Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15]
1,376 sequences; 930,507,853 total letters
Query= NC_023581.1
Length=77792
Score E
Sequences producing significant alignments: (Bits) Value
seq82 127 1e-24
>seq82
Length=657493
Score = 127 bits (140), Expect = 1e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 37924 ATTGCCACCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCA 37983
||| ||||||||||||| ||| || ||||| | ||| || |||| |||| |||||
Sbjct 104988 ATTACCACCTTGTCATATATTATTTCAGTTTTATGTTTTTAACAAAAAATTAAGTTGTCA 105047
Query 37984 GTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGC 38043
| || |||||| | |||| | || | || | || |||||||| || || |||||
Sbjct 105048 ACTTTACCAACGTTCTTGTGATGTATTTCTTGGATTACCTTTTAATATAGCTAGTTATGC 105107
Query 38044 GTTGCTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGGAC 38103
| |||| ||||| |||| | |||||| ||||||||||| |||||| | |||||
Sbjct 105108 AATACTTATTCATATGATAGCACAACAATGTGATTTAGAAGTTGGAGAATTTTTATGGAC 105167
Query 38104 TGGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGCAAGCTAAAAAACAATTA 38158
|| |||| || || || || | ||||||| |||| ||| ||||||||| ||
Sbjct 105168 AGGAGGTGATGTCCATCTATATAATAATCACATTGAATTAGCAAAAAAACAAGTA 105222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 248805427463008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |