Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_028662.1 Length=50418 Score E Sequences producing significant alignments: (Bits) Value seq8 1038 0.0 seq18 540 3e-149 seq1 502 8e-138 seq9 378 2e-100 seq14 100 9e-17 >seq8 Length=24646021 Score = 1038 bits (1150), Expect = 0.0 Identities = 1451/2020 (72%), Gaps = 93/2020 (5%) Strand=Plus/Minus Query 11674 CGTCAAGGGATGGGCACGGGTAGCCACAGGGCGCGAAACATGCGCCTGGTGCCTGATGCT 11733 ||| ||||| ||||| |||| ||||| ||||||||||||||||||||||| |||||||| Sbjct 19508369 CGTGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCTGATGCT 19508310 Query 11734 CATCTCCAGAGGTCCGGTATACGAGAGCGCACGTACAGCAGGTCTGCTACTCGACAACGA 11793 || ||| | || || | ||| || || | ||||| | ||||||| ||| Sbjct 19508309 GATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGACACCGA 19508250 Query 11794 GGTTGTAGCCGATGTGTGGAGAGACGCCGGCGAAGACCTGGAAGCGTTCAAATCGC-AGG 11852 | || | ||| | |||| || || ||| || ||||| |||| ||| | | Sbjct 19508249 GACCGTGGTCGACCTCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTC----CGCGAAG 19508194 Query 11853 TCAGCGATTCC---ATGAACGACTGGCACGCAGGCTGCGACTGCATCGTGGTCCCGGTCT 11909 | | | || || | || ||||||||||| ||||||||| | ||||| || |||| Sbjct 19508193 AGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGTCT 19508134 Query 11910 TCGATACCGAGAACTGGGTCGGCAAGGCCGCGTACGAGCACGCGAACCAGCTGTGGATCG 11969 |||| ||||||||| ||| |||||||| | || | ||| ||||| ||||||| Sbjct 19508133 TCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGATCG 19508074 Query 11970 ATGCCGCCAACGAGGCTTCCGAACTCATGTCGTCTGGTGAGTCCCGCACCAACAACCGAT 12029 | || | || || || | | ||||| | ||||| || ||||| |||| ||| Sbjct 19508073 ACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGAGA 19508014 Query 12030 ATAAGGAGACGCTCAACGCGCTCCGACGCCGCCTTGAGCGCGGCGACGTTTC--TGTCCC 12087 | ||||||||| ||||||| ||||| |||||| | | |||||||| | | ||| || Sbjct 19508013 ACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCGAGTTCGCAATGT-CC 19507955 Query 12088 GTCTTACGCACACGCTGCGTAATCCGCAGAACCCCAGGTGGGTTCCCTTACTGATTGCCC 12147 | | ||||||| ||||||||||||| | ||||||||||||||||| || ||||| Sbjct 19507954 GAC-TACGCACTCGCTGCGTAATCCCCCGAACCCCAGGTGGGTTCATCAAC--CATGCCC 19507898 Query 12148 AGGAGGCGAAATCACATGTCCGACAATCCCACTCCCGACACCACTCCAGCTGACGAGTCG 12207 ||||||||||| ||||||||||||| ||| |||| |||||| || | ||| Sbjct 19507897 AGGAGGCGAAAACACATGTCCGACACCGTAACTACCGAAGGCACTCCGGCCGGCGA---C 19507841 Query 12208 CCGGCCCAGGAGGCCAACGACAAGCCGCTGAAGCAGGAACCGAAGACCTACTCAGCCGAG 12267 ||| ||| || || || |||||||||||| | | | |||||||||||| | |||| Sbjct 19507840 CCGACCCCGGTGGTCACTGACAAGCCGCTGGAACCGACTCCGAAGACCTAC---GACGAG 19507784 Query 12268 ---TATGTAACCGAACTCCGACAGGAGGCGGCTGCGGCCCGAGTGGCCAAGCGCGAGGCC 12324 || || | || || || |||||||| ||||| || || || |||||| || || Sbjct 19507783 GCATACGTCAAGGAGCTTCGCCAGGAGGCCGCTGCTGCTCGGGTTGCCAAGAAGGACGCA 19507724 