Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_023709.1 Length=51308 Score E Sequences producing significant alignments: (Bits) Value seq8 847 0.0 seq18 623 3e-174 seq9 179 1e-40 seq1 118 3e-22 >seq8 Length=24646021 Score = 847 bits (938), Expect = 0.0 Identities = 1567/2262 (69%), Gaps = 124/2262 (5%) Strand=Plus/Minus Query 10399 GTCGAGAACGCCGGTCGGAAGCAGATCATCCGGGCAGTCGAAGACGACTCGGAGAC-CGG 10457 || |||| || ||||| ||||||||| | || ||| | ||||| | | | | | Sbjct 19508431 GTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACCCAGCTCCTCAG 19508372 Query 10458 AACGGTCAAGGGCTGGGCCCGAGTAGCGACCGGTCGAGAGACCTGCGCCTGGTGTCTGAT 10517 | || | ||||||||||| | || || ||||| || || || ||||||||||||||||| Sbjct 19508371 ATCG-TGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCTGAT 19508313 Query 10518 GCTGATCTCGCGGGGCCCCGTGTATTCCTCTGCGGAGAACGCGGGTTTGGACCTCGATGA 10577 |||||| || || ||||||| ||| || ||||| | || |||| | ||||||| Sbjct 19508312 GCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGACAC 19508253 Query 10578 CGAGTCAGCAGCACAACTGTTCCGCGACAGCGGCGGTGACCTCAAGAAGCTCGCCGCCTA 10637 |||| | | | | || | ||| ||| | || || ||||| || Sbjct 19508252 CGAGACCGTGGTCGACCTCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTC-------- 19508201 Query 10638 CGTCGATGAGAACGAGCTG---ATGAAGGAGTGGCACACCGGCTGCGACTGCAAGGTGGT 10694 || ||| |||| | ||| || ||||||||||| | || ||||||||| |||||| Sbjct 19508200 CG-CGAAGAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGT 19508142 Query 10695 GCCGGTCTACAACAGGGCCAGTTGGCCCGGACGGGACGCCTACAAGCGTGCCGAGAAGTG 10754 ||| |||| | || || | ||||||||| || ||| | | || || | || Sbjct 19508141 GCCTGTCTTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCT 19508082 Query 10755 GTGGATCGAAGCCACGAAGGAGGCCCGTCGCCTCATCGACTCGGGAGAGGCGAGGAGCGA 10814 |||||||| || ||| || ||| | | ||||| | || || |||| | | | Sbjct 19508081 CTGGATCGACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAA 19508022 Query 10815 CAACCTCAACAAGGAAGCGCAGAACGCGCTTCGCCGTCGTCTCGAACGAGGCGACCTTTC 10874 ||| |||||||| || ||||| || || || || | | || ||||| | | Sbjct 19508021 AAACGAGAACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCGAGTTCGC 19507962 Query 10875 CATGACGAGATTCGCCCTCGCGGCGTAACTCAACACCACGACCCCCTGGTGGGGTC--CA 10932 ||| | | ||| ||||| |||||| || || ||| |||| |||||| || || Sbjct 19507961 AATGTCCGACTACGCACTCGCTGCGTAA-TC----CCCCGAACCCCAGGTGGGTTCATCA 19507907 Query 10933 ACCATGCCCAGGAGGC--AAACAGTATGGCTGACAACGACACTCAGACCCCCGACACCAC 10990 |||||||||||||||| ||||| ||| | |||| || ||| ||| | ||| | Sbjct 19507906 ACCATGCCCAGGAGGCGAAAACAC-ATGTCCGACACCGTAACT---ACCGAAGGCACTCC 19507851 Query 10991 GACGGGCGACAA-----CGAAGG-CACCGACGCGGGTCAGGCACCCGGCGCTCCGGAGAC 11044 | | |||||| || || ||| ||| | | || ||| ||||| |||| Sbjct 19507850 