Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_024137.1 Length=152778 Score E Sequences producing significant alignments: (Bits) Value seq494 84.2 2e-11 >seq494 Length=34644 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 24673 GCTACGTAGTCCTTATATACAGGATCAACATAG-TTAGAACCGTCTTGTACACGAGCAAT 24731 ||||| | || ||||| | | |||| || ||| || ||||| | |||||| | |||||| Sbjct 2543 GCTACATGCTCATTATACAAATGATCTAC-TAGATTTGAACCATATTGTACCCTAGCAAT 2601 Query 24732 AACTAAATCTAGTTGACCTTTGGCAGTATCCCAATCAGGACTCCCATTCCATTTAGACAT 24791 |||||||||| ||| || || |||||||| | ||| ||||||||||| || || Sbjct 2602 TACTAAATCTAATTGCGCTGCTGCTACATCCCAATTAATACTTCCATTCCATTTTGAAAT 2661 Query 24792 ATCAACGATGTAACCCAT 24809 ||| || |||| ||||| Sbjct 2662 ATCTACAATGTGTCCCAT 2679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488753193300480