Query 12325 GAGGAGAGGATCA-CCAAGGAACTGAACGAGAAGCACCAGGCCGAGCTTGCTGATCGCGA 12383 | || || || ||||| |||||| ||| ||||| || |||| |||||| Sbjct 19507723 GTCGA-AGCCGCAGTCAAGGCGGCGAACGACGCTCACACCGCCGAACTCGCTGCTCGCGA 19507665 Query 12384 TACGCGAATCACCGAGTTGGAGAACGAGATCGGCAAGGCGTGGATCGAACTGGAGAAGGT 12443 || |||||||||||| ||||||||||| | || |||| |||||| ||| ||||| | Sbjct 19507664 CACTCGAATCACCGAGCTGGAGAACGAGCTGGGACAGGCTTGGATCCGGCTGCAGAAGCT 19507605 Query 12444 GTATCTCTCGCTTGAGGCCAAGGTTCCCAACGACAAGGTTCGGGCCTTCGTGGAGATTCT 12503 | | |||||||| || |||||||||| ||||||||| | || ||||| || || | Sbjct 19507604 GGAGACCTCGCTTGCCGCAAAGGTTCCCAGCGACAAGGTGCTCGCGTTCGTTGACATCTT 19507545 Query 12504 GGAGGGCACCGACAAGGAAAGCATTGCCGAGAGCGTGAAGTCCCGGCTCGAACTCGTCGG 12563 | ||||| ||| || || |||||| || |||| |||||||| |||| Sbjct 19507544 GCAGGGCGAGGACGCTGACTCGATCGCCGAGTCCGCGAAGAAGAACCTCGAACTGATCGG 19507485 Query 12564 TGGGTTCGAGGAGAAGAAGGGCTTTGTGTCCGGCTTTGACCCCACTCAGGGTTTCGGTGG 12623 || ||||| ||||| | || ||||| || |||||||| ||||| |||||||| Sbjct 19507484 CGGTTTCGACAAGAAGCCG------GTTTCCGGTTTCGACCCCACCCAGGGCTTCGGTGG 19507431 Query 12624 AAAGCAGCACATGGCTCTCAACGGAGACCCGATTGTCCAGGCCGTCATCAAGGCCG---T 12680 |||| | || | |||||||| |||||||| || | || ||| |||| || | Sbjct 19507430 TCGGCAGGAACTGCCGCTCAACGGTGACCCGATCCTCAA---CGCCATGAAGGGCGTTCT 19507374 Query 12681 GGGCGCTAAGTGAT---CACCTTAAAC---------GA-AAGGA-ATTGAAGCA-ATG-- 12723 ||| ||||||| | || |||| || ||||| ||| |||| ||| Sbjct 19507373 CGGCATCAAGTGATGTCGAGCTGAAACCCATTCCTAGACAAGGAGATT--AGCAGATGGC 19507316 Query 12724 ---------AGCTTCAGC-CTCAACCACGCTCAGATCGCCCAGACCGGCGATTCGATGTT 12773 |||| || | | ||||||||||||||||||||||||||| | ||||| Sbjct 19507315 CGCAGGCACTGCTTTCGCAGTTGATCACGCTCAGATCGCCCAGACCGGCGATACCATGTT 19507256 Query 12774 CCAGGGGTACCTGGAACCGGAGCAGGCGCAGGACTACTTCGCGGAGGCCGAGAAGACCTC 12833 | |||| |||||||| || ||||||||| |||| |||||||| ||||||||||||||||| Sbjct 19507255 CAAGGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACCTC 19507196 Query 12834 TATCGTCCAGAAGTTCGCCACCAAGATCCCTATGGGTCCGACCGGCGTGAAGATTCCGCA 12893 ||||||||| |||||||| ||| | || |||||| | || ||| |||||| ||||| Sbjct 19507195 GATCGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCGCA 19507136 Query 12894 CTGGACCGGCGACGTTAGCGCGTCGTGGATCGGTGAGGGCGAGATGAAGCCGATCACCAA 12953 |||| ||||||||| || || ||||||||||||||| || |||||||| |||||||| Sbjct 19507135 CTGGGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACCAA 19507076 Query 12954 GGGCGACATGACCTCTCAGGTTGTGGCTCCCCACAAGATCGCTACCATCTTCGTCGCCTC 13013 |||| ||||||| || ||| | || |||||||||||||| || |||||||| || || Sbjct 19507075 GGGCAACATGACTTCGCAGACCATCGCGCCCCACAAGATCGCGACGATCTTCGTGGCGTC 19507016 Query 13014 TGCTGAAACGGTTCGTGCGAACCCCGCCAACTACCTGGGCACCATGCGGACCAAGGTCGC 13073 ||| || || || ||||| |||||||||||||||||||| |||||||| |||||||| || Sbjct 19507015 TGCGGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTGGC 19506956 Query 13074 GNNNNNNNNNNNNNNNNNNNNNNACAACGCCGCGCTGTGGGGAGACGACAGCCCGTTCGC 13133 | || ||| ||| || || ||||||||||||| | Sbjct 19506955 GACCGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGACAGCCCGTTCCC 19506896 Query 13134 CAAGTACCTGGCGCAGACCACGAAGCGGGTCTCGCTGGCT---TCGGCTGGTGCTCGCAC 13190 | ||| | | |||||||| ||| ||||| | ||| | | ||||| || Sbjct 19506895 GACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACCACCGGTGCCACGAC 19506836 Query 13191 CGCCTACGACGCGTTCGGCGTCGAGGGCCTGACCCAGCTGGTCAAGCCGGTTTCGGGTGC 13250 || |||||| | | | ||| | ||||||| || |||||| || || ||| Sbjct 19506835 CGTGTACGACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGTGAA--CG---ACGG---- 19506785 Query 13251 CAAGCACTCCTGGACCCAGACCCTTCTGGACGACACGGCTGAGCCGATCCTCAACGGTGC 13310 |||| | |||||||| |||||||||||||||| | ||||||||||| ||||| || Sbjct 19506784 CAAGAA---GTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAACGGCGC 19506728 Query 13311 CAAGGACCAGAACGGTCGCCCGCTGTTCGTGGAGTCGACCTACGAGGGTCTGACCTCG-- 13368 ||||||||||||||||||||||||||| | |||||||||||| ||| | || || Sbjct 19506727 GAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTAC---GGTGAGGCCGCGAG 19506671 Query 13369 -CCGTATCGCGAGGGCCGGATCCTGGGCCGTCCGACCATCCTGTCGGATCACGTTGCCCG 13427 |||| || |||||||||| | | ||||||||||||||| || ||||| | Sbjct 19506670 CCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGT---CGT 19506614 Query 13428 CGACGGCATC---GTCGGCTTCATGGGCGACTTCAGCCAGATCGTCTGGGGCCAGGTCGG 13484 || |||| | |||||||||||||| |||||| |||| || ||||||||||| |||| Sbjct 19506613 GGAGGGCACCACGGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGCCAGATCGG 19506554 Query 13485 TGGCCTGAGCTTCGACGTTACGGATCAGGCAACCCTGAACCTTGGTACGTTCCAGTCCCC 13544 || ||| ||||||||| ||||||||||| ||||||||||| || || || || ||| Sbjct 19506553 CGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTCGAGAGCCC 19506494 Query 13545 GAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGAGTCGAGGCCGAGTACGG 13604 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 19506493 GAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGCTGAGTACGC 19506434 Query 13605 CCTGCTCATCAACGACCTGGACGCGTTCGTGGCGCTGACC 13644 | | | ||||||| || |||||||| || |||||| Sbjct 19506433 GTTCCACTGCAACGACGCCGAGGCGTTCGTCGCTCTGACC 19506394 Score = 239 bits (264), Expect = 1e-58 Identities = 495/733 (68%), Gaps = 29/733 (4%) Strand=Plus/Minus Query 13995 ATGGCCTACGCAAAGGCAACTGACGTAACAACTCTGTGGGCCAGGGAGCCTGACGAAGAG 14054 ||||||||||| | || ||||| || ||||||||| ||||||||| ||| Sbjct 19506138 ATGGCCTACGCGACCGCTGACGACGTTGTGACGTTGTGGGCCAAGGAGCCTGAGCCAGAA 19506079 Query 14055 GTCGTTCACCTGATCGAGCGCCGACTGGAACAGGTCGAGCGCATGATCCGTAGGCGCATC 14114 ||| | ||||||||||||||||| ||||||||||||||||||||||| | || ||| Sbjct 19506078 GTCATGGCGCTGATCGAGCGCCGACTCGAACAGGTCGAGCGCATGATCCGGCGTCGGATC 19506019 Query 14115 CCAGATCTCGATGAACGGGTCGAGGACGACGATTACCTAGCCGACGTTGTCGACATCGAG 14174 |||||||| || | |||| ||| | || ||||| | ||||||||||| Sbjct 19506018 CCAGATCTGGACGCCAGGGTGTCTTCGGACATCTTCCGGGCCGATCTGATCGACATCGAG 19505959 Query 14175 GCCGACGTGGTGCTACGTCTCGTCCGCAACCCCGAGGGCTACATCTCGGAAACGGACGGT 14234 ||||||| |||||| ||||| || || ||||| ||||||||| ||||||| || ||||| Sbjct 19505958 GCCGACGCGGTGCTGCGTCTGGTGCGTAACCCGGAGGGCTACCTCTCGGAGACCGACGGG 19505899 Query 14235 CAGTACACGTACCAACTGAACGCCGACCTTGCTGCTGGCCGGCTGGAGATCCTTCCGCAT 14294 |||||| ||||| || | || || || || ||| ||| | |||||| | Sbjct 19505898 GCGTACACCTACCAGCTCCAGGCTGATCTGTCTCAGGGCAAGCTCGTCATCCTTGGCGAA 19505839 Query 14295 GAGTGGGAGATCCTCGGTGCTCCGCTGA-GATCCGGTATGGCGGTTCTCGTCCCGAGAGT 14353 |||||| || ||| || || | || || | ||| | ||||||||| | Sbjct 19505838 GAGTGGACGA-CCTTGGGAGTCAACCGACTCTCGCGCATGTCCACCATCGTCCCGAACAT 19505780 Query 14354 GATCATGCCGACATGATCGACCCCAGCGCCAAGCAGCCGAAGGC-ACCA--TACCCTCCG 14410 | |||||||||||| || |||||| | |||| | | | || ||||| ||| Sbjct 19505779 CGTGATGCCGACATGAGCG---CCAGCGACGTTCAGCGGGCTCCGATCAAGTACCCGCCG 19505723 Query 14411 GGTTTCATCGTCGCGGTCAAGCCGGAGCAGGTCAACCCCAAAGGCTGTAAGCACGAAGCG 14470 || || || | ||||||| || || || ||| || || || | ||||||||| Sbjct 19505722 GGGTTTCTCCTGGCGGTCACACCTGACCAAGTCGACGCCGCGATGTGCGACCACGAAGCG 19505663 Query 14471 ACTCCCCCGGTGTGCAACTGCGCTCACGACTGGCGCATCACATGGGGCAACGT------C 14524 ||| ||||| ||| |||||| ||||||||||||||| | |||||||| | Sbjct 19505662 GATCCTCCGGTCTGCTACTGCGTCCACGACTGGCGCATCGAGTTCGGCAACGTCTCTCGC 19505603 Query 14525 GAG---AGGCGGGA------------TTCATGAGTCTGCTGGATCACGGAGCACGCTACG 14569 || | || | | | ||||| || || ||| |||||| || ||| Sbjct 19505602 CAGCCCAAGCCGAAAGCGACGTACATCTGATGAGCCTCCTCGATACCGGAGCCCGGTACC 19505543 Query 14570 ACGACGTAATCGTCTACCCCGAGGAGACCATCACCGACGAGGACGGCAACACGTTCACCA 14629 | || ||||||||||||| ||| ||| ||||| |||||| |||| | ||| Sbjct 19505542 AGCCGGTGCTCGTCTACCCCGAAGAGCTGGTCATCGACGCGGACGGGAACAAGAAGACCC 19505483 Query 14630 GACCGTCGAAGACGGGCATTCCAGCCAAGGCGCGGTTCCAGATCATGAACCAGTCGGGCA 14689 ||||||||||| || | ||| | || || |||||| || |||||||| || | Sbjct 19505482 AGCCGTCGAAGACCCCGATCCAAGCGATCGCACGCTTCCAGGTCGCCAACCAGTCCGGTA 19505423 Query 14690 CTTCGGCCCGACG 14702 | ||||| ||||| Sbjct 19505422 CGTCGGCACGACG 19505410 Score = 196 bits (216), Expect = 2e-45 Identities = 181/227 (80%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 11294 TTCTACGACGCACAGCGCGAACTCCACTTCCCTGAACTACCCCGAAACGAGATGTATCGG 11353 ||||||||| | |||||| ||||||| ||| || || ||||| ||||||| || ||| Sbjct 19508608 TTCTACGACTCCCAGCGCAGACTCCACCACCCGGAGCTTCCCCGCAACGAGAGGTTGCGG 19508549 Query 11354 GGCGAGCTTCAGTGGGAGGGGTTCGTCAGGGCTATGGAACCGGCTCGAAAGGAGTTGTCG 11413 |||| || ||||||||| ||||||||||| ||||| || || ||||||| ||||||| Sbjct 19508548 AGCGACCTCCAGTGGGAGTGGTTCGTCAGGAACATGGAGCCCGCACGAAAGGGGTTGTCG 19508489 Query 11414 CAGGCCGACGCTCCCCAGAGC-GCGGTTACCAAAGTGACCCTGGCGGCTGTTCGCGAGGT 11472 ||||||||| |||| || ||| ||||| ||||| ||||| ||||| | || ||||| || Sbjct 19508488 CAGGCCGACTCTCCTCA-AGCTGCGGTCACCAAGCTGACCTTGGCGACAGTGCGCGAAGT 19508430 Query 11473 GGAGATGGCTGCACGACGGCAGGTGATCGCTGCCGTCAAGAACGACC 11519 ||||||||| | || || ||| | |||| || ||||||||||||| Sbjct 19508429 GGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACC 19508383 >seq18 Length=36757632 Score = 540 bits (598), Expect = 3e-149 Identities = 654/895 (73%), Gaps = 64/895 (7%) Strand=Plus/Plus Query 33642 GAACCGCACCCGACGGATGAAGTACCGGCTGAAGATCGGGTGGATGCCCTCGGAGACGCC 33701 |||||| | || ||||||||||||||| ||||||||||||||| ||||| ||| || Sbjct 22717074 GAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACTGACTCC 22717133 Query 33702 GGCCAGCTTCGCCACCGTCCCTGTCGGAGCCCCCGTCCTCTTCTTGACCGGCACCGGGAT 33761 | || |||||| | ||||||||||| ||| |||| | ||||||||||||||||||||| Sbjct 22717134 AGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCACCGGGAT 22717193 Query 33762 TCGCAGTTCGTGGCAGAACTTCTCGGCCTCGCCGTCCACCGCGCTAGCCAGCTCCCGCAG 33821 |||| || |||| ||||| ||||||| | | ||| ||| | |||| |||||||| Sbjct 22717194 CCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTCCCGCAA 22717253 Query 33822 CAGCGTGGTGAACCGCCTGTCGGCGGGGGCCTCGGAGTACTTCCGTCCCGTCAGAGCGAG 33881 | | |||||||||| |||| |||| |||| || ||| | || || ||||| || | Sbjct 22717254 GAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAGGGCCAA 22717313 Query 33882 GTACGAAGCCACACCCAGGTGTCCGACACCGATCCGTCGGTTCCTGTCCAGAACCTCCCG 33941 || || ||||| || ||||| || |||||||| || ||||| | ||||||||||| || Sbjct 22717314 ATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAACCTCTCG 22717373 Query 33942 GCTCTTCGGATCAGCGACTTTCGAGAAGGTGGCGCGGATCAGGAACCGAGTCATCAGCCG 34001 |||||||||||||||||| ||||| || || |||||||||||||| |||||||| || Sbjct 22717374 GCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCATCAGACG 22717433 Query 34002 ATGCGCTGTCAGCAGACCGAGATAGTCGGTCTTGCCGTTCTCCGAGACGAACGCGGCCAG 34061 || ||| | ||| ||| ||||||||||| ||| || | ||||||||| || || Sbjct 22717434 GTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGGCGTCGGTGACGAACGCCGCGAG 22717493 Query 34062 GTTGACGTGACCCAGGTTGCACGGCTCCCACGGCTCCAGCGTGATCTCACCGCACGGGTT 34121 ||||| ||| || |||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 22717494 GTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCCGCACGGGTT 22717553 Query 34122 GGTGCACACCACCTGGTTCGGCTCACCGACGTTGGACAGCGAGGAGTCCCATATCCCCGG 34181 |||||| || |||| ||| |||||||||||||||||||| | |||||| |||||||| Sbjct 22717554 GGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCACATCCCCGG 22717613 Query 34182 CTCGCCGTTGGCGAGCATC-CCGGCGGTGATGGCGTTGAGGCAATTGCGAGCGATTTGCG 34240 ||||||||| ||| | | || ||| || || || | || || | ||| Sbjct 22717614 CTCGCCGTT-GCGTACGGCTCCCTCGGAGAGAGCCTTCA-------GCACCCGGTGTGC- 22717664 Query 34241 ACAGACACCGACCTGC-CAGGTCGAGCGGCTCG------GACTTGACGTGCGCCCAGAAC 34293 | || || | ||| |||||| ||| | |||| | | ||||||| Sbjct 22717665 -----CTTCGTGGAGCGCGGGTTGAGCGGGTCGACAGGAGCCTTGGCCAGGCTCCAGAAC 22717719 Query 34294 TCGTCATCGACCTCGACCGAGATGTTCGTCGTCCAGTGCTCACCAGACTCCGACTTG--- 34350 | || || |||||||||||||||||||| |||||||| || ||| |||| Sbjct 22717720 GCATCGTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATG 22717779 Query 34351 --------------CA-------CCGCAG-----------------AAACTCCTCGATCT 34372 || |||| | ||| |||| || Sbjct 22717780 TTGGTGAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCT 22717839 Query 34373 GCCAGTCAGCCCAGTGCATCATCGACATCCGCGCCGACCGGCGCACACCACCGGCCACCA 34432 ||||||| |||||||||||||||| ||| || ||||||||||| ||||| |||||||||| Sbjct 22717840 GCCAGTCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCA 22717899 Query 34433 CACACTGTGCGATAGCGTGGTCGATCTTCATCGCGTCCATGCCGGTCAGC-CACC 34486 ||||||| ||||| ||||||||||||| |||||| || | ||||||||| |||| Sbjct 22717900 CACACTGCGCGATGGCGTGGTCGATCTCCATCGCATCGAGACCGGTCAGCGCACC 22717954 Score = 378 bits (418), Expect = 2e-100 Identities = 410/541 (76%), Gaps = 2/541 (0%) Strand=Plus/Plus Query 42296 CGCGACTGCATACACGCCAAGCTGTAGCGAATCGGACGGAAGTTTGCCGGTCTTGTAGTC 42355 ||||| || |||||||| ||||| | || ||| | || |||||||||||||| Sbjct 22718250 CGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTC 22718309 Query 42356 ACGGACCCTCAGCCTGCCGTCTACCACCACGACCGCGTCGATGACGCCTTTGACCGGGAC 42415 ||||| | ||| ||||| ||||| ||||| ||||||||| || ||| ||| Sbjct 22718310 CCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGATGTATCCGCGAACCAGGAT 22718369 Query 42416 TCCGTCCAGGTCGATCTCAAACCCAAGCTCGATGGCCGGCGTGCCATCAGGCGTCTCCCA 42475 ||||| || |||||||| || |||||||| || ||||| || || || ||| |||| Sbjct 22718370 CCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCA 22718429 Query 42476 AATCTCCTGGCCGACGGTCTCGCGCCAGGCGACGAACTTCTCGACCTGCTCCATGCCCA- 42534 ||||||||||| ||||| ||||| |||| |||||||||||||||||||| ||| | Sbjct 22718430 GATCTCCTGGCCCGGAGTCTCCCGCCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGAC 22718489 Query 42535 GATGAAACCGTCGCTCCAGGTCTCGCTCACCGTTGTATGGCCCGCTCCACGTCCACCAGT 42594 | || |||| ||||| | |||||||| ||||||||| || || |||||||||||| | Sbjct 22718490 GGTG-TACCGGCGCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACT 22718548 Query 42595 CGAAGTTGGGAGTCTCTGCTGTAAAGGCAGCGACATCTTTAGAGTAGAAGTGTCTGAACA 42654 ||||||| || ||||| | || ||||| | || || || | |||| | ||||| Sbjct 22718549 CGAAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACA 22718608 Query 42655 TGTCCTGGGCCTCGTCCAGCGTCAGCGGCATCCCGTAGGACAACCAAATCTCGTACGCCT 42714 |||||| ||||||||| |||||||||||||| ||||||||| ||| | |||| ||||| Sbjct 22718609 TGTCCTTGGCCTCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCTCGACCGCCT 22718668 Query 42715 CGGCCACGGTGTGGAATGCGGTGCCCTGCGGCAGCCAAGCCGCAGGGCGTGACCACACCT 42774 | || || | |||||| || || |||||||||||||| ||||| || || |||||||| Sbjct 22718669 CAGCGACAGCGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCT 22718728 Query 42775 TGTCTATCCGTTGCAGCTTGTACGCCATCGGACACTTGAGGTACAGGTGCAACTGGCTAA 42834 |||| ||||| ||||||||||||||||| ||||| |||| ||| | |||||| | Sbjct 22718729 TGTCGATCCGAGCGAGCTTGTACGCCATCGGGCACTTCGTGTACTGGTTGATCTGGCTCA 22718788 Query 42835 C 42835 | Sbjct 22718789 C 22718789 >seq1 Length=46747018 Score = 502 bits (556), Expect = 8e-138 Identities = 692/951 (73%), Gaps = 34/951 (4%) Strand=Plus/Minus Query 589 CCCGGTTGCGTTGGCAGGGCGACTGAGGTCGACCACAAAAAGCGCGGGAACGACCATTCG 648 ||||| ||||| | || || || || |||||||| |||| ||||||||||| ||| Sbjct 34905202 CCCGGCTGCGTCCGGGCTGCCACCGACGTAGACCACAAGAAGCCAGGGAACGACCACTCG 34905143 Query 649 AGGTCCAACCTCCGCGCCGCGTGCTCCTACTGCCACGGCAAGAAGTCATCCGCAGAAGGC 708 |||||||||| | || ||| ||||||||||||||||||| |||| || ||| Sbjct 34905142 CGGTCCAACCTGCAAGCGATCTGCCGTGTCTGCCACGGCAAGAAGTCAGCCGCTGAGGGC 34905083 Query 709 GTAGCACGCAGACGGCAACTGAAGGCCCAGAGGAAGCGAGCACCCGAACGCCACCCTGGG 768 ||||| || | ||| |||| ||||||| |||||||||| || |||||||||||||| Sbjct 34905082 GTAGCCCGACGGCGGGAACTCAAGGCCCGGAGGAAGCGACCAGAACAACGCCACCCTGGG 34905023 Query 769 CGTTTCTA-GCGGGCCAGGTGCCCGCTCTACACCCAGGAGGTGATCAATGGGCACGCGAG 827 ||| || |||||||||||||| |||| |||||||||||||| | ||||||| || | Sbjct 34905022 CGTCGTTAAGCGGGCCAGGTGCCTGCTC--CACCCAGGAGGTGA-CTGTGGGCACACGCG 34904966 Query 828 GCCCAATCGGGAAACGAGACGAGGAGCGGGTCAGACGCAACAAGCCCGATACGCCGACCG 887 |||| ||||| ||||| ||||| || || || | ||||||| || || | ||||||| Sbjct 34904965 GCCCCATCGGAAAACGCGACGAAGAACGCGTTCGTCGCAACACCCCGGAGAACCCGACCG 34904906 Query 888 AGACGGTCGTCGTCCA-CGGAGCTGTCCAGATCCCAGAACTCGGAGACATCTCGTACTTC 946 | ||| || ||| | ||| | || ||||||| |||||||| ||||| ||| | Sbjct 34904905 AAACGATC-TCGATGATCGGGACGGTGGAGATCCCGGAACTCGGCGACATGAGCTACATG 34904847 Query 947 GGCGAGACACACCCTCTCGTCATCGATCTGTACGAGTCGATCAAGAAGTCGGCAGCCGTC 1006 |||||||| || || ||| || || ||||||| |||||||| | ||||||||||| Sbjct 34904846 GGCGAGACCCATCCGCTCATCGAAGAGATGTACGACGCGATCAAGCAATCGGCAGCCGTG 34904787 Query 1007 CGGTTCTACGAGCCAACCGACTGGCAGTACGCCAGGCTGACGCTGTTCACGCTTAACCAA 1066 ||||||||| || ||||||||||||| ||| | || | || | ||| || |||||| Sbjct 34904786 AAGTTCTACGAACCGACCGACTGGCAGTTCGCTCGCCTCGCTCTCTACACACTGAACCAA 34904727 Query 1067 GAACTCATCAACGCACAGCACCACGGCAAGCCCGTTGGTGCCATGAAGCTGACCGCAATC 1126 ||||||||| || ||||||| ||||||||| | ||||| |||||||||||||| ||| Sbjct 34904726 GAACTCATCGCGGCCAAGCACCAGGGCAAGCCCATCGGTGCGATGAAGCTGACCGCGATC 34904667 Query 1127 AACCAGATGCTCTCCTCGCTGCTGCTGACCGAGGGTGATCGACGCCGCGTTCGACTAGAA 1186 ||||||||||||||| | |||||||||||||| || || || || || || || || || Sbjct 34904666 AACCAGATGCTCTCCGCACTGCTGCTGACCGAAGGCGACCGGCGACGGGTCCGCCTGGAG 34904607 Query 1187 GTCGAACGACAGACCGGTGACTCCCCGACCGGC---AAGGTGCTCGACATGACCGACGTG 1243 |||| ||| ||| ||| ||||||||| ||||| | ||| ||||||||||| Sbjct 34904606 ATCGAGCGAGCACCCGCCGAC---CCGACCGGCGGGAAGGTCGTTGACGTGACCGACGTG 34904550 Query 1244 CTCAAGCAGCGCCTCGCCAAGTCCCAGGCGAGCGGAGGATGA----GCCTCAGGAGGGGG 1299 ||||||||||||||||||||| | ||| |||| || ||| || | || |||| Sbjct 34904549 CTCAAGCAGCGCCTCGCCAAG--GCGAGCG-GCGGGGGGTGATGGTCCCCCTGGCGGGGT 34904493 Query 1300 T-TGAGCCGCTGCCGCT-CCAGCCGCTCCCCCCTCCTGAGAT--------GAGCTTGAAA 1349 | ||||| | ||||||| || | |||||||| | | | | || ||||||| Sbjct 34904492 TCTGAGCGGTTGCCGCTACCGACTGCTCCCCCGCCGGGGGTTGACCCTCCGAACTTGAAA 34904433 Query 1350 GGAACC-CACCGTTGACTATCGGCACCCCCGTAGATCCAGACACACTCGTTCTGACCCGA 1408 ||| || || | ||| |||||| ||| | || | || | ||| ||| | Sbjct 34904432 GGATCCGCATGGCCGAC-CTCGGCAACCCGTTCGACCTGGAGATGCTCTGCCTGGTCACC 34904374 Query 1409 GGCCGGGACTTCGAGTGGACCTTCCAGAACCTTGA-CGAGTCA--GGGGATCCCATCAAC 1465 ||||| |||||| ||| | ||| |||| || | |||| | | |||| | | Sbjct 34904373 GGCCGCGACTTCCGCTGGTCGATCCCCCACCTCGACCCGGTCACCAAGCAGCCCACCCCC 34904314 Query 1466 TTCCCCGCCGGCAACCTGTTCTTTGAACTGCAAACCGGCGGAGAACACAAC 1516 | || || ||| |||||||| | |||||| | || ||||| || |||||| Sbjct 34904313 TGGCCTGCGGGCGACCTGTTCCTCGAACTGGAGACGGGCGGCGAGCACAAC 34904263 Score = 114 bits (126), Expect = 4e-21 Identities = 133/176 (76%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 5711 TGTAGCTCAATCGGCAGAGCGGCTCCCTGTTAAGGAGTTGGTTGGAGGTTCGAGTCCTCC 5770 ||||||||||| |||||||| | ||||||| | ||||| ||||||||||||| | Sbjct 34903441 TGTAGCTCAAT-GGCAGAGCATCCGGCTGTTAACCGGACGGTTGAAGGTTCGAGTCCTTC 34903383 Query 5771 CAGATCAGCCA--CGGTCGGTGCTCTATCTCACGGG-AGCACCACCGCCAAGCGTTCCTA 5827 | ||||||| ||| |||| | | | | ||| ||| || | ||||| | || Sbjct 34903382 CTCGTCAGCCAAGCGGGCGGTTCCCCAGAGCGTGGGGAGCCCCCGCACCAAGTACACGTA 34903323 Query 5828 GCTCAATTGGTAGAGCGACGGTCTCCAAAGCCGTTGGTTCCAGGTTCGAGTCCTGG 5883 |||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct 34903322 GCTCAATTGGTAGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTGG 34903267 Score = 82.4 bits (90), Expect = 2e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 2570 ATCGAAGGCGACGCAGCCTCGCTGAAGGTCGAGTCCGAAGAGGTCGACACCATCGGCAAC 2629 ||||| |||| | |||||| | ||||||||||||||||||| ||||| ||| ||| Sbjct 34903608 ATCGACGGCGTGACCGCCTCGATCAAGGTCGAGTCCGAAGAGGCCGACAAGATCCCGAAC 34903549 Query 2630 CGCACCCCGTGGCATTTGGTGTTCCTGCCCGACGGCGAAGAGGCCGGCgg 2679 ||| || ||||| ||||| ||||| |||||||| ||||||||| Sbjct 34903548 CGCTGCCGCTGGCAGTTGGTTCATCTGCCGACCGGCGAAGCGGCCGGCGG 34903499 >seq9 Length=46179939 Score = 378 bits (418), Expect = 2e-100 Identities = 410/541 (76%), Gaps = 2/541 (0%) Strand=Plus/Minus Query 42296 CGCGACTGCATACACGCCAAGCTGTAGCGAATCGGACGGAAGTTTGCCGGTCTTGTAGTC 42355 ||||| || |||||||| ||||| | || ||| | || