Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq1375 572 5e-159 seq15 572 5e-159 seq16 567 2e-157 seq4 219 1e-52 seq6 203 1e-47 seq13 159 1e-34 seq3 159 1e-34 >seq1375 Length=152860 Score = 572 bits (634), Expect = 5e-159 Identities = 721/983 (73%), Gaps = 8/983 (1%) Strand=Plus/Minus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 ||||||| | ||| || | ||||||||||| |||| |||||||| ||||||| Sbjct 1369 TAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 1310 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGCTTC-ATTATTGCATTCATTGCGGCACCACCAG 28756 || | || ||| || | || | || ||||| ||||||||||| || || |||| Sbjct 1309 CCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAG 1251 Query 28757 TTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCA 28816 | || |||||||| || || |||||||| ||||| |||||| || |||||||| || | Sbjct 1250 TAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTA 1191 Query 28817 TATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 28874 | || || ||| | | || | | ||| || || || | || || ||||| || || Sbjct 1190 TTTCAGGTGCCATTATTCCTACTTCTGCA--GCTATTGGTTTGCATTTTTACCCGATCTG 1133 Query 28875 GGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 28934 ||||||| || ||||||||||||| |||||||| || || | |||| | || | Sbjct 1132 GGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCT 1073 Query 28935 CCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACT 28994 ||||| | |||| || | ||| ||||| || |||||||||||||| | || || Sbjct 1072 ACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 1013 Query 28995 AGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGT 29054 || ||| | || |||||| ||| ||||| |||||||| || ||||| || |||| || Sbjct 1012 GGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT 953 Query 29055 TTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTC 29114 |||| | |||||||| | |||||||| |||| || | |||||| | || || || Sbjct 952 TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 893 Query 29115 AGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTT 29174 || || ||||||| ||| | || ||||| || || || |||||||| |||||||| || Sbjct 892 TGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATT 833 Query 29175 CCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTC 29234 |||||| | || || ||||| || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 832 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC 773 Query 29235 GCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTT 29293 | || || || | | ||| | | || || || ||| | ||| || | |||| Sbjct 772 TTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 714 Query 29294 ACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGAC 29353 ||| || || ||||||||||| ||||| ||||| ||||| ||||||||||| ||||| | Sbjct 713 ACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCC 654 Query 29354 GTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTG 29413 | |||||||||||||||||| |||||| ||| |||||| |||| |||||| | || | Sbjct 653 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGG 594 Query 29414 CCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATC 29473 | |||||||| ||||| |||||||| |||| || || || ||| ||||| || || | Sbjct 593 CTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACC 534 Query 29474 TGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTT 29533 | || ||||| || || ||||| || | | || | | || ||||| |||||||||| Sbjct 533 TAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTT 474 Query 29534 GGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTC 29593 |||||||| || | || || |||||||| || | ||||| |||||||| |||||||||| Sbjct 473 GGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 414 Query 29594 ATAACTTCCCACTTGATCTGGCT 29616 | |||||||| || || || ||| Sbjct 413 ACAACTTCCCTCTAGACCTAGCT 391 >seq15 Length=39600445 Score = 572 bits (634), Expect = 5e-159 Identities = 721/983 (73%), Gaps = 8/983 (1%) Strand=Plus/Plus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 ||||||| | ||| || | ||||||||||| |||| |||||||| ||||||| Sbjct 11974445 TAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 11974504 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGCTTC-ATTATTGCATTCATTGCGGCACCACCAG 28756 || | || ||| || | || | || ||||| ||||||||||| || || |||| Sbjct 11974505 CCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAG 11974563 Query 28757 TTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCA 28816 | || |||||||| || || |||||||| ||||| |||||| || |||||||| || | Sbjct 11974564 TAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTA 11974623 Query 28817 TATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 28874 | || || ||| | | || | | ||| || || || | || || ||||| || || Sbjct 11974624 TTTCAGGTGCCATTATTCCTACTTCTGCA--GCTATTGGTTTGCATTTTTACCCGATCTG 11974681 Query 28875 GGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 28934 ||||||| || ||||||||||||| |||||||| || || | |||| | || | Sbjct 11974682 GGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCT 11974741 Query 28935 CCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACT 28994 ||||| | |||| || | ||| ||||| || |||||||||||||| | || || Sbjct 11974742 ACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 11974801 Query 28995 AGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGT 29054 || ||| | || |||||| ||| ||||| |||||||| || ||||| || |||| || Sbjct 11974802 GGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT 11974861 Query 29055 TTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTC 29114 |||| | |||||||| | |||||||| |||| || | |||||| | || || || Sbjct 11974862 TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 11974921 Query 29115 AGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTT 29174 || || ||||||| ||| | || ||||| || || || |||||||| |||||||| || Sbjct 11974922 TGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATT 11974981 Query 29175 CCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTC 29234 |||||| | || || ||||| || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 11974982 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC 11975041 Query 29235 GCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTT 29293 | || || || | | ||| | | || || || ||| | ||| || | |||| Sbjct 11975042 TTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 11975100 Query 29294 ACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGAC 29353 ||| || || ||||||||||| ||||| ||||| ||||| ||||||||||| ||||| | Sbjct 11975101 ACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCC 11975160 Query 29354 GTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTG 29413 | |||||||||||||||||| |||||| ||| |||||| |||| |||||| | || | Sbjct 11975161 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGG 11975220 Query 29414 CCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATC 29473 | |||||||| ||||| |||||||| |||| || || || ||| ||||| || || | Sbjct 11975221 CTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACC 11975280 Query 29474 TGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTT 29533 | || ||||| || || ||||| || | | || | | || ||||| |||||||||| Sbjct 11975281 TAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTT 11975340 Query 29534 GGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTC 29593 |||||||| || | || || |||||||| || | ||||| |||||||| |||||||||| Sbjct 11975341 GGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 11975400 Query 29594 ATAACTTCCCACTTGATCTGGCT 29616 | |||||||| || || || ||| Sbjct 11975401 ACAACTTCCCTCTAGACCTAGCT 11975423 >seq16 Length=39632211 Score = 567 bits (628), Expect = 2e-157 Identities = 720/983 (73%), Gaps = 8/983 (1%) Strand=Plus/Minus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 ||||||| | ||| || | ||||||||||| |||| |||||||| ||||||| Sbjct 8699530 TAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 8699471 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGCTTC-ATTATTGCATTCATTGCGGCACCACCAG 28756 || | || ||| || | || | || ||||| ||||||||||| || || |||| Sbjct 8699470 CCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAG 8699412 Query 28757 TTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCA 28816 | || |||||||| || || |||||||| ||||| |||||| || |||||||| || | Sbjct 8699411 TAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTA 8699352 Query 28817 TATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 28874 | || || ||| | | || | | ||| || || || | || || ||||| || || Sbjct 8699351 TTTCAGGTGCCATTATTCCTACTTCTGCA--GCTATTGGTTTGCATTTTTACCCGATCTG 8699294 Query 28875 GGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 28934 ||||||| || ||||||||||||| |||||||| || || | |||| | || | Sbjct 8699293 GGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCT 8699234 Query 28935 CCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACT 28994 ||||| | || | || | ||| ||||| || |||||||||||||| | || || Sbjct 8699233 ACACTTTTTACTTTGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 8699174 Query 28995 AGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGT 29054 || ||| | || |||||| ||| ||||| |||||||| || ||||| || |||| || Sbjct 8699173 GGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT 8699114 Query 29055 TTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTC 29114 |||| | |||||||| | |||||||| |||| || | |||||| | || || || Sbjct 8699113 TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 8699054 Query 29115 AGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTT 29174 || || ||||||| ||| | || ||||| || || || |||||||| |||||||| || Sbjct 8699053 TGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATT 8698994 Query 29175 CCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTC 29234 |||||| | || || ||||| || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 8698993 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC 8698934 Query 29235 GCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTT 29293 | || || || | | ||| | | || || || ||| | ||| || | |||| Sbjct 8698933 TTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 8698875 Query 29294 ACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGAC 29353 ||| || || ||||||||||| ||||| ||||| ||||| ||||||||||| ||||| | Sbjct 8698874 ACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCC 8698815 Query 29354 GTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTG 29413 | |||||||||||||||||| |||||| ||| |||||| |||| |||||| | || | Sbjct 8698814 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGG 8698755 Query 29414 CCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATC 29473 | |||||||| ||||| |||||||| |||| || || || ||| ||||| || || | Sbjct 8698754 CTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACC 8698695 Query 29474 TGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTT 29533 | || ||||| || || ||||| || | | || | | || ||||| |||||||||| Sbjct 8698694 TAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTT 8698635 Query 29534 GGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTC 29593 |||||||| || | || || |||||||| || | ||||| |||||||| |||||||||| Sbjct 8698634 GGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 8698575 Query 29594 ATAACTTCCCACTTGATCTGGCT 29616 | |||||||| || || || ||| Sbjct 8698574 ACAACTTCCCTCTAGACCTAGCT 8698552 >seq4 Length=41855496 Score = 219 bits (242), Expect = 1e-52 Identities = 216/279 (77%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 29338 CACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTA 29397 |||||||| ||||| || |||||||||||||||||| |||||| ||| |||||| || Sbjct 22261816 CACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTA 22261875 Query 29398 CACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCT 29457 || |||||| | || || |||||||| ||||| |||||||| |||| || || || | Sbjct 22261876 CATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGT 22261935 Query 29458 ACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGT 29517 || ||||| || || || || ||||| || || ||||| || | | || | | || Sbjct 22261936 ACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGA 22261995 Query 29518 CGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATG 29577 ||||| |||||||||||||||||| || | || || |||||||| || | ||||| ||| Sbjct 22261996 CGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATG 22262055 Query 29578 CATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 ||||| ||||||||||| |||||||| || || || ||| Sbjct 22262056 CATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 22262094 >seq6 Length=47127078 Score = 203 bits (224), Expect = 1e-47 Identities = 220/289 (76%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 29098 ATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAAC 29157 |||||| | || || || || || ||||||| ||| | || ||||| || || || ||| Sbjct 23298191 ATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAAC 23298132 Query 29158 ATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTT 29217 ||||| |||||||| || |||||| | || || ||||| || ||||| ||||| |||||| Sbjct 23298131 ATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTT 23298072 Query 29218 AGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGCGTGAGACGACTGAAGACAT 29276 ||||| ||||| ||||| | || || | || | ||| | | || || || ||| | Sbjct 23298071 AGTGCTATGCATGGTTCTTTGGTAAC-TTCTAGTTTGATCAGGGAAACCACAGAAAATGA 23298013 Query 29277 CTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGC 29336 ||| || | ||||||| || || ||||||||||| ||||| ||||| ||||| || Sbjct 23298012 ATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGC 23297953 Query 29337 TCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAAT 29385 ||||||||| ||||| || |||||||||||||||||| |||||| ||| Sbjct 23297952 TCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAT 23297904 >seq13 Length=54295181 Score = 159 bits (176), Expect = 1e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 29290 GGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTT 29349 ||||||| || || ||||||||||| ||||| ||||| ||||| ||||||||||| ||| Sbjct 52172336 GGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTT 52172277 Query 29350 GGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTT 29409 || || |||||||||||||||||| |||||| ||| |||||| |||| |||||| | Sbjct 52172276 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 52172217 Query 29410 GCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGG 29450 || || |||||||| ||||| |||||||| |||| || || Sbjct 52172216 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGG 52172176 >seq3 Length=51870232 Score = 159 bits (176), Expect = 1e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 29290 GGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTT 29349 ||||||| || || ||||||||||| ||||| ||||| ||||| ||||||||||| ||| Sbjct 19550276 GGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTT 19550335 Query 29350 GGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTT 29409 || || |||||||||||||||||| |||||| ||| |||||| |||| |||||| | Sbjct 19550336 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 19550395 Query 29410 GCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGG 29450 || || |||||||| ||||| |||||||| |||| || || Sbjct 19550396 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGG 19550436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146663203484096