Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq16 87.8 2e-12 >seq16 Length=39632211 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 142532 TGAAGAAGTCTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCG 142591 ||||||| |||| || ||| ||| ||| | | || ||||||||| |||| || Sbjct 38025260 TGAAGAACAATCCTGATGATCGGCGTATCATATTATCTGCTTGGAACCCTTCTGATCTCA 38025201 Query 142592 ACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGC 142651 | ||||| ||||||||||| |||||| | || ||| | || | |||| | Sbjct 38025200 AGCTGATGGCGCTTCCTCCGTGCCACATGTTTGCGCAGTTCTATGTGGCG--GAAGGGGA 38025143 Query 142652 GTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACA 142711 | || || |||||| |||||||||||||||| || | ||| || || ||||| |||| Sbjct 38025142 G-CTCTCGTGCCAGATGTATCAGCGTTCGGCGGATATGGGCCTTGGTGTGCCGTTTAACA 38025084 Query 142712 TTGCTTCGTACGCGCTTCTCAC 142733 | ||||| ||| | ||||| || Sbjct 38025083 TCGCTTCCTACTCTCTTCTTAC 38025062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500490591413760