| | ||||||||| |||||||||||||| |||||| Sbjct 27065996 TTGTTCTCCCAGTCGCGGGTGTCTTGGGAGAGGTCGACTTCCTCGGCGGTCCAGAAGGAG 27065937 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 || ||||| || |||||||||||||| ||| | ||||| |||| ||||||| Sbjct 27065936 GCTTCGGCTTTCTTGTACATCTCCCAGATCTGCGGGTAGTGGATCGGGAACA 27065885 Score = 161 bits (178), Expect = 2e-33 Identities = 231/324 (71%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || ||||| |||||| ||| ||| || |||||||| || |||||| Sbjct 7376996 CCTTCGTCCCGCGAGATCAGCTCGTTGGAGAAGGTGAGCCCCGGCATGAGCCCTCGCTTC 7377055 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||||| || || ||||| ||||| || || ||| || ||| Sbjct 7377056 TTGAGCCAGAAGATGGAGCAGAAGCTTCCGGAGAAGAAGATCCCTTCCACGCACGCGAAG 7377115 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | |||| || |||||| ||||| | || || | ||||||||||| ||||| Sbjct 7377116 GCCACGATCCTCTCGGCGAAAGTCT-GAGATCC-----ATCGATCCACTTCAAAGCCCAT 7377169 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| ||| || | || | || || || ||||| ||||| |||||| |||| Sbjct 7377170 TGGGCCTTCTTCGCGACGCAAGGGATGGTCTCAATCGCGCGGAAGAGATGGTCCCTCTCC 7377229 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 |||||||| ||| || || | | ||| ||| |||| |||||||| || || Sbjct 7377230 TTGTTGTCCTTGATGTACGTATCTAGCAAGAGGCTGTACATCTCCGAGTGGATATTCTCA 7377289 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 || ||||||||||| || || ||| Sbjct 7377290 ATCGCGATCTGGAACCCGTAGAAG 7377313 Score = 161 bits (178), Expect = 2e-33 Identities = 231/324 (71%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || ||||| |||||| ||| ||| || |||||||| || |||||| Sbjct 27066440 CCTTCGTCCCGCGAGATCAGCTCGTTGGAGAAGGTGAGCCCCGGCATGAGCCCTCGCTTC 27066381 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||||| || || ||||| ||||| || || ||| || ||| Sbjct 27066380 TTGAGCCAGAAGATGGAGCAGAAGCTTCCGGAGAAGAAGATCCCTTCCACGCACGCGAAG 27066321 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | |||| || |||||| ||||| | || || | ||||||||||| ||||| Sbjct 27066320 GCCACGATCCTCTCGGCGAAAGTCT-GAGATCC-----ATCGATCCACTTCAAAGCCCAT 27066267 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| ||| || | || | || || || ||||| ||||| |||||| |||| Sbjct 27066266 TGGGCCTTCTTCGCGACGCAAGGGATGGTCTCAATCGCGCGGAAGAGATGGTCCCTCTCC 27066207 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 |||||||| ||| || || | | ||| ||| |||| |||||||| || || Sbjct 27066206 TTGTTGTCCTTGATGTACGTATCTAGCAAGAGGCTGTACATCTCCGAGTGGATATTCTCA 27066147 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 || ||||||||||| || || ||| Sbjct 27066146 ATCGCGATCTGGAACCCGTAGAAG 27066123 Score = 96.9 bits (106), Expect = 5e-14 Identities = 203/295 (69%), Gaps = 6/295 (2%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| || || || || |||| |||||||||||||||||||| ||||| || || Sbjct 7376707 CTCGAAGAAATTCGTTTTACCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGC 7376766 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | ||| |||| || |||| |||| || ||| || | || || || || |||| Sbjct 7376767 CACACCGTACACCTTCCCGTACCCAAGCGCACCCAA-AAGCCTATCCGCCACAAACTCAA 7376825 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 | ||||| | ||| | | | |||||| || | | ||| ||| |||| |||| | Sbjct 7376826 TATACTGACTCATCAAGTCCCGGTTCATCCCCACCAACGCGCAGGGAAGCGCGTCGCACA 7376885 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGAC 794162 ||||||| |||||||||| || || ||| | |||| | || | || || ||| Sbjct 7376886 CAAACTCCCTCTCGATCTCCACCGCGTCGCACACGATC-GACTTCACGCGCTCCTCCGAT 7376944 Query 794163 GGCTT-GTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 |||| ||| | | || || |||| |||||| || |||||||| || || ||| Sbjct 7376945 AGCTTCGTCCTC-AACAAGGTATAGATCAGGCACGCGAAGTCGCAGTGAAGGCCT 7376998 Score = 96.9 bits (106), Expect = 5e-14 Identities = 203/295 (69%), Gaps = 6/295 (2%) Strand=Plus/Minus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| || || || || |||| |||||||||||||||||||| ||||| || || Sbjct 27066729 CTCGAAGAAATTCGTTTTACCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGC 27066670 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | ||| |||| || |||| |||| || ||| || | || || || || |||| Sbjct 27066669 CACACCGTACACCTTCCCGTACCCAAGCGCACCCAA-AAGCCTATCCGCCACAAACTCAA 27066611 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 | ||||| | ||| | | | |||||| || | | ||| ||| |||| |||| | Sbjct 27066610 TATACTGACTCATCAAGTCCCGGTTCATCCCCACCAACGCGCAGGGAAGCGCGTCGCACA 27066551 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGAC 794162 ||||||| |||||||||| || || ||| | |||| | || | || || ||| Sbjct 27066550 CAAACTCCCTCTCGATCTCCACCGCGTCGCACACGATC-GACTTCACGCGCTCCTCCGAT 27066492 Query 794163 GGCTT-GTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 |||| ||| | | || || |||| |||||| || |||||||| || || ||| Sbjct 27066491 AGCTTCGTCCTC-AACAAGGTATAGATCAGGCACGCGAAGTCGCAGTGAAGGCCT 27066438 >seq13 Length=54295181 Score = 174 bits (192), Expect = 2e-37 Identities = 178/232 (77%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || || || || |||||| ||| ||| || ||||| ||||| ||| Sbjct 40048488 GCCTCGGAGACCTGCACGTCGGACATGAACCGGGTGGCGAGATTCTCGAGGACGATTCCG 40048547 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| |||||||||||||| ||||| ||||| ||||| ||||| |||| Sbjct 40048548 TCGGAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCTCCGTCGTTGAGG 40048607 Query 796270 GAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | ||||| | ||||||||| |||||||||||||| |||||| Sbjct 40048608 TTGTTCTCCCAGTCGCGGGTGTCTTGGGAGAGGTCGACTTCCTCGGCGGTCCAGAAGGAG 40048667 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 || ||||| || |||||||||||||| ||| | ||||| |||| ||||||| Sbjct 40048668 GCTTCGGCTTTCTTGTACATCTCCCAGATCTGCGGGTAGTGGATTGGGAACA 40048719 Score = 161 bits (178), Expect = 2e-33 Identities = 231/324 (71%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || ||||| |||||| ||| || || |||||||| || |||||| Sbjct 40048164 CCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTAAGCCCCGGCATGAGCCCTCGCTTC 40048223 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | ||||| || || ||||| ||||| || || ||| || || Sbjct 40048224 TTGAGCCAGAAGATCGAGCAGAAGCTACCGGAGAAGAAGATCCCTTCCACGCAAGCGAAC 40048283 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | |||| || |||||| ||||| | || || || |||||||||||| ||||| Sbjct 40048284 GCCACGATCCTCTCGGCGAAAGTCTG-AGATCC-----GTCGATCCACTTCATGGCCCAT 40048337 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| ||| || | || | || || || ||||| ||||| |||||| |||| Sbjct 40048338 TGGGCCTTCTTCACGACGCAAGGGATGGTTTCAATCGCGCGGAAGAGATGGTCCCTCTCC 40048397 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 |||||||| ||| || || | | ||| ||| |||| |||||||| || ||| Sbjct 40048398 TTGTTGTCCTTGATGTACGTATCTAACAAGAGGCTGTACATCTCCGAGTGGATATTCTCG 40048457 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 || ||||||||||| || || ||| Sbjct 40048458 ATCGCGATCTGGAACCCGTAGAAG 40048481 Score = 98.7 bits (108), Expect = 2e-14 Identities = 131/181 (72%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| ||| |||||| |||||| ||| | || |||||||| || || ||| Sbjct 47366353 CCGTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTCAAACCAGGCATGAGCCCTCGTTTC 47366294 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | ||||| || || ||||| ||||| || ||| || ||||||| Sbjct 47366293 TTGAGCCAGAAGATCGAGCAGAAGCTACCGGAGAAGAAGATCCCTTCGGCGCAGGCAAAG 47366234 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||| || ||| || || || | || || || ||||||| ||||||||||| Sbjct 47366233 GCGACACTCCTCTCCGCGAAGGTCT-GAGATCC-----GTCGATCCACGTCATCGCCCAC 47366180 Query 794521 T 794521 | Sbjct 47366179 T 47366179 Score = 96.9 bits (106), Expect = 5e-14 Identities = 203/295 (69%), Gaps = 6/295 (2%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| || || || || |||| |||||||||||||||||||| ||||| || || Sbjct 40047875 CTCGAAGAAATTCGTTTTACCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGC 40047934 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | ||| |||| || |||| |||| || ||| || | || || ||||| |||| Sbjct 40047935 CACACCGTACACCTTCCCGTACCCAAGCGCACCCAA-AAGCCTATCCGCCACGAACTCAA 40047993 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 | ||||| | ||| | | | |||||| || | | ||| || |||| |||| | Sbjct 40047994 TATACTGACTCATCAAGTCCCGGTTCATCCCCACCAACGCGCAAGGAAGCGCGTCGCACA 40048053 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGAC 794162 ||||||| |||||||||| || || ||| | |||| | || | || || ||| Sbjct 40048054 CAAACTCCCTCTCGATCTCCACCGCGTCGCACACGATC-GACTTCACGCGCTCCTCCGAT 40048112 Query 794163 GGCTT-GTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 |||| ||| | || | || |||| |||||| || |||||||| || || ||| Sbjct 40048113 AGCTTCGTCCTCAAG-AGGGTATAGATCAGGCACGCGAAGTCGCAGTGAAGGCCT 40048166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916100028604064