GGCCGGCGACCCGACCCCGGTGGTCACTGACAAGCCGCTGGAACCGA---CTCCGAAGAC 19507794 Query 11045 CTTCAGCCGGGAGTACGTCGAGGAACTGAGGCGTGAGAACGCCAAGGCACGCACCTCGAA 11104 || | | || |||||| |||| || | | ||| ||| || || | || Sbjct 19507793 CTACGACGAGGCATACGTCAAGGAGCTTCGCCAGGAGGCCGCTGCTGCTCGGGTTGCCAA 19507734 Query 11105 GAACCAAGCGGTCGAAGACGC---CAAGGCAGAAGTCCGCAAGGAGTACGAGGCCAAGCT 11161 ||| | || ||||||| ||| |||||| | | || | | || ||| | || Sbjct 19507733 GAAGGACGCAGTCGAAGCCGCAGTCAAGGCGGC-GAACG--ACGCTCACACCGCCGAACT 19507677 Query 11162 GGCTGAGAAGGACACGGCATACACCGAGCTGCAGAACCAGCTCGGGCAGGCGTGGATTGA 11221 |||| ||||| | |||||||||| ||||| |||| || ||||| ||||| Sbjct 19507676 CGCTGCTCGCGACACTCGAATCACCGAGCTGGAGAACGAGCTGGGACAGGCTTGGATCCG 19507617 Query 11222 GCTCGAAAAGGTCTACACGGCCGTCGATGCCAAGGTCCCATCCGACCGCGTCCGCGCTTT 11281 ||| | ||| | | || | | | || ||||| || |||| || | ||| || Sbjct 19507616 GCTGCAGAAGCTGGAGACCTCGCTTGCCGCAAAGGTTCCCAGCGACAAGGTGCTCGCGTT 19507557 Query 11282 CGCCGAGATTCTCAAGGGCGAAGACCCCGATGCCATCAAGGCGTCGGCTGAGTC-AGCCA 11340 || || || | ||||||| ||| | || | ||| | ||| || || | || Sbjct 19507556 CGTTGACATCTTGCAGGGCGAGGACGCTGACTCGATCGCCGAGTCCGCGAAGAAGAACCT 19507497 Query 11341 AGCAACTGTTCGGCGGCAT-GACGGGCA-CCG--TCCCGGCCGTCGATCCCACCCAGGGC 11396 | ||||| ||||||| | ||| | | ||| | |||| |||| |||||||||||| Sbjct 19507496 CG-AACTGATCGGCGGTTTCGACAAGAAGCCGGTTTCCGGTT-TCGACCCCACCCAGGGC 19507439 Query 11397 TCTGGTGGT-GGCAAGCACACGCCGCTCAACGGAGACCCGATCCTCGACGCCATCAAGAA 11455 | |||||| |||| | || |||||||||||| |||||||||||| ||||||| ||| Sbjct 19507438 TTCGGTGGTCGGCAGGAACT-GCCGCTCAACGGTGACCCGATCCTCAACGCCATGAAG-- 19507382 Query 11456 GGCCGTCGGGGCGTAA-------TC---------CCCACTAC--GACAAGGAAGTAACCA 11497 ||| || ||| | | || |||| | | |||||||| | | || Sbjct 19507381 GGCGTTCTCGGCATCAAGTGATGTCGAGCTGAAACCCATTCCTAGACAAGGAGATTAGCA 19507322 Query 11498 ATCATGGCAGCAGGAACCACGTTCCCGGTCAACCACGCGCAGATCGCGCAGACCGGCGAC 11557 ||||| ||||| || | ||| | || | ||||| |||||||| ||||||||||| Sbjct 19507321 G--ATGGCCGCAGGCACTGCTTTCGCAGTTGATCACGCTCAGATCGCCCAGACCGGCGAT 19507264 Query 11558 TCCATGTTCAAGGGCTACCTGGAGCCCGAGCAGGCCCAGGACTACTTCGCGGAAGCGGAG 11617 |||||||||||||||||||||||||||||||||| |||| |||||||| || || ||| Sbjct 19507263 ACCATGTTCAAGGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAG 19507204 Query 11618 AAGACCTCCATCGTCCAGCGTGTCGCTCGGAAGATTCCGATGGGATCGACCGGCGTGAAG 11677 |||||||| |||||||||| |||| | |||| | |||||||| | || ||| |||| Sbjct 19507203 AAGACCTCGATCGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAG 19507144 Query 11678 ATTCCGCACTGGACCGGCGACGTTGCCGCCGCGTGGGTGGGCGAAGGCGACATGAAGCCC 11737 || ||||||||| ||||||||| ||| |||| | || || || |||||||||||| Sbjct 19507143 ATCCCGCACTGGGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCC 19507084 Query 11738 ATCACCAAGGGCGACATGAGCGTTCAGCAGG---TCGAGCCGCACAAGATCGCCACGATC 11794 |||||||||||| |||||| ||| |||| ||| ||| ||||||||||| |||||| Sbjct 19507083 ATCACCAAGGGCAACATGAC--TTC-GCAGACCATCGCGCCCCACAAGATCGCGACGATC 19507027 Query 11795 TTCATCGCCTCGGCTGAAACCGTTCGTGCGAACCCGGCCAACTACCTGGGCACCATGCGG 11854 ||| | || || || || ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 19507026 TTCGTGGCGTCTGCGGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGT 19506967 Query 11855 GTCAAGGTCGGCACCGCCATCGCGATGGCCTTCGACGAGGCCGCTCTGCACGGCACCGAC 11914 |||||| | |||||| |||||||||| ||||||| || || |||||||||||||| Sbjct 19506966 ACCAAGGTGGCGACCGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGAC 19506907 Query 11915 AGCCCGTT--CGACCAGTTCGTGGATCAGACCACGAAGGCCGTCGACATCACCCCGGCCG 11972 |||||||| ||||| | | | | ||||||||| |||||| || || | | | Sbjct 19506906 AGCCCGTTCCCGACC--TACATCGGTCAGACCACCAAGGCCATCTCGAT--TGCTGACAC 19506851 Query 11973 CGCCG--GCCACCACC---TACGACGCCATCGGCGTCAACGCGCTGTCGCTGCTCGTCAA 12027 | ||| ||||| ||| |||||| | | ||| |||| ||| ||||| || || Sbjct 19506850 CACCGGTGCCACGACCGTGTACGACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGTGAA 19506791 Query 12028 CGACGGCAAGAAGTGGCAGGCGACCCTGCTCGATGACATCGCTGAGCCCGTGCTCAACGG 12087 |||||||||||||||| ||||| || || |||||| | ||||| | || ||||| Sbjct 19506790 CGACGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAACGG 19506731 Query 12088 TGCCAAGGACGCGAACGGCCGTCCGCTGTTCGTGGAGAGCACCTACGAGGGTCTGACCAC 12147 || |||||| |||||| || ||||||||| | ||| |||||| ||| | || | Sbjct 19506730 CGCGAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTAC---GGTGAGGCCGC 19506674 Query 12148 G---CCGTACCGCGAGGGCCGCATCCTGGGCCGTACCACGATCCTGAGCGACCACGTCGC 12204 | |||| ||| |||||| ||| | | |||| | || ||||| ||||||||||||| Sbjct 19506673 GAGCCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGT 19506614 Query 12205 CAACGGCACCACGGTCGGCTACCAGGGCGACTTCACCCAGATCGTCTGGGGCCAGGTCGG 12264 | |||||||||||||||| | ||| |||||| ||||| || ||||||||||| |||| Sbjct 19506613 GGAGGGCACCACGGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGCCAGATCGG 19506554 Query 12265 CGGTCTGTCCTTCGACGTGACGGACCAGGCCACGCTGAACCTGGGCACTCCCGAAGAGCC 12324 |||||||||||||||||||||||| ||||| || |||||||||||||| || |||||| Sbjct 19506553 CGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTCG-AGAGCC 19506495 Query 12325 C-AAGTTCGTGTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTGGAGGCCGAGTTCG 12383 | || ||||| ||||||||||||||||||||||||||||||||||| ||||| |||| || Sbjct 19506494 CGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGCTGAGTACG 19506435 Query 12384 GTCTGCTCATCAACGACGTGGAAGCGTTCGTCAAGCTCACCAAC---------------- 12427 | | | |||||||| || ||||||||| || |||||| Sbjct 19506434 CGTTCCACTGCAACGACGCCGAGGCGTTCGTCGCTCTGACCAACGTGGTCAGCGGCGGCG 