Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15]
1,376 sequences; 930,507,853 total letters
Query= NC_023709.1
Length=51308
Score E
Sequences producing significant alignments: (Bits) Value
seq8 847 0.0
seq18 623 3e-174
seq9 179 1e-40
seq1 118 3e-22
>seq8
Length=24646021
Score = 847 bits (938), Expect = 0.0
Identities = 1567/2262 (69%), Gaps = 124/2262 (5%)
Strand=Plus/Minus
Query 10399 GTCGAGAACGCCGGTCGGAAGCAGATCATCCGGGCAGTCGAAGACGACTCGGAGAC-CGG 10457
|| |||| || ||||| ||||||||| | || ||| | ||||| | | | | |
Sbjct 19508431 GTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACCCAGCTCCTCAG 19508372
Query 10458 AACGGTCAAGGGCTGGGCCCGAGTAGCGACCGGTCGAGAGACCTGCGCCTGGTGTCTGAT 10517
| || | ||||||||||| | || || ||||| || || || |||||||||||||||||
Sbjct 19508371 ATCG-TGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCTGAT 19508313
Query 10518 GCTGATCTCGCGGGGCCCCGTGTATTCCTCTGCGGAGAACGCGGGTTTGGACCTCGATGA 10577
|||||| || || ||||||| ||| || ||||| | || |||| | |||||||
Sbjct 19508312 GCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGACAC 19508253
Query 10578 CGAGTCAGCAGCACAACTGTTCCGCGACAGCGGCGGTGACCTCAAGAAGCTCGCCGCCTA 10637
|||| | | | | || | ||| ||| | || || ||||| ||
Sbjct 19508252 CGAGACCGTGGTCGACCTCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTC-------- 19508201
Query 10638 CGTCGATGAGAACGAGCTG---ATGAAGGAGTGGCACACCGGCTGCGACTGCAAGGTGGT 10694
|| ||| |||| | ||| || ||||||||||| | || ||||||||| ||||||
Sbjct 19508200 CG-CGAAGAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGT 19508142
Query 10695 GCCGGTCTACAACAGGGCCAGTTGGCCCGGACGGGACGCCTACAAGCGTGCCGAGAAGTG 10754
||| |||| | || || | ||||||||| || ||| | | || || | ||
Sbjct 19508141 GCCTGTCTTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCT 19508082
Query 10755 GTGGATCGAAGCCACGAAGGAGGCCCGTCGCCTCATCGACTCGGGAGAGGCGAGGAGCGA 10814
|||||||| || ||| || ||| | | ||||| | || || |||| | | |
Sbjct 19508081 CTGGATCGACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAA 19508022
Query 10815 CAACCTCAACAAGGAAGCGCAGAACGCGCTTCGCCGTCGTCTCGAACGAGGCGACCTTTC 10874
||| |||||||| || ||||| || || || || | | || ||||| | |
Sbjct 19508021 AAACGAGAACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCGAGTTCGC 19507962
Query 10875 CATGACGAGATTCGCCCTCGCGGCGTAACTCAACACCACGACCCCCTGGTGGGGTC--CA 10932
||| | | ||| ||||| |||||| || || ||| |||| |||||| || ||
Sbjct 19507961 AATGTCCGACTACGCACTCGCTGCGTAA-TC----CCCCGAACCCCAGGTGGGTTCATCA 19507907
Query 10933 ACCATGCCCAGGAGGC--AAACAGTATGGCTGACAACGACACTCAGACCCCCGACACCAC 10990
|||||||||||||||| ||||| ||| | |||| || ||| ||| | ||| |
Sbjct 19507906 ACCATGCCCAGGAGGCGAAAACAC-ATGTCCGACACCGTAACT---ACCGAAGGCACTCC 19507851
Query 10991 GACGGGCGACAA-----CGAAGG-CACCGACGCGGGTCAGGCACCCGGCGCTCCGGAGAC 11044
| | |||||| || || ||| ||| | | || ||| ||||| ||||
Sbjct 19507850 GGCCGGCGACCCGACCCCGGTGGTCACTGACAAGCCGCTGGAACCGA---CTCCGAAGAC 19507794
Query 11045 CTTCAGCCGGGAGTACGTCGAGGAACTGAGGCGTGAGAACGCCAAGGCACGCACCTCGAA 11104
|| | | || |||||| |||| || | | ||| ||| || || | ||
Sbjct 19507793 CTACGACGAGGCATACGTCAAGGAGCTTCGCCAGGAGGCCGCTGCTGCTCGGGTTGCCAA 19507734
Query 11105 GAACCAAGCGGTCGAAGACGC---CAAGGCAGAAGTCCGCAAGGAGTACGAGGCCAAGCT 11161
||| | || ||||||| ||| |||||| | | || | | || ||| | ||
Sbjct 19507733 GAAGGACGCAGTCGAAGCCGCAGTCAAGGCGGC-GAACG--ACGCTCACACCGCCGAACT 19507677
Query 11162 GGCTGAGAAGGACACGGCATACACCGAGCTGCAGAACCAGCTCGGGCAGGCGTGGATTGA 11221
|||| ||||| | |||||||||| ||||| |||| || ||||| |||||
Sbjct 19507676 CGCTGCTCGCGACACTCGAATCACCGAGCTGGAGAACGAGCTGGGACAGGCTTGGATCCG 19507617
Query 11222 GCTCGAAAAGGTCTACACGGCCGTCGATGCCAAGGTCCCATCCGACCGCGTCCGCGCTTT 11281
||| | ||| | | || | | | || ||||| || |||| || | ||| ||
Sbjct 19507616 GCTGCAGAAGCTGGAGACCTCGCTTGCCGCAAAGGTTCCCAGCGACAAGGTGCTCGCGTT 19507557
Query 11282 CGCCGAGATTCTCAAGGGCGAAGACCCCGATGCCATCAAGGCGTCGGCTGAGTC-AGCCA 11340
|| || || | ||||||| ||| | || | ||| | ||| || || | ||
Sbjct 19507556 CGTTGACATCTTGCAGGGCGAGGACGCTGACTCGATCGCCGAGTCCGCGAAGAAGAACCT 19507497
Query 11341 AGCAACTGTTCGGCGGCAT-GACGGGCA-CCG--TCCCGGCCGTCGATCCCACCCAGGGC 11396
| ||||| ||||||| | ||| | | ||| | |||| |||| ||||||||||||
Sbjct 19507496 CG-AACTGATCGGCGGTTTCGACAAGAAGCCGGTTTCCGGTT-TCGACCCCACCCAGGGC 19507439
Query 11397 TCTGGTGGT-GGCAAGCACACGCCGCTCAACGGAGACCCGATCCTCGACGCCATCAAGAA 11455
| |||||| |||| | || |||||||||||| |||||||||||| ||||||| |||
Sbjct 19507438 TTCGGTGGTCGGCAGGAACT-GCCGCTCAACGGTGACCCGATCCTCAACGCCATGAAG-- 19507382
Query 11456 GGCCGTCGGGGCGTAA-------TC---------CCCACTAC--GACAAGGAAGTAACCA 11497
||| || ||| | | || |||| | | |||||||| | | ||
Sbjct 19507381 GGCGTTCTCGGCATCAAGTGATGTCGAGCTGAAACCCATTCCTAGACAAGGAGATTAGCA 19507322
Query 11498 ATCATGGCAGCAGGAACCACGTTCCCGGTCAACCACGCGCAGATCGCGCAGACCGGCGAC 11557
||||| ||||| || | ||| | || | ||||| |||||||| |||||||||||
Sbjct 19507321 G--ATGGCCGCAGGCACTGCTTTCGCAGTTGATCACGCTCAGATCGCCCAGACCGGCGAT 19507264
Query 11558 TCCATGTTCAAGGGCTACCTGGAGCCCGAGCAGGCCCAGGACTACTTCGCGGAAGCGGAG 11617
|||||||||||||||||||||||||||||||||| |||| |||||||| || || |||
Sbjct 19507263 ACCATGTTCAAGGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAG 19507204
Query 11618 AAGACCTCCATCGTCCAGCGTGTCGCTCGGAAGATTCCGATGGGATCGACCGGCGTGAAG 11677
|||||||| |||||||||| |||| | |||| | |||||||| | || ||| ||||
Sbjct 19507203 AAGACCTCGATCGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAG 19507144
Query 11678 ATTCCGCACTGGACCGGCGACGTTGCCGCCGCGTGGGTGGGCGAAGGCGACATGAAGCCC 11737
|| ||||||||| ||||||||| ||| |||| | || || || ||||||||||||
Sbjct 19507143 ATCCCGCACTGGGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCC 19507084
Query 11738 ATCACCAAGGGCGACATGAGCGTTCAGCAGG---TCGAGCCGCACAAGATCGCCACGATC 11794
|||||||||||| |||||| ||| |||| ||| ||| ||||||||||| ||||||
Sbjct 19507083 ATCACCAAGGGCAACATGAC--TTC-GCAGACCATCGCGCCCCACAAGATCGCGACGATC 19507027
Query 11795 TTCATCGCCTCGGCTGAAACCGTTCGTGCGAACCCGGCCAACTACCTGGGCACCATGCGG 11854
||| | || || || || ||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct 19507026 TTCGTGGCGTCTGCGGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGT 19506967
Query 11855 GTCAAGGTCGGCACCGCCATCGCGATGGCCTTCGACGAGGCCGCTCTGCACGGCACCGAC 11914
|||||| | |||||| |||||||||| ||||||| || || ||||||||||||||
Sbjct 19506966 ACCAAGGTGGCGACCGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGAC 19506907
Query 11915 AGCCCGTT--CGACCAGTTCGTGGATCAGACCACGAAGGCCGTCGACATCACCCCGGCCG 11972
|||||||| ||||| | | | | ||||||||| |||||| || || | | |
Sbjct 19506906 AGCCCGTTCCCGACC--TACATCGGTCAGACCACCAAGGCCATCTCGAT--TGCTGACAC 19506851
Query 11973 CGCCG--GCCACCACC---TACGACGCCATCGGCGTCAACGCGCTGTCGCTGCTCGTCAA 12027
| ||| ||||| ||| |||||| | | ||| |||| ||| ||||| || ||
Sbjct 19506850 CACCGGTGCCACGACCGTGTACGACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGTGAA 19506791
Query 12028 CGACGGCAAGAAGTGGCAGGCGACCCTGCTCGATGACATCGCTGAGCCCGTGCTCAACGG 12087
|||||||||||||||| ||||| || || |||||| | ||||| | || |||||
Sbjct 19506790 CGACGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAACGG 19506731
Query 12088 TGCCAAGGACGCGAACGGCCGTCCGCTGTTCGTGGAGAGCACCTACGAGGGTCTGACCAC 12147
|| |||||| |||||| || ||||||||| | ||| |||||| ||| | || |
Sbjct 19506730 CGCGAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTAC---GGTGAGGCCGC 19506674
Query 12148 G---CCGTACCGCGAGGGCCGCATCCTGGGCCGTACCACGATCCTGAGCGACCACGTCGC 12204
| |||| ||| |||||| ||| | | |||| | || ||||| |||||||||||||
Sbjct 19506673 GAGCCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGT 19506614
Query 12205 CAACGGCACCACGGTCGGCTACCAGGGCGACTTCACCCAGATCGTCTGGGGCCAGGTCGG 12264
| |||||||||||||||| | ||| |||||| ||||| || ||||||||||| ||||
Sbjct 19506613 GGAGGGCACCACGGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGCCAGATCGG 19506554
Query 12265 CGGTCTGTCCTTCGACGTGACGGACCAGGCCACGCTGAACCTGGGCACTCCCGAAGAGCC 12324
|||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||
Sbjct 19506553 CGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTCG-AGAGCC 19506495
Query 12325 C-AAGTTCGTGTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTGGAGGCCGAGTTCG 12383
| || ||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||
Sbjct 19506494 CGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGCTGAGTACG 19506435
Query 12384 GTCTGCTCATCAACGACGTGGAAGCGTTCGTCAAGCTCACCAAC---------------- 12427
| | | |||||||| || ||||||||| || ||||||
Sbjct 19506434 CGTTCCACTGCAACGACGCCGAGGCGTTCGTCGCTCTGACCAACGTGGTCAGCGGCGGCG 19506375
Query 12428 --GCCTGAGCCTGACTTGACATCGCACGGCGGGGGGCCCTTC-GGGGCCCCCTGCCAAG- 12483
| |||||||| |||||||||| ||| ||||||| ||| | | ||||| || |
Sbjct 19506374 AGGGCTGAGCCTAACTTGACATCCACCGGGAGGGGGCCGTTCACGCGGCCCCTTCCTGGG 19506315
Query 12484 ----CGGAAAGGGCTGCATGAAGATTCGCAACAAGGCCAACGGCGGCGTAGCCGAGGTCA 12539
| || ||| || |||| ||| | || | |||||| || | || ||||||
Sbjct 19506314 GTGTCTGAGAGGACTTCATGCGGATCCAATCCACCGTCAACGGTGGGTTCGCGGAGGTCT 19506255
Query 12540 CTGAGGACTACG-GCACCGCCCTGATCGCGGGCGGGGGCTGG 12580
| || || |||| || || ||||||||||| || || |||
Sbjct 19506254 CCGACGAGTACGCCCAGCG-CCTGATCGCGGCTGGCGGTTGG 19506214
>seq18
Length=36757632
Score = 623 bits (690), Expect = 3e-174
Identities = 654/863 (76%), Gaps = 59/863 (7%)
Strand=Plus/Plus
Query 33887 CGAGAACCGGATGCGCCGGTTGAAGTACTTGGCGAAGATCGGGTGGATACCCTCACTGAC 33946
||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct 22717071 CGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACTGAC 22717130
Query 33947 ACCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTCCGGGTTTTGACTGGCACCGG 34006
|||||||||||||||||||||||||||||||||||||| || | ||||| ||||||||
Sbjct 22717131 TCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCACCGG 22717190
Query 34007 GATACGCAGCTCGTGGCTGAACTGCTGTGCCGCGTGCTGGACCTCGTCGGCCAGCTCTCG 34066
||| |||| ||| |||||||||| || ||||| | |||||| |||||| ||| ||
Sbjct 22717191 GATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTCCCG 22717250
Query 34067 GAGCATCTTCCGGAAGTGCTTGTCCAGAGGCGCTTTCGAGTACTTCCGACCCGTCATCGC 34126
| | ||| ||||||| || || | ||| ||| | || || |||| ||
Sbjct 22717251 CAAGAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAGGGC 22717310
Query 34127 CAGGTAGGACGCCACACCGAGATGCCCGACGCCGATGCGTCGGTTCCGGTCCAGGACCTC 34186
|| ||||| ||||| ||||| ||||| || |||||||| ||||| || ||||| |||||
Sbjct 22717311 CAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAACCTC 22717370
Query 34187 CCGTGACTTCGGATCACCGACCGGGCTGAACGTCGCCCGGATCAGGAACCGTGCCATCAG 34246
|| |||||||||| |||||| |||||||||||||||||||||||| | ||||||
Sbjct 22717371 TCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCATCAG 22717430
Query 34247 CCTGTGCGACCGGATCAGGTCGATGGTGTCGACCTTCCCGTTGTCCTTGACGAACGCCGC 34306
| ||| | ||||||||||||||| |||| ||||||| ||| |||||||||||||
Sbjct 22717431 ACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGGCGTCGGTGACGAACGCCGC 22717490
Query 34307 CAGGTTGATGTGGCCGAGATTGCAGGGCTCCCACTCCTGCAGCGTGATCTCACCGCAGGG 34366
||||||||||| || || ||||||||||||||| || |||||||||||| ||||| ||
Sbjct 22717491 GAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCCGCACGG 22717550
Query 34367 GTTGGTGCAGACGACCTCGTTGGGCTCTCCGACGTTGGACAGGCTCGAGTCCCAGAACCC 34426
||||||||||||||||||||||||||| ||||||||||||||||| |||||| | |||
Sbjct 22717551 GTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCACATCCC 22717610
Query 34427 AGGCTCGCCGTTGGCGACCATGCCCTCCGTGATGGCCTTCAGCAC---GT---------T 34474
|||||||||||| || ||||| | || ||||||||||| || |
Sbjct 22717611 CGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGCCTTCGT 22717670
Query 34475 GGAG-GCGTG----CCGCCCCGGCA-TCGTCTTGACCTGCTGCCAGAACTTCGCGTCGAC 34528
|||| ||| | || || || | |||| || | ||||||| |||| ||
Sbjct 22717671 GGAGCGCGGGTTGAGCGGGTCGACAGGAGCCTTGGCCAGGCTCCAGAACGCATCGTCCAC 22717730
Query 34529 CTCGACCGAGATGTTCGTCGTCCAGTGCTTCCCGGTCTCCGACTTGCAGTTGATGA---- 34584
|||||||||||||||||| |||||||| ||| | ||| |||| |||| |||
Sbjct 22717731 CTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGT 22717790
Query 34585 ----AGCG-GA--AGATGTCCT----------------CGTCT--------------TCC 34607
|| | || | |||||| ||||| ||
Sbjct 22717791 CTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCTGCCAGTCCGCC 22717850
Query 34608 CAGTGCATCATCGACATGCGAGCCGACCGGCGAACACCGCCGGCCACCACACACTGCGCG 34667
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 22717851 CAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCACACACTGCGCG 22717910
Query 34668 ATGGCGTGGTCGATCTCCATCGC 34690
|||||||||||||||||||||||
Sbjct 22717911 ATGGCGTGGTCGATCTCCATCGC 22717933
Score = 179 bits (198), Expect = 1e-40
Identities = 450/677 (66%), Gaps = 34/677 (5%)
Strand=Plus/Plus
Query 42781 GAACTTCTCGGTGATGGCTTCCTTCGTCCAGTCGGTCAGGACATACGGGTACGTCG---- 42836
||||| ||||||||||||||| |||||| | |||||| | || || | ||||
Sbjct 22718115 GAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGGCTT 22718174
Query 42837 -----CCTTGCCCGACTGACCCATCC---AGTAGTCACCAAGCCTCGGCGGCTCGATACC 42888
|||||||| || |||| | ||||||| || | |||| | ||||| |||
Sbjct 22718175 CGGTGCCTTGCCCTTCTTCCCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACC 22718234
Query 42889 GAACTGCTCGGCCAGGGCCACGGCATACACCGCGAGCTGGAAGTCGTCACCCGGCTGCTT 42948
| | | || | || | || ||||| |||||||||||||||||||||| || ||
Sbjct 22718235 GTAGGTCATCGCGACCGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTT 22718294
Query 42949 GCCCGTCTTGTGGTCCCGGACCAGCAGGCCATCGTCGGTCTCGACCACGGCGTCGATGTA 43008
|| ||||||| ||||||||| | || | ||||| | |||| ||||||||||||||
Sbjct 22718295 CCCGGTCTTGTAGTCCCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGATGTA 22718354
Query 43009 GCCGCGAACCAAGACTCCGTCGAGGTCGATGTCGAACCCGAGCTCGATGCCCGGTGTCCC 43068
|||||||||| || |||||||| ||||| ||||| |||||||| | || || ||
Sbjct 22718355 TCCGCGAACCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACC 22718414
Query 43069 GTCCGGGGCGATCCAGATGACCTCTTCGGTGTGCGAGGTTGC--CCAGTCGATGTACTTG 43126
|||||||| | |||||| ||| | | ||| | | ||| ||| | ||||
Sbjct 22718415 GTCCGGGGTCACCCAGATCTCCTGGCCCG-----GAGTCTCCCGCCACGCGAAGAACTTC 22718469
Query 43127 CCGACCTGCTCTAGGCCGATCTCGAATCGCCGTGCGATGTCAAGTCTTCCACCGTAACGA 43186
|||||||||| ||||||| | | || || ||||||| | || ||| ||
Sbjct 22718470 TCGACCTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGA 22718529
Query 43187 CC-GCTGGCGAACCAGTAGTCGAAGTTTGGCGTGATGGCGCACGAGGCGTTGATGTACTT 43245
|| | || ||| | |||||||| || || || |||| | || ||
Sbjct 22718530 CCAGACCACG-TCCACCACTCGAAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTCGTT 22718588
Query 43246 CTGGTACGACTCCCGGAACACGGCCTGAGCGGCCTCCAGAGACATCGTCCGACCGCTCCG 43305
||| | ||||||| | ||| || | || || | || || | |||
Sbjct 22718589 GGCGTAGTGCCAACGGAACATGTCCTTGGCCTCGTCAAGCGTCAGCGGCATGCCGTAGGA 22718648
Query 43306 CTCCCAAGCCTCTATGGCCT---------CGTGAACGGCGCTCCCCTG-GGCTGTCCAGG 43355
|||||| |||| | |||| |||| | || ||||||| ||| | |||||
Sbjct 22718649 CTCCCATACCTCGACCGCCTCAGCGACAGCGTGGAACGCAGTCCCCTGCGGCAG-CCAGG 22718707
Query 43356 CAGCGGGGCGCTGCCACGCCTTGTCGATGCGTGAGAGCTTGTA-GCTGTAGGGGCACTTC 43414
| || || ||||||||| |||||||||| || | ||||||||| || | |||||||||
Sbjct 22718708 CCGCTGGCCGCTGCCACACCTTGTCGATCCGAGCGAGCTTGTACGCCAT-CGGGCACTTC 22718766
Query 43415 TCGTACTGCTTGAGCTG 43431
|||||| |||| |||
Sbjct 22718767 GTGTACTGGTTGATCTG 22718783
>seq9
Length=46179939
Score = 179 bits (198), Expect = 1e-40
Identities = 450/677 (66%), Gaps = 34/677 (5%)
Strand=Plus/Minus
Query 42781 GAACTTCTCGGTGATGGCTTCCTTCGTCCAGTCGGTCAGGACATACGGGTACGTCG---- 42836
||||| ||||||||||||||| |||||| | |||||| | || || | ||||
Sbjct 16532229 GAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGGCTT 16532170
Query 42837 -----CCTTGCCCGACTGACCCATCC---AGTAGTCACCAAGCCTCGGCGGCTCGATACC 42888
|||||||| || |||| | ||||||| || | |||| | ||||| |||
Sbjct 16532169 CGGTGCCTTGCCCTTCTTCCCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACC 16532110
Query 42889 GAACTGCTCGGCCAGGGCCACGGCATACACCGCGAGCTGGAAGTCGTCACCCGGCTGCTT 42948
| | | || | || | || ||||| |||||||||||||||||||||| || ||
Sbjct 16532109 GTAGGTCATCGCGACCGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTT 16532050
Query 42949 GCCCGTCTTGTGGTCCCGGACCAGCAGGCCATCGTCGGTCTCGACCACGGCGTCGATGTA 43008
|| ||||||| ||||||||| | || | ||||| | |||| ||||||||||||||
Sbjct 16532049 CCCGGTCTTGTAGTCCCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGATGTA 16531990
Query 43009 GCCGCGAACCAAGACTCCGTCGAGGTCGATGTCGAACCCGAGCTCGATGCCCGGTGTCCC 43068
|||||||||| || |||||||| ||||| ||||| |||||||| | || || ||
Sbjct 16531989 TCCGCGAACCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACC 16531930
Query 43069 GTCCGGGGCGATCCAGATGACCTCTTCGGTGTGCGAGGTTGC--CCAGTCGATGTACTTG 43126
|||||||| | |||||| ||| | | ||| | | ||| ||| | ||||
Sbjct 16531929 GTCCGGGGTCACCCAGATCTCCTGGCCCG-----GAGTCTCCCGCCACGCGAAGAACTTC 16531875
Query 43127 CCGACCTGCTCTAGGCCGATCTCGAATCGCCGTGCGATGTCAAGTCTTCCACCGTAACGA 43186
|||||||||| ||||||| | | || || ||||||| | || ||| ||
Sbjct 16531874 TCGACCTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGA 16531815
Query 43187 CC-GCTGGCGAACCAGTAGTCGAAGTTTGGCGTGATGGCGCACGAGGCGTTGATGTACTT 43245
|| | || ||| | |||||||| || || || |||| | || ||
Sbjct 16531814 CCAGACCACG-TCCACCACTCGAAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTCGTT 16531756
Query 43246 CTGGTACGACTCCCGGAACACGGCCTGAGCGGCCTCCAGAGACATCGTCCGACCGCTCCG 43305
||| | ||||||| | ||| || | || || | || || | |||
Sbjct 16531755 GGCGTAGTGCCAACGGAACATGTCCTTGGCCTCGTCAAGCGTCAGCGGCATGCCGTAGGA 16531696
Query 43306 CTCCCAAGCCTCTATGGCCT---------CGTGAACGGCGCTCCCCTG-GGCTGTCCAGG 43355
|||||| |||| | |||| |||| | || ||||||| ||| | |||||
Sbjct 16531695 CTCCCATACCTCGACCGCCTCAGCGACAGCGTGGAACGCAGTCCCCTGCGGCAG-CCAGG 16531637
Query 43356 CAGCGGGGCGCTGCCACGCCTTGTCGATGCGTGAGAGCTTGTA-GCTGTAGGGGCACTTC 43414
| || || ||||||||| |||||||||| || | ||||||||| || | |||||||||
Sbjct 16531636 CCGCTGGCCGCTGCCACACCTTGTCGATCCGAGCGAGCTTGTACGCCAT-CGGGCACTTC 16531578
Query 43415 TCGTACTGCTTGAGCTG 43431
|||||| |||| |||
Sbjct 16531577 GTGTACTGGTTGATCTG 16531561
>seq1
Length=46747018
Score = 118 bits (130), Expect = 3e-22
Identities = 254/369 (69%), Gaps = 18/369 (5%)
Strand=Plus/Minus
Query 516 GACTGGGACGAGAACTACCGGCAGCCGGTGCTGGCAGCAGCCGGCCACCGGTGCCAGATT 575
|||||||| ||| ||||||| ||||| || | || ||||| | ||| || |
Sbjct 34905268 GACTGGGAGCTGAATTACCGGCTCCCGGTCCTTTCTGCTGCCGGGTGGCTGTGTGAGGT- 34905210
Query 576 CG--GGCTCGCGGTTGCCTCGGGAAGGCAACCGACGTGGACCACATCCGCAG--AGGCGA 631
|| ||| | ||| ||| || || || |||||||| ||||||| | || ||| |
Sbjct 34905209 CGACGGCCC-CGGCTGCGTCCGGGCTGCCACCGACGTAGACCACAA--GAAGCCAGGGAA 34905153
Query 632 CGACCACAGTCGCTCCAACCTGCAGGCAGCGTGCAACCG---CTGCCACGGCAAGAAGTC 688
||||||| || ||||||||||| |||| | ||| ||||||||||||||||||
Sbjct 34905152 CGACCACTCGCGGTCCAACCTGCA---AGCGATCTGCCGTGTCTGCCACGGCAAGAAGTC 34905096
Query 689 ATCCGCAGAAGGCCACGCCCGCAAGCGGCAGTTACGAGCAATGAGGAGGCGACCTATCGA 748
| |||| || ||| ||||| |||| | | || ||||| |||||| |
Sbjct 34905095 AGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGGAGGAAGCGACCAGAACA 34905036
Query 749 GCGCCATCCCGGCTCTCGGT-AGCGGGCCAGGTGCCCGCTTTTCACCCAGGAGGTGTCAA 807
||||| || || ||| | ||||||||||||||| || | ||||||||||||| |
Sbjct 34905035 ACGCCACCCTGGGCGTCGTTAAGCGGGCCAGGTGCCTGC--TCCACCCAGGAGGTGAC-T 34904979
Query 808 GTGGGCGAAAGAGGCCCCATCGCCAAGCGATCGGATCAGCGCGTCCGACGCAACAAGACA 867
|||||| | | |||||||||| || || || | ||||| || ||||||| |
Sbjct 34904978 GTGGGCACACGCGGCCCCATCGGAAAACGCGACGAAGAACGCGTTCGTCGCAACACCCCG 34904919
Query 868 GACAACCCG 876
|| ||||||
Sbjct 34904918 GAGAACCCG 34904910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164061319194240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |