Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq1375 609 7e-170 seq15 609 7e-170 seq16 605 8e-169 seq6 210 6e-50 seq4 185 2e-42 seq13 136 1e-27 seq3 136 1e-27 seq10 118 3e-22 >seq1375 Length=152860 Score = 609 bits (674), Expect = 7e-170 Identities = 728/981 (74%), Gaps = 8/981 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| |||| ||||| || ||||||||||| || || |||||||| || Sbjct 1374 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1315 Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGTTTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || | || ||| | || ||| ||| ||||| || ||||||||||| || Sbjct 1314 ATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 1256 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| |||||||| || || || |||||| | || ||||||||| |||||||| Sbjct 1255 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 1196 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 || || || || ||| | |||| | | ||| || || || | || || ||||| Sbjct 1195 TATTATTTCAGGTGCCATTATTCCTACTTCTGCA--GCTATTGGTTTGCATTTTTACCCG 1138 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || ||||||||| || ||||||||||||| |||||||| || || | |||| | Sbjct 1137 ATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATT 1078 Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080 || | ||||| | |||| || | ||| ||||| || |||||||||||||| | Sbjct 1077 GTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 1018 Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCT 19140 || || || ||||| ||||||||| |||||| || |||||||||||||| || || || Sbjct 1017 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 958 Query 19141 GCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGT 19200 || || ||| | |||| ||| |||||||||| ||| || | ||||||| | || Sbjct 957 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 898 Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260 || |||||| ||||||| ||| |||||||||||||||| || ||||| || |||||| Sbjct 897 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 838 Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320 || || |||||| | ||||| |||||||| |||||||| || ||||||||||| ||||| Sbjct 837 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 778 Query 19321 GGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTA 19379 ||||| ||| || | || | ||| | | ||||| || ||| | | |||| || | Sbjct 777 GGTTC-TTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 719 Query 19380 TGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTT 19439 || |||| || || ||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct 718 AGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTT 659 Query 19440 TGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTT 19499 ||| || | || ||||| || || ||||||||| |||||| |||||||||| || Sbjct 658 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTT 599 Query 19500 GGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATT 19559 || |||||||| || || || ||||||||| | || | || | || || ||||| || Sbjct 598 AGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTT 539 Query 19560 CAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGA 19619 |||| | ||||| || || || ||||| || | |||| | | || ||||| ||| | Sbjct 538 CAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAA 479 Query 19620 TACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAA 19679 |||||||||||| ||| | || ||||||||||| || | || || ||||| |||||||| Sbjct 478 TACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 419 Query 19680 TGCTCATAACTTCCCACTTGA 19700 |||||| |||||||| || || Sbjct 418 TGCTCACAACTTCCCTCTAGA 398 >seq15 Length=39600445 Score = 609 bits (674), Expect = 7e-170 Identities = 728/981 (74%), Gaps = 8/981 (1%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| |||| ||||| || ||||||||||| || || |||||||| || Sbjct 11974440 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 11974499 Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGTTTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || | || ||| | || ||| ||| ||||| || ||||||||||| || Sbjct 11974500 ATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 11974558 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| |||||||| || || || |||||| | || ||||||||| |||||||| Sbjct 11974559 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 11974618 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 || || || || ||| | |||| | | ||| || || || | || || ||||| Sbjct 11974619 TATTATTTCAGGTGCCATTATTCCTACTTCTGCA--GCTATTGGTTTGCATTTTTACCCG 11974676 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || ||||||||| || ||||||||||||| |||||||| || || | |||| | Sbjct 11974677 ATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATT 11974736 Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080 || | ||||| | |||| || | ||| ||||| || |||||||||||||| | Sbjct 11974737 GTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 11974796 Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCT 19140 || || || ||||| ||||||||| |||||| || |||||||||||||| || || || Sbjct 11974797 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 11974856 Query 19141 GCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGT 19200 || || ||| | |||| ||| |||||||||| ||| || | ||||||| | || Sbjct 11974857 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 11974916 Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260 || |||||| ||||||| ||| |||||||||||||||| || ||||| || |||||| Sbjct 11974917 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 11974976 Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320 || || |||||| | ||||| |||||||| |||||||| || ||||||||||| ||||| Sbjct 11974977 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 11975036 Query 19321 GGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTA 19379 ||||| ||| || | || | ||| | | ||||| || ||| | | |||| || | Sbjct 11975037 GGTTC-TTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 11975095 Query 19380 TGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTT 19439 || |||| || || ||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct 11975096 AGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTT 11975155 Query 19440 TGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTT 19499 ||| || | || ||||| || || ||||||||| |||||| |||||||||| || Sbjct 11975156 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTT 11975215 Query 19500 GGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATT 19559 || |||||||| || || || ||||||||| | || | || | || || ||||| || Sbjct 11975216 AGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTT 11975275 Query 19560 CAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGA 19619 |||| | ||||| || || || ||||| || | |||| | | || ||||| ||| | Sbjct 11975276 CAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAA 11975335 Query 19620 TACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAA 19679 |||||||||||| ||| | || ||||||||||| || | || || ||||| |||||||| Sbjct 11975336 TACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 11975395 Query 19680 TGCTCATAACTTCCCACTTGA 19700 |||||| |||||||| || || Sbjct 11975396 TGCTCACAACTTCCCTCTAGA 11975416 >seq16 Length=39632211 Score = 605 bits (670), Expect = 8e-169 Identities = 727/981 (74%), Gaps = 8/981 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| |||| ||||| || ||||||||||| || || |||||||| || Sbjct 8699535 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 8699476 Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGTTTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || | || ||| | || ||| ||| ||||| || ||||||||||| || Sbjct 8699475 ATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 8699417 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| |||||||| || || || |||||| | || ||||||||| |||||||| Sbjct 8699416 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 8699357 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 || || || || ||| | |||| | | ||| || || || | || || ||||| Sbjct 8699356 TATTATTTCAGGTGCCATTATTCCTACTTCTGCA--GCTATTGGTTTGCATTTTTACCCG 8699299 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || ||||||||| || ||||||||||||| |||||||| || || | |||| | Sbjct 8699298 ATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATT 8699239 Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080 || | ||||| | || | || | ||| ||||| || |||||||||||||| | Sbjct 8699238 GTTCTACACTTTTTACTTTGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 8699179 Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCT 19140 || || || ||||| ||||||||| |||||| || |||||||||||||| || || || Sbjct 8699178 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 8699119 Query 19141 GCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGT 19200 || || ||| | |||| ||| |||||||||| ||| || | ||||||| | || Sbjct 8699118 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 8699059 Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260 || |||||| ||||||| ||| |||||||||||||||| || ||||| || |||||| Sbjct 8699058 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 8698999 Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320 || || |||||| | ||||| |||||||| |||||||| || ||||||||||| ||||| Sbjct 8698998 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 8698939 Query 19321 GGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTA 19379 ||||| ||| || | || | ||| | | ||||| || ||| | | |||| || | Sbjct 8698938 GGTTC-TTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 8698880 Query 19380 TGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTT 19439 || |||| || || ||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct 8698879 AGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTT 8698820 Query 19440 TGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTT 19499 ||| || | || ||||| || || ||||||||| |||||| |||||||||| || Sbjct 8698819 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTT 8698760 Query 19500 GGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATT 19559 || |||||||| || || || ||||||||| | || | || | || || ||||| || Sbjct 8698759 AGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTT 8698700 Query 19560 CAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGA 19619 |||| | ||||| || || || ||||| || | |||| | | || ||||| ||| | Sbjct 8698699 CAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAA 8698640 Query 19620 TACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAA 19679 |||||||||||| ||| | || ||||||||||| || | || || ||||| |||||||| Sbjct 8698639 TACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 8698580 Query 19680 TGCTCATAACTTCCCACTTGA 19700 |||||| |||||||| || || Sbjct 8698579 TGCTCACAACTTCCCTCTAGA 8698559 >seq6 Length=47127078 Score = 210 bits (232), Expect = 6e-50 Identities = 222/290 (77%), Gaps = 2/290 (1%) Strand=Plus/Minus Query 19188 TATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAA 19247 ||||||| | || || |||||| ||||||| ||| |||||||||||||||| || || Sbjct 23298192 TATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAA 23298133 Query 19248 CATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATT 19307 ||| || |||||||| || |||||| | ||||| |||||||| |||||||| || ||||| Sbjct 23298132 CATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATT 23298073 Query 19308 TAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGG 19366 |||||| ||||| ||||| ||| || | || | ||| | | ||||| || ||| | | Sbjct 23298072 TAGTGCTATGCATGGTTC-TTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATG 23298014 Query 19367 TATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTG 19426 |||| || | || |||| || || ||||||||||| ||||| |||||||| |||| Sbjct 23298013 AATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTG 23297954 Query 19427 CTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAAT 19476 |||| || |||||||| || | || ||||| || || ||||||||| Sbjct 23297953 CTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAT 23297904 >seq4 Length=41855496 Score = 185 bits (204), Expect = 2e-42 Identities = 204/272 (75%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 19429 CATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTA 19488 || || |||||||| || | || ||||| || || ||||||||| |||||| || Sbjct 22261816 CACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTA 22261875 Query 19489 CATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGC 19548 |||||||| || || |||||||| || || || ||||||||| | || | || | || Sbjct 22261876 CATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGT 22261935 Query 19549 ACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGT 19608 || ||||| |||||| | ||||| || || || ||||| || | |||| | | || Sbjct 22261936 ACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGA 22261995 Query 19609 CGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATG 19668 ||||| ||| ||||||||||||| ||| | || ||||||||||| || | || || ||| Sbjct 22261996 CGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATG 22262055 Query 19669 CACGAACGTAATGCTCATAACTTCCCACTTGA 19700 || |||||||||||||| |||||||| || || Sbjct 22262056 CATGAACGTAATGCTCACAACTTCCCTCTAGA 22262087 >seq13 Length=54295181 Score = 136 bits (150), Expect = 1e-27 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 19351 GAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACT 19410 |||||||| ||| | | |||| || | || |||| || || ||||||||||| ||| Sbjct 52172366 GAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACT 52172307 Query 19411 TATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTC 19470 || |||||||| |||||||| || |||||||| || | || ||||| || || ||| Sbjct 52172306 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 52172247 Query 19471 AACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTT 19530 |||||| |||||| |||||||||| || || |||||||| || || || ||||||||| Sbjct 52172246 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 52172187 >seq3 Length=51870232 Score = 136 bits (150), Expect = 1e-27 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 19351 GAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACT 19410 |||||||| ||| | | |||| || | || |||| || || ||||||||||| ||| Sbjct 19550246 GAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACT 19550305 Query 19411 TATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTC 19470 || |||||||| |||||||| || |||||||| || | || ||||| || || ||| Sbjct 19550306 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 19550365 Query 19471 AACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTT 19530 |||||| |||||| |||||||||| || || |||||||| || || || ||||||||| Sbjct 19550366 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 19550425 >seq10 Length=21498587 Score = 118 bits (130), Expect = 3e-22 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 19206 TGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTT 19265 |||||| ||||||| ||| ||||||||| |||||| || ||||| || |||||||| || Sbjct 19440989 TGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGCACCCATT 19440930 Query 19266 CCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTC 19325 ||||| | ||||| | |||||| ||| | || || ||||||||| ||| | |||| Sbjct 19440929 TCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGTATGGTTT 19440870 Query 19326 GCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCT 19384 | || || || | | || | | |||| || || | | |||| ||| | | | Sbjct 19440869 TTTGGTAACTTC-TAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACGAAAGTT 19440811 Query 19385 ACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438 | | || || ||||||||||| ||||| |||||||| ||||||| | || || Sbjct 19440810 ATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAACTGCTCAAGAGTTTT 19440757 Score = 118 bits (130), Expect = 3e-22 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 19206 TGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTT 19265 |||||| ||||||| ||| ||||||||| |||||| || ||||| || |||||||| || Sbjct 20472797 TGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGCACCCATT 20472738 Query 19266 CCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTC 19325 ||||| | ||||| | |||||| ||| | || || ||||||||| ||| | |||| Sbjct 20472737 TCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGTATGGTTT 20472678 Query 19326 GCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCT 19384 | || || || | | || | | |||| || || | | |||| ||| | | | Sbjct 20472677 TTTGGTAACTTC-TAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACGAAAGTT 20472619 Query 19385 ACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438 | | || || ||||||||||| ||||| |||||||| ||||||| | || || Sbjct 20472618 ATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAACTGCTCAAGAGTTTT 20472565 Score = 100 bits (110), Expect = 8e-17 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 19243 CATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCA 19302 || ||||| || |||||||| || |||||| | ||||| |||||||| ||| |||| || Sbjct 16594594 CACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCC 16594653 Query 19303 CTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAAA-CTACTGA 19361 ||||||| || || || |||| | || || | | | ||| | ||| | || || Sbjct 16594654 CTATTTAATGTTATACATTGTTCTTTGGTAACTTT-TAGTTTGATCAAAAAAACCACAGA 16594712 Query 19362 AGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGT 19421 | | | |||| || | || ||| || || ||||||||||| ||||| || |||| Sbjct 16594713 AAATGAATCTGTTAATGAAGGTTACGGATTCGGTCAAGAAGAAGAAACTTACAATTTTGT 16594772 Query 19422 TGCTGCTCATGGGTATTTTGGTCG 19445 |||||||| || |||| |||||| Sbjct 16594773 AGCTGCTCACGGTTATTCTGGTCG 16594796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141146493628608