Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_023565.1 Length=51250 Score E Sequences producing significant alignments: (Bits) Value seq8 847 0.0 seq18 610 2e-170 seq9 185 3e-42 seq1 102 3e-17 >seq8 Length=24646021 Score = 847 bits (938), Expect = 0.0 Identities = 1577/2273 (69%), Gaps = 122/2273 (5%) Strand=Plus/Minus Query 10318 CAGTACGCAGCGTCGAGAACGCCGGTCGGAAGCAGATCATCCGAGCGGTCGAGGACGACT 10377 |||| ||| || |||| || ||||| ||||||||| | || ||| || ||||| Sbjct 19508442 CAGTGCGCGAAGTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACC 19508383 Query 10378 CCGAGACCGGGACGGTCAAGGGCTGGGCGCGAGTAGCGACCGGTCGAGAAACGTGCGCCT 10437 | | | || || |||||||||||| | || || ||||| || ||||| ||||||| Sbjct 19508382 CAGCTCCTCAGATCGTGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCT 19508323 Query 10438 GGTGTCTGATGCTGATCTCACGAGGCCCCGTGTACTCCTCAGCGGAGAGCGCGGGGTTGG 10497 |||||||||||||||| || || ||||||| |||| || ||||| |||| ||| | Sbjct 19508322 GGTGTCTGATGCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTC 19508263 Query 10498 ACCTCGATGACCAGTCAGCGGCAGA--TGTGTTCCGCGCCAGCGGTGGTGACCTCAACAA 10555 ||||||| | || | | || || | || || | | | | | || || | || Sbjct 19508262 ACCTCGACACCGAGACCGTGGTCGACCTCTGGAACGAGGCTG--GCCGCGATCTGGAGAA 19508205 Query 10556 GCTCGCCGCCTATGTCGATGAGAACGA---CCTGATGAAGGAGTGGCATACAGGCTGCGA 10612 | || ||| || |||| | | || || |||||||||| |||| ||||| Sbjct 19508204 GTTC--CGC-------GAAGAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGA 19508154 Query 10613 CTGCAAGGTGGTGCCGGTCTATGACAGGGCCAACTGGCCCGGACGGGACGCCTACAAGCG 10672 |||| ||||||||| |||| ||| || |||||||||||| || ||| | | || Sbjct 19508153 CTGCCTGGTGGTGCCTGTCTTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACG 19508094 Query 10673 TGCCGAGCAGTTTTGGATCGACGCCACAAAGGAGGCTCGTCGCCTCATCGACTCAGGAAA 10732 || |||| | ||||||||||| || || || | | ||||| | || || || Sbjct 19508093 CGCTCTGCAGCTCTGGATCGACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAA 19508034 Query 10733 GTCGAAGAGCGACAACCTCAACCGAGAGGCGCAGAACGCGCTTCGTCGTCGTCTCGAACG 10792 | | | | ||| ||| ||| || ||||| || ||||| || | | || Sbjct 19508033 GGCCCGCTCCAAAAACGAGAACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCG 19507974 Query 10793 AGGCGACCTTTCAATGACGAGATTCGCCCTCGCGGCGTAACTCAACACCACGACCCCCTG 10852 ||||| | ||||| | | ||| ||||| |||||| || || ||| |||| | Sbjct 19507973 CGGCGAGTTCGCAATGTCCGACTACGCACTCGCTGCGTAA-TC----CCCCGAACCCCAG 19507919 Query 10853 GTGGGGTC--CAAC-ACGCCCAGGAGGC--AAACAGTATGGCTGACAACGACACTCAGAC 10907 ||||| || |||| | ||||||||||| ||||| ||| | |||| || ||| || Sbjct 19507918 GTGGGTTCATCAACCATGCCCAGGAGGCGAAAACAC-ATGTCCGACACCGTAACT---AC 19507863 Query 10908 CCCCGACACCACGCCGGGCAAT--GAC---GGAGG-CACCGACACGGGTCAGGCACCCGC 10961 | | ||| || | ||| | ||| || || ||| |||| | | || ||| | Sbjct 19507862 CGAAGGCACTCCGGCCGGCGACCCGACCCCGGTGGTCACTGACAAGCCGCTGGAACCGAC 19507803 Query 10962 ACCGGAGGTCTTCAGCCGGGAGTACGTCGAGGAGTTGAGGCGTGAGAACGCCAAGGCACG 11021 ||| || || | | || |||||| ||||| | | | ||| ||| || || Sbjct 19507802 TCCGAAGACCTACGACGAGGCATACGTCAAGGAGCTTCGCCAGGAGGCCGCTGCTGCTCG 19507743 Query 11022 CACCTCGAAGAACCAAGCGGTCGAAGACGC---CAAGGCAGAAGTCCGCAAGGAGTACGA 11078 | ||||| | || ||||||| ||| |||||| | | || | | || Sbjct 19507742 GGTTGCCAAGAAGGACGCAGTCGAAGCCGCAGTCAAGGCGGC-GAACG--ACGCTCACAC 19507686 Query 11079 GGCCAAGCTGGCCGAGAAGGACACGGCGTA-CACCGAGCTGCAGAACCAGCTCGGAGAGG 11137 ||| | || || | ||||| || | |||||||||| ||||| |||| ||| ||| Sbjct 19507685 CGCCGAACTCGCTGCTCGCGACACT-CGAATCACCGAGCTGGAGAACGAGCTGGGACAGG 19507627 Query 11138 CGTGGATCGAGCTGGAGAAGGTCTACACGACCATCGACGCCAAGGTCCCGTCTGATCGCG 11197 | |||||| |||| ||||| | | || | | | ||| ||||| || || | Sbjct 19507626 CTTGGATCCGGCTGCAGAAGCTGGAGACCTCGCTTGCCGCAAAGGTTCCCAGCGACAAGG 19507567 Query 11198 TCCGCGCTTTCGCGGCCATCCTGCAGGGGTCTGACAAGGAGTCGATCTCCGAATCGGCCA 11257 | | ||| |||| | |||| ||||||| ||| || |||||| |||| || || | Sbjct 19507566 TGCTCGCGTTCGTTGACATCTTGCAGGGCGAGGACGCTGACTCGATCGCCGAGTCCGCGA 19507507 Query 11258 AGTC-AGCCAAGCAACTGTTCGGCGGTAT-GACGGGCA-CCG--TCCCGGCCGTCGATCC 11312 || | || | ||||| |||||||| | ||| | | ||| | |||| |||| || Sbjct 19507506 AGAAGAACCTCG-AACTGATCGGCGGTTTCGACAAGAAGCCGGTTTCCGGTT-TCGACCC 19507449 Query 11313 CACCCAGGGCTCTGGTGGT-GGCAAGCACACGCCGCTCAACGGAGACCCGATCCTCGACG 11371 ||||||||||| |||||| |||| | || |||||||||||| |||||||||||| ||| Sbjct 19507448 CACCCAGGGCTTCGGTGGTCGGCAGGAACT-GCCGCTCAACGGTGACCCGATCCTCAACG 19507390 Query 11372 CGCT-----------TCG----CAAG-GCCGTCGGGGCGTAATCCCCACTAC--GACAAG 11413 | | ||| |||| | |||| | | || |||| | | |||||| Sbjct 19507389 CCATGAAGGGCGTTCTCGGCATCAAGTGATGTCGAGCTGAAA--CCCATTCCTAGACAAG 19507332 Query 11414 AA-AGTAGCATCATGGCACAAGGAACCACGTTCCAGGTCGATCACGCGCAGATCGCGCAG 11472 | | ||||| ||||| ||| || | ||| || |||||||| |||||||| ||| Sbjct 19507331 GAGATTAGCAG-ATGGCCGCAGGCACTGCTTTCGCAGTTGATCACGCTCAGATCGCCCAG 19507273 Query 11473 ACCGGCGACTCGATGTTCAAGGGCTACCTCGAGCCCGAGCAGGCCCAGGACTACTTCGCG 11532 |||||||| | ||||||||||||||||| |||||||||||||| |||| |||||||| Sbjct 19507272 ACCGGCGATACCATGTTCAAGGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCC 19507213 Query 11533 GAAGCGGAGAAGACCTCCATCGTCCAGCGTGTCGCTCGCAAGATTCCGATGGGATCGACC 11592 || || ||||||||||| |||||||||| |||| | ||| | |||||||| | || Sbjct 19507212 GAGGCCGAGAAGACCTCGATCGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACG 19507153 Query 11593 GGCGTCAAGATTCCGCACTGGACCGGCGATGTCGCCGCCGCGTGGATCGGTGAAGGCGAC 11652 ||| ||||| ||||||||| |||||| || ||| |||||||||||| || ||| Sbjct 19507152 GGCCAGAAGATCCCGCACTGGGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGAC 19507093 Query 11653 ATGAAGCCCATCACCAAGGGCGACATGACGGT-CA-ACCAGGTCGAGCCGCACAAGATCG 11710 ||||||||||||||||||||| ||||||| || |||| ||| ||| |||||||||| Sbjct 19507092 ATGAAGCCCATCACCAAGGGCAACATGACTTCGCAGACCA--TCGCGCCCCACAAGATCG 19507035 Query 11711 CCACGATCTTCATCGCCTCGGCTGAAACCGTTCGTGCGAACCCGGCGAACTACCTGGGCA 11770 | ||||||||| | || || || || ||||| ||||| ||||| || ||||||||||| | Sbjct 19507034 CGACGATCTTCGTGGCGTCTGCGGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAA 19506975 Query 11771 CCATGCGGGTCAAGGTCGGCACCGCCATCGCGCTGGCCTTCGATGACGCCGCGCTGCACG 11830 ||||||| |||||| | |||||| ||||| |||| ||||| | ||| ||| |||||| Sbjct 19506974 CCATGCGTACCAAGGTGGCGACCGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACG 19506915 Query 11831 GCACCGACAGCCCGTTC--GATCAGTTCGTGGATCAGACCACGAAGTCGGTCGACATCAC 11888 ||||||||||||||||| || | | | | | ||||||||| ||| | || || | Sbjct 19506914 GCACCGACAGCCCGTTCCCGACC--TACATCGGTCAGACCACCAAGGCCATCTCGATTGC 19506857 Query 11889 CCCGGCCGCGCCGG--CCACCACC---TACGACGCCATCGGCGTCAACGCGCTGTCGCTG 11943 | | | |||| |||| ||| |||||| | | ||| |||| ||| ||| Sbjct 19506856 T--GACACCACCGGTGCCACGACCGTGTACGACCAGGTGGCCGTGAACGGCCTGAGCCTG 19506799 Query 11944 CTCGTCAACGACGGCAAGAAGTGGCAGGCGACCCTGCTCGATGACATCGCTGAGCCCGTG 12003 || || |||||||||||||||||| ||||| || || |||||| | ||||| | Sbjct 19506798 CTGGTGAACGACGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATC 19506739 Query 12004 CTCAACGGTGCCAAGGACGCCAACGGCCGTCCGCTGTTCGTGGAGTCGACCTACGAGGGT 12063 || ||||| || |||||| ||||| || ||||||||| | ||||||||||||| || Sbjct 19506738 CTGAACGGCGCGAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACG---GT 19506682 Query 12064 CTGACCACG---CCGTACCGCGAGGGTCGCATCCTGGGTCGTACCACGATCCTGAGCGAC 12120 | || || |||| ||| ||| || ||| | | ||| | || ||||| |||||| Sbjct 19506681 GAGGCCGCGAGCCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGAC 19506622 Query 12121 CACGTCGCCACCGGCACCACGGTCGGCTACCAGGGCGACTTCTCCCAGATCGTGTGGGGC 12180 ||||||| |||||||||||||||| | ||| |||||||||||| || | |||||| Sbjct 19506621 CACGTCGTGGAGGGCACCACGGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGC 19506562 Query 12181 CAGGTCGGCGGTCTGTCCTTCGACGTGACGGACCAGGCGACCCTGAACCTGGGCACGATG 12240 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 19506561 CAGATCGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTC 19506502 Query 12241 GAAGAGCCC-AAGTTCGTGTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTGGAGGC 12299 || |||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 19506501 GA-GAGCCCGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGC 19506443 Query 12300 CGAGTTCGGTCTGCTCATCAACGACGTGGAAGCGTTCGTCAAGCTCACCAAC-------- 12351 |||| || | | | |||||||| || ||||||||| || |||||| Sbjct 19506442 TGAGTACGCGTTCCACTGCAACGACGCCGAGGCGTTCGTCGCTCTGACCAACGTGGTCAG 19506383 Query 12352 ----------GCCTGAGCCTGACTTGACATCGCACGGCGGGGGGCCCTTC-GGGGCCCCC 12400 | |||||||| |||||||||| ||| ||||||| ||| | | |||| Sbjct 19506382 CGGCGGCGAGGGCTGAGCCTAACTTGACATCCACCGGGAGGGGGCCGTTCACGCGGCCCC 19506323 Query 12401 TGCCAAG-----CGGAAAGGGCCGCATGAAGATTCGCAACAAGGACAACGGCGGCGTAGC 12455 | || | | || ||| | |||| ||| | || | |||||| || | || Sbjct 19506322 TTCCTGGGGTGTCTGAGAGGACTTCATGCGGATCCAATCCACCGTCAACGGTGGGTTCGC 19506263 Query 12456 CGAGGTCACCGAGGACTACGGCAAGGCCCTGATCGAGCTGGGCCGCTGGGAGC 12508 |||||| |||| || |||| | || |||||||| | ||| | ||| ||| Sbjct 19506262 GGAGGTCTCCGACGAGTACGCCCAGCGCCTGATCGCGGCTGGCGGTTGGAAGC 19506210 >seq18 Length=36757632 Score = 610 bits (676), Expect = 2e-170 Identities = 672/895 (75%), Gaps = 57/895 (6%) Strand=Plus/Plus Query 33770 CGAGAACCGGATGCGCCGGTAGAAGTACTTGGCGAAGATCGGGTGGATACCCTCACTGAC 33829 ||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| Sbjct 22717071 CGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACTGAC 22717130 Query 33830 GCCAGGCATCTTCGCGATGGTCCCGGTGGGGGCCACCGTCCGGGTCTTGACCGGAACCGG 33889 ||||||||||||||||||||||| || ||||||||||| || |||||||||| ||||| Sbjct 22717131 TCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCACCGG 22717190 Query 33890 GATTCGCAGCTCGTGGCTGAACTGCTGTGCTGA-CTGCTCGACCTCCTTGGCGAGCTCTC 33948 ||| |||| ||| |||||||||| || || | ||| |||||||| ||| | ||| | Sbjct 22717191 GATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTG-TCGACCTCAGCGGCCATCTCCC 22717249 Query 33949 GCAGCGTCTTCCG-GAAGTGCTTGTCCAGAGGCGCTTTCGAGTACCTGCGGCCTGTCATG 34007 ||| | | | ||| ||||||| || || | ||| ||||| |||||||||| | Sbjct 22717250 GCAA-GAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAGG 22717308 Query 34008 GCCAGGTAGGACGCCACACCGAGGTGCCCGACGCCGATGCGTCGGTTGCGGTCCAGGACC 34067 |||| ||||| ||||| ||||||||||| || |||||||| |||||||| ||||| ||| Sbjct 22717309 GCCAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAACC 22717368 Query 34068 TCCCGTGACTTCGGATCACCGACCGGGCTGAACGTCGCCCGAATCAGGAACCGAGCCATC 34127 || || |||||||||| |||||| |||||||||||| ||||||||||| | |||| Sbjct 22717369 TCTCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCATC 22717428 Query 34128 AGCCGGTGCGACCGGATCAGGTCGATGGTGTCGACCTTCCCGTTGTCCTTGACGAACGCC 34187 || ||||| | ||||||||||||||| |||| ||||||| ||| ||||||||||| Sbjct 22717429 AGACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGGCGTCGGTGACGAACGCC 22717488 Query 34188 GCGAGGTTGATGTGGCCGAGGTTGCACGGCTCCCACTCCTGCAGCGTGATCTCACCGCAG 34247 |||||||||||||| || |||||||| ||||||||| || |||||||||||| ||||| Sbjct 22717489 GCGAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCCGCAC 22717548 Query 34248 GGGTTGGTGCAGACGACCTCGTTGGGCTCGCCCTGGTTCGACAGGGACGAGTCCCAGAAC 34307 ||||||||||||||||||||||||||||| || ||| |||||| |||||| | | Sbjct 22717549 GGGTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCACATC 22717608 Query 34308 CCCGGCTCGCCGTTGGCGACCATGCCGTCCGTGATCCACTTCAGGGCCTTGTGGGCCTGA 34367 ||||||||||||||| || || || | || |||||| || ||| |||| Sbjct 22717609 CCCGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGCCT-- 22717666 Query 34368 TCGCGGACCATGATGGACACCTGGTTCGGCATG----TT--CAACGCCGTCCAGAACAGG 34421 ||| ||| | | || || ||| || | || | | || |||||||| Sbjct 22717667 TCGTGGAGC--GCGGGTTGAGCGGGTCGACAGGAGCCTTGGCCAGGC--TCCAGAACGCA 22717722 Query 34422 TCGTCCACGACGACCGAGATGTTGGTCGTCCAG---------------TGCTTG------ 34460 |||||||| ||||||||||||| || |||||| |||||| Sbjct 22717723 TCGTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATGTTG 22717782 Query 34461 --------------------CCGGTCTCCTGCTTGCAGCGGACGAACTCCTCGATCTGAG 34500 ||| | ||||||||| | | |||| |||| ||| Sbjct 22717783 GTGAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCTGCC 22717842 Query 34501 GGTCCTGCCAGTGCATCATCGACATGCGAGCCGACCGGCGAACACCGCCGGCCACCACAC 34560 |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 22717843 AGTCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCACAC 22717902 Query 34561 ACTGCGCGATGGCGTGGTCGATCTCCATCGCTGCGATCCCGTTGAGAGAGCCACC 34615 ||||||||||||||||||||||||||||||| ||| ||| | || | ||||| Sbjct 22717903 ACTGCGCGATGGCGTGGTCGATCTCCATCGCATCGAGACCGGTCAGCGCACCACC 22717957 Score = 185 bits (204), Expect = 3e-42 Identities = 456/681 (67%), Gaps = 42/681 (6%) Strand=Plus/Plus Query 42365 GAACTTCTCGGTGATGGCTTCCTTCGTCCAGTCCGTGAGGTTGTAGGGGTACGT------ 42418 ||||| ||||||||||||||| |||||| | ||| |||| |||||| | || Sbjct 22718115 GAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGGCTT 22718174 Query 42419 ---TGCCTTGCCCGACTGGCCCATCC---AGTAGTCGCCCAGCTCGGGCGGCTCGATGCC 42472 |||||||||| || |||| | |||||||||| || || | ||||| || Sbjct 22718175 CGGTGCCTTGCCCTTCTTCCCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACC 22718234 Query 42473 GTAC-TCCTCGGCCAGGGCCACGGCGTACACGGCGAGCTGGAAGTCGTCACCGGGCTGCT 42531 ||| || ||| | | || | ||||||||| ||||||||||||||||||| || || | Sbjct 22718235 GTAGGTCATCG-CGACCGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGT 22718293 Query 42532 TGCCCGTCTTGTGGTCGCGGACGATCAACCCTTCGTCGGTCTCGATCACAGCGTCGATAA 42591 | || ||||||| ||| ||||| | | | ||||| | ||| || |||||||| Sbjct 22718294 TCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGATGT 22718353 Query 42592 AGCCACGAACAAGCACACCGTCAAGATCAATGTCGAAGCCAAGTTCAATACCAGGCGTGC 42651 | || ||||| || | ||||| || || || |||||| || || || | ||||| | Sbjct 22718354 ATCCGCGAACCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTAC 22718413 Query 42652 CATCGGGTGCAATCCAGATCACCT-CCTCGGTGTGTGAAGTCGCCCAGTCGATGTACTTG 42710 | || || | | ||||||| ||| | ||| || | | ||| ||| | |||| Sbjct 22718414 CGTCCGGGGTCACCCAGATCTCCTGGCCCGGAGTCT----CCCGCCACGCGAAGAACTTC 22718469 Query 42711 CCGACCTGCTCCAGGCCGATGTCGTACCGGCGTGCGATGTCAAGTCGCCCACC---GTAA 42767 |||||||||||||||||| | ||||||||| ||||||| |||| ||| ||| Sbjct 22718470 TCGACCTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTC---TCGCTGACCGTTGTAC 22718526 Query 42768 CGACC-GCTGGCGAACCAATACTCGAAGTTCGGCG--TGATCGCACACGCCGCGTTGATG 42824 |||| | || ||| ||||||||||||| | | ||| | | || | | Sbjct 22718527 GGACCAGACCACG-TCCACCACTCGAAGTTCGGGGTCTCCTCGGTGAAG--GCTCCAACG 22718583 Query 42825 TACTTCTGATAGGACTCCCGGAAGACCGCCTGAGCGGCCTCCAGAGACATCGTGCGCCCG 42884 | || ||| | ||||| | ||| || | || || | || || ||| Sbjct 22718584 TCGTTGGCGTAGTGCCAACGGAACATGTCCTTGGCCTCGTCAAGCGTCAGCGGCATGCCG 22718643 Query 42885 CTGCGCTCCCAAGCCTCTATGGCCT---------CGTGGACCGCGCTCCCCTGCGCCGTC 42935 | |||||| |||| | |||| |||||| ||| ||||||||| | | Sbjct 22718644 TAGGACTCCCATACCTCGACCGCCTCAGCGACAGCGTGGAACGCAGTCCCCTGCGGCAGC 22718703 Query 42936 CAGGCCGCAGGGCGCTGCCACGCCTTGTCGAGGCGCGAGAGCTTGTA-GCTGTAGGGGCA 42994 |||||||| || ||||||||| ||||||||| || | ||||||||| || | ||||| Sbjct 22718704 CAGGCCGCTGGCCGCTGCCACACCTTGTCGATCCGAGCGAGCTTGTACGCCAT-CGGGCA 22718762 Query 42995 CTTCTCGTACTGCTTGAGCTG 43015 |||| |||||| |||| ||| Sbjct 22718763 CTTCGTGTACTGGTTGATCTG 22718783 >seq9 Length=46179939 Score = 185 bits (204), Expect = 3e-42 Identities = 456/681 (67%), Gaps = 42/681 (6%) Strand=Plus/Minus Query 42365 GAACTTCTCGGTGATGGCTTCCTTCGTCCAGTCCGTGAGGTTGTAGGGGTACGT------ 42418 ||||| ||||||||||||||| |||||| | ||| |||| |||||| | || Sbjct 16532229 GAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGGCTT 16532170 Query 42419 ---TGCCTTGCCCGACTGGCCCATCC---AGTAGTCGCCCAGCTCGGGCGGCTCGATGCC 42472 |||||||||| || |||| | |||||||||| || || | ||||| || Sbjct 16532169 CGGTGCCTTGCCCTTCTTCCCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACC 16532110 Query 42473 GTAC-TCCTCGGCCAGGGCCACGGCGTACACGGCGAGCTGGAAGTCGTCACCGGGCTGCT 42531 ||| || ||| | | || | ||||||||| ||||||||||||||||||| || || | Sbjct 16532109 GTAGGTCATCG-CGACCGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGT 16532051 Query 42532 TGCCCGTCTTGTGGTCGCGGACGATCAACCCTTCGTCGGTCTCGATCACAGCGTCGATAA 42591 | || ||||||| ||| ||||| | | | ||||| | ||| || |||||||| Sbjct 16532050 TCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGATGT 16531991 Query 42592 AGCCACGAACAAGCACACCGTCAAGATCAATGTCGAAGCCAAGTTCAATACCAGGCGTGC 42651 | || ||||| || | ||||| || || || |||||| || || || | ||||| | Sbjct 16531990 ATCCGCGAACCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTAC 16531931 Query 42652 CATCGGGTGCAATCCAGATCACCT-CCTCGGTGTGTGAAGTCGCCCAGTCGATGTACTTG 42710 | || || | | ||||||| ||| | ||| || | | ||| ||| | |||| Sbjct 16531930 CGTCCGGGGTCACCCAGATCTCCTGGCCCGGAGTCT----CCCGCCACGCGAAGAACTTC 16531875 Query 42711 CCGACCTGCTCCAGGCCGATGTCGTACCGGCGTGCGATGTCAAGTCGCCCACC---GTAA 42767 |||||||||||||||||| | ||||||||| ||||||| |||| ||| ||| Sbjct 16531874 TCGACCTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTC---TCGCTGACCGTTGTAC 16531818 Query 42768 CGACC-GCTGGCGAACCAATACTCGAAGTTCGGCG--TGATCGCACACGCCGCGTTGATG 42824 |||| | || ||| ||||||||||||| | | ||| | | || | | Sbjct 16531817 GGACCAGACCACG-TCCACCACTCGAAGTTCGGGGTCTCCTCGGTGAAG--GCTCCAACG 16531761 Query 42825 TACTTCTGATAGGACTCCCGGAAGACCGCCTGAGCGGCCTCCAGAGACATCGTGCGCCCG 42884 | || ||| | ||||| | ||| || | || || | || || ||| Sbjct 16531760 TCGTTGGCGTAGTGCCAACGGAACATGTCCTTGGCCTCGTCAAGCGTCAGCGGCATGCCG 16531701 Query 42885 CTGCGCTCCCAAGCCTCTATGGCCT---------CGTGGACCGCGCTCCCCTGCGCCGTC 42935 | |||||| |||| | |||| |||||| ||| ||||||||| | | Sbjct 16531700 TAGGACTCCCATACCTCGACCGCCTCAGCGACAGCGTGGAACGCAGTCCCCTGCGGCAGC 16531641 Query 42936 CAGGCCGCAGGGCGCTGCCACGCCTTGTCGAGGCGCGAGAGCTTGTA-GCTGTAGGGGCA 42994 |||||||| || ||||||||| ||||||||| || | ||||||||| || | ||||| Sbjct 16531640 CAGGCCGCTGGCCGCTGCCACACCTTGTCGATCCGAGCGAGCTTGTACGCCAT-CGGGCA 16531582 Query 42995 CTTCTCGTACTGCTTGAGCTG 43015 |||| |||||| |||| ||| Sbjct 16531581 CTTCGTGTACTGGTTGATCTG 16531561 >seq1 Length=46747018 Score = 102 bits (112), Expect = 3e-17 Identities = 247/367 (67%), Gaps = 14/367 (4%) Strand=Plus/Minus Query 512 GACTGGGAAGAGAACTACCGGCAGCCCGTGCTCGAAGCAGCGGGCTACCAGTGTCAGATT 571 |||||||| ||| ||||||| || || || || || || | | |||| || | Sbjct 34905268 GACTGGGAGCTGAATTACCGGCTCCCGGTCCTTTCTGCTGCCGGGTGGCTGTGTGAGGTC 34905209 Query 572 CAGGGTCCCGGTTGCCTCAGGAAGGCAACCGATGTTGACCACATCAGGCGCGGCGACGAC 631 | || ||||| ||| || || || ||||| || ||||||| | || || ||||| Sbjct 34905208 GACGGCCCCGGCTGCGTCCGGGCTGCCACCGACGTAGACCACAAGAAGCCAGGGAACGAC 34905149 Query 632 CACAGTCGCCG--CAATCTCCAGGCAGCGTGCAACCG---CTGCCACGGCAGAAAGTCAT 686 ||| |||| | ||| || || |||| | ||| ||||||||||| |||||| Sbjct 34905148 CAC--TCGCGGTCCAACCTGCA---AGCGATCTGCCGTGTCTGCCACGGCAAGAAGTCAG 34905094 Query 687 CCGCAGAAGGCCACGCCCGCAAGCGGCAGTTACGAGCAATGAGGAGGCGACCTATCGAGC 746 |||| || ||| ||||| |||| | | || ||||| |||||| | | Sbjct 34905093 CCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGGAGGAAGCGACCAGAACAAC 34905034 Query 747 GCCATCCCGGCTCTCGGT-AGCGGGCCAGGTGCCCGCTTTTCACCCAGGAGGTGTCAAGT 805 |||| || || ||| | ||||||||||||||| || | ||||||||||||| | || Sbjct 34905033 GCCACCCTGGGCGTCGTTAAGCGGGCCAGGTGCCTGC--TCCACCCAGGAGGTGAC-TGT 34904977 Query 806 GGGCGAAAGAGGCCCTATCGGTAAGCGATCGGATCAGCGCGTCCGACGCAACAAGACAGA 865 |||| | | ||||| ||||| || || || | ||||| || ||||||| | || Sbjct 34904976 GGGCACACGCGGCCCCATCGGAAAACGCGACGAAGAACGCGTTCGTCGCAACACCCCGGA 34904917 Query 866 CAACCCG 872 |||||| Sbjct 34904916 GAACCCG 34904910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163875722226944