Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_023604.1 Length=44306 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 3e-15 >seq9 Length=46179939 Score = 95.1 bits (104), Expect = 3e-15 Identities = 110/146 (75%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 28817 CGCTCGGCGCTCGACGAACTCTCCGACTCGAAGCTGTTGCGGATCGCGGCGAAGGTGATC 28876 ||| ||||||||||||| || ||||| ||||||||| | ||||| |||| | ||| Sbjct 27699262 CGCGCGGCGCTCGACGACCTGTCCGATTCGAAGCTGCTCAACATCGCCGCGACCATCATC 27699203 Query 28877 GCCGGCTGGCGCCCGCTGCTGGTGCGCGACCACGTGGCCGCGCTGACCGACGTCGACTTG 28936 ||||||||| ||| | ||| | | |||||| | || ||||||||||||||| | Sbjct 27699202 GCCGGCTGGAAACCGATTCTGCT-CAAGACCAC--CGGCGATCTGACCGACGTCGACGTC 27699146 Query 28937 CTGATCGAAGTGCTTCGCGATCGCGC 28962 ||| |||| | || ||||||||||| Sbjct 27699145 CTGGTCGACGCTCTGCGCGATCGCGC 27699120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141655285314816