19506375 Query 12428 --GCCTGAGCCTGACTTGACATCGCACGGCGGGGGGCCCTTC-GGGGCCCCCTGCCAAG- 12483 | |||||||| |||||||||| ||| ||||||| ||| | | ||||| || | Sbjct 19506374 AGGGCTGAGCCTAACTTGACATCCACCGGGAGGGGGCCGTTCACGCGGCCCCTTCCTGGG 19506315 Query 12484 ----CGGAAAGGGCTGCATGAAGATTCGCAACAAGGCCAACGGCGGCGTAGCCGAGGTCA 12539 | || ||| || |||| ||| | || | |||||| || | || |||||| Sbjct 19506314 GTGTCTGAGAGGACTTCATGCGGATCCAATCCACCGTCAACGGTGGGTTCGCGGAGGTCT 19506255 Query 12540 CTGAGGACTACG-GCACCGCCCTGATCGCGGGCGGGGGCTGG 12580 | || || |||| || || ||||||||||| || || ||| Sbjct 19506254 CCGACGAGTACGCCCAGCG-CCTGATCGCGGCTGGCGGTTGG 19506214 >seq18 Length=36757632 Score = 623 bits (690), Expect = 3e-174 Identities = 654/863 (76%), Gaps = 59/863 (7%) Strand=Plus/Plus Query 33887 CGAGAACCGGATGCGCCGGTTGAAGTACTTGGCGAAGATCGGGTGGATACCCTCACTGAC 33946 ||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct 22717071 CGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACTGAC 22717130 Query 33947 ACCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTCCGGGTTTTGACTGGCACCGG 34006 |||||||||||||||||||||||||||||||||||||| || | ||||| |||||||| Sbjct 22717131 TCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCACCGG 22717190 Query 34007 GATACGCAGCTCGTGGCTGAACTGCTGTGCCGCGTGCTGGACCTCGTCGGCCAGCTCTCG 34066 ||| |||| ||| |||||||||| || ||||| | |||||| |||||| ||| || Sbjct 22717191 GATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTCCCG 22717250 Query 34067 GAGCATCTTCCGGAAGTGCTTGTCCAGAGGCGCTTTCGAGTACTTCCGACCCGTCATCGC 34126 | | ||| ||||||| || || | ||| ||| | || || |||| || Sbjct 22717251 CAAGAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAGGGC 22717310 Query 34127 CAGGTAGGACGCCACACCGAGATGCCCGACGCCGATGCGTCGGTTCCGGTCCAGGACCTC 34186 || ||||| ||||| ||||| ||||| || |||||||| ||||| || ||||| ||||| Sbjct 22717311 CAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAACCTC 22717370 Query 34187 CCGTGACTTCGGATCACCGACCGGGCTGAACGTCGCCCGGATCAGGAACCGTGCCATCAG 34246 || |||||||||| |||||| |||||||||||||||||||||||| | |||||| Sbjct 22717371 TCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCATCAG 22717430 Query 34247 CCTGTGCGACCGGATCAGGTCGATGGTGTCGACCTTCCCGTTGTCCTTGACGAACGCCGC 34306 | ||| | ||||||||||||||| |||| ||||||| ||| ||||||||||||| Sbjct 22717431 ACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGGCGTCGGTGACGAACGCCGC 22717490 Query 34307 CAGGTTGATGTGGCCGAGATTGCAGGGCTCCCACTCCTGCAGCGTGATCTCACCGCAGGG 34366 ||||||||||| || || ||||||||||||||| || |||||||||||| ||||| || Sbjct 22717491 GAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCCGCACGG 22717550 Query 34367 GTTGGTGCAGACGACCTCGTTGGGCTCTCCGACGTTGGACAGGCTCGAGTCCCAGAACCC 34426 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||| Sbjct 22717551 GTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCACATCCC 22717610 Query 34427 AGGCTCGCCGTTGGCGACCATGCCCTCCGTGATGGCCTTCAGCAC---GT---------T 34474 |||||||||||| || ||||| | || ||||||||||| || | Sbjct 22717611 CGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGCCTTCGT 22717670 Query 34475 GGAG-GCGTG----CCGCCCCGGCA-TCGTCTTGACCTGCTGCCAGAACTTCGCGTCGAC 34528 |||| ||| | || || || | |||| || | ||||||| |||| || Sbjct 22717671 GGAGCGCGGGTTGAGCGGGTCGACAGGAGCCTTGGCCAGGCTCCAGAACGCATCGTCCAC 22717730 Query 34529 CTCGACCGAGATGTTCGTCGTCCAGTGCTTCCCGGTCTCCGACTTGCAGTTGATGA---- 34584 |||||||||||||||||| |||||||| ||| | ||| |||| |||| ||| Sbjct 22717731 CTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGT 22717790 Query 34585 ----AGCG-GA--AGATGTCCT----------------CGTCT--------------TCC 34607 || | || | |||||| ||||| || Sbjct 22717791 CTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCTGCCAGTCCGCC 22717850 Query 34608 CAGTGCATCATCGACATGCGAGCCGACCGGCGAACACCGCCGGCCACCACACACTGCGCG 34667 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 22717851 CAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCACACACTGCGCG 22717910 Query 34668 ATGGCGTGGTCGATCTCCATCGC 34690 ||||||||||||||||||||||| Sbjct 22717911 ATGGCGTGGTCGATCTCCATCGC 22717933 Score = 179 bits (198), Expect = 1e-40 Identities = 450/677 (66%), Gaps = 34/677 (5%) Strand=Plus/Plus Query 42781 GAACTTCTCGGTGATGGCTTCCTTCGTCCAGTCGGTCAGGACATACGGGTACGTCG---- 42836 ||||| ||||||||||||||| |||||| | |||||| | || || | |||| Sbjct 22718115 GAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGGCTT 22718174 Query 42837 -----CCTTGCCCGACTGACCCATCC---AGTAGTCACCAAGCCTCGGCGGCTCGATACC 42888 |||||||| || |||| | ||||||| || | |||| | ||||| ||| Sbjct 22718175 CGGTGCCTTGCCCTTCTTCCCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACC 22718234 Query 42889 GAACTGCTCGGCCAGGGCCACGGCATACACCGCGAGCTGGAAGTCGTCACCCGGCTGCTT 42948 | | | || | || | || ||||| |||||||||||||||||||||| || || Sbjct 22718235 GTAGGTCATCGCGACCGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTT 22718294 Query 42949 GCCCGTCTTGTGGTCCCGGACCAGCAGGCCATCGTCGGTCTCGACCACGGCGTCGATGTA 43008 || ||||||| ||||||||| | || | ||||| | |||| |||||||||||||| Sbjct 22718295 CCCGGTCTTGTAGTCCCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGATGTA 22718354 Query 43009 GCCGCGAACCAAGACTCCGTCGAGGTCGATGTCGAACCCGAGCTCGATGCCCGGTGTCCC 43068 |||||||||| || |||||||| ||||| ||||| |||||||| | || || || Sbjct 22718355 TCCGCGAACCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACC 22718414 Query 43069 GTCCGGGGCGATCCAGATGACCTCTTCGGTGTGCGAGGTTGC--CCAGTCGATGTACTTG 43126 |||||||| | |||||| ||| | | ||| | | ||| ||| | |||| Sbjct 22718415 GTCCGGGGTCACCCAGATCTCCTGGCCCG-----GAGTCTCCCGCCACGCGAAGAACTTC 22718469 Query 43127 CCGACCTGCTCTAGGCCGATCTCGAATCGCCGTGCGATGTCAAGTCTTCCACCGTAACGA 43186 |||||||||| ||||||| | | || || ||||||| | || ||| || Sbjct 22718470 TCGACCTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGA 22718529 Query 43187 CC-GCTGGCGAACCAGTAGTCGAAGTTTGGCGTGATGGCGCACGAGGCGTTGATGTACTT 43245 || | || ||| | |||||||| || || || |||| | || || Sbjct 22718530 CCAGACCACG-TCCACCACTCGAAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTCGTT 22718588 Query 43246 CTGGTACGACTCCCGGAACACGGCCTGAGCGGCCTCCAGAGACATCGTCCGACCGCTCCG 43305 ||| | ||||||| | ||| || | || || | || || | ||| Sbjct 22718589 GGCGTAGTGCCAACGGAACATGTCCTTGGCCTCGTCAAGCGTCAGCGGCATGCCGTAGGA 22718648 Query 43306 CTCCCAAGCCTCTATGGCCT---------CGTGAACGGCGCTCCCCTG-GGCTGTCCAGG 43355 |||||| |||| | |||| |||| | || ||||||| ||| | ||||| Sbjct 22718649 CTCCCATACCTCGACCGCCTCAGCGACAGCGTGGAACGCAGTCCCCTGCGGCAG-CCAGG 22718707 Query 43356 CAGCGGGGCGCTGCCACGCCTTGTCGATGCGTGAGAGCTTGTA-GCTGTAGGGGCACTTC 43414 | || || ||||||||| |||||||||| || | ||||||||| || | ||||||||| Sbjct 22718708 CCGCTGGCCGCTGCCACACCTTGTCGATCCGAGCGAGCTTGTACGCCAT-CGGGCACTTC 22718766 Query 43415 TCGTACTGCTTGAGCTG 43431 |||||| |||| ||| Sbjct 22718767 GTGTACTGGTTGATCTG 22718783 >seq9 Length=46179939 Score = 179 bits (198), Expect = 1e-40 Identities = 450/677 (66%), Gaps = 34/677 (5%) Strand=Plus/Minus Query 42781 GAACTTCTCGGTGATGGCTTCCTTCGTCCAGTCGGTCAGGACATACGGGTACGTCG---- 42836 ||||| ||||||||||||||| |||||| | |||||| | || || | |||| Sbjct 16532229 GAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGGCTT 16532170 Query 42837 -----CCTTGCCCGACTGACCCATCC---AGTAGTCACCAAGCCTCGGCGGCTCGATACC 42888 |||||||| || |||| | ||||||| || | |||| | ||||| ||| Sbjct 16532169 CGGTGCCTTGCCCTTCTTCCCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGACACC 16532110 Query 42889 GAACTGCTCGGCCAGGGCCACGGCATACACCGCGAGCTGGAAGTCGTCACCCGGCTGCTT 42948 | | | || | || | || ||||| |||||||||||||||||||||| || || Sbjct 16532109 GTAGGTCATCGCGACCGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTT 16532050 Query 42949 GCCCGTCTTGTGGTCCCGGACCAGCAGGCCATCGTCGGTCTCGACCACGGCGTCGATGTA 43008 || ||||||| ||||||||| | || | ||||| | |||| |||||||||||||| Sbjct 16532049 CCCGGTCTTGTAGTCCCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGATGTA 16531990 Query 43009 GCCGCGAACCAAGACTCCGTCGAGGTCGATGTCGAACCCGAGCTCGATGCCCGGTGTCCC 43068 |||||||||| || |||||||| ||||| ||||| |||||||| | || || || Sbjct 16531989 TCCGCGAACCAGGATCCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACC 16531930 Query 43069 GTCCGGGGCGATCCAGATGACCTCTTCGGTGTGCGAGGTTGC--CCAGTCGATGTACTTG 43126 |||||||| | |||||| ||| | | ||| | | ||| ||| | |||| Sbjct 16531929 GTCCGGGGTCACCCAGATCTCCTGGCCCG-----GAGTCTCCCGCCACGCGAAGAACTTC 16531875 Query 43127 CCGACCTGCTCTAGGCCGATCTCGAATCGCCGTGCGATGTCAAGTCTTCCACCGTAACGA 43186 |||||||||| ||||||| | | || || ||||||| | || ||| || Sbjct 16531874 TCGACCTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGA 16531815 Query 43187 CC-GCTGGCGAACCAGTAGTCGAAGTTTGGCGTGATGGCGCACGAGGCGTTGATGTACTT 43245 || | || ||| | |||||||| || || || |||| | || || Sbjct 16531814 CCAGACCACG-TCCACCACTCGAAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTCGTT 16531756 Query 43246 CTGGTACGACTCCCGGAACACGGCCTGAGCGGCCTCCAGAGACATCGTCCGACCGCTCCG 43305 ||| | ||||||| | ||| || | || || | || || | ||| Sbjct 16531755 GGCGTAGTGCCAACGGAACATGTCCTTGGCCTCGTCAAGCGTCAGCGGCATGCCGTAGGA 16531696 Query 43306 CTCCCAAGCCTCTATGGCCT---------CGTGAACGGCGCTCCCCTG-GGCTGTCCAGG 43355 |||||| |||| | |||| |||| | || ||||||| ||| | ||||| Sbjct 16531695 CTCCCATACCTCGACCGCCTCAGCGACAGCGTGGAACGCAGTCCCCTGCGGCAG-CCAGG 16531637 Query 43356 CAGCGGGGCGCTGCCACGCCTTGTCGATGCGTGAGAGCTTGTA-GCTGTAGGGGCACTTC 43414 | || || ||||||||| |||||||||| || | ||||||||| || | ||||||||| Sbjct 16531636 CCGCTGGCCGCTGCCACACCTTGTCGATCCGAGCGAGCTTGTACGCCAT-CGGGCACTTC 16531578 Query 43415 TCGTACTGCTTGAGCTG 43431 |||||| |||| ||| Sbjct 16531577 GTGTACTGGTTGATCTG 16531561 >seq1 Length=46747018 Score = 118 bits (130), Expect = 3e-22 Identities = 254/369 (69%), Gaps = 18/369 (5%) Strand=Plus/Minus Query 516 GACTGGGACGAGAACTACCGGCAGCCGGTGCTGGCAGCAGCCGGCCACCGGTGCCAGATT 575 |||||||| ||| ||||||| ||||| || | || ||||| | ||| || | Sbjct 34905268 GACTGGGAGCTGAATTACCGGCTCCCGGTCCTTTCTGCTGCCGGGTGGCTGTGTGAGGT- 34905210 Query 576 CG--GGCTCGCGGTTGCCTCGGGAAGGCAACCGACGTGGACCACATCCGCAG--AGGCGA 631 || ||| | ||| ||| || || || |||||||| ||||||| | || ||| | Sbjct 34905209 CGACGGCCC-CGGCTGCGTCCGGGCTGCCACCGACGTAGACCACAA--GAAGCCAGGGAA 34905153 Query 632 CGACCACAGTCGCTCCAACCTGCAGGCAGCGTGCAACCG---CTGCCACGGCAAGAAGTC 688 ||||||| || ||||||||||| |||| | ||| |||||||||||||||||| Sbjct 34905152 CGACCACTCGCGGTCCAACCTGCA---AGCGATCTGCCGTGTCTGCCACGGCAAGAAGTC 34905096 Query 689 ATCCGCAGAAGGCCACGCCCGCAAGCGGCAGTTACGAGCAATGAGGAGGCGACCTATCGA 748 | |||| || ||| ||||| |||| | | || ||||| |||||| | Sbjct 34905095 AGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGGAGGAAGCGACCAGAACA 34905036 Query 749 GCGCCATCCCGGCTCTCGGT-AGCGGGCCAGGTGCCCGCTTTTCACCCAGGAGGTGTCAA 807 ||||| || || ||| | ||||||||||||||| || | ||||||||||||| | Sbjct 34905035 ACGCCACCCTGGGCGTCGTTAAGCGGGCCAGGTGCCTGC--TCCACCCAGGAGGTGAC-T 34904979 Query 808 GTGGGCGAAAGAGGCCCCATCGCCAAGCGATCGGATCAGCGCGTCCGACGCAACAAGACA 867 |||||| | | |||||||||| || || || | ||||| || ||||||| | Sbjct 34904978 GTGGGCACACGCGGCCCCATCGGAAAACGCGACGAAGAACGCGTTCGTCGCAACACCCCG 34904919 Query 868 GACAACCCG 876 || |||||| Sbjct 34904918 GAGAACCCG 34904910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164061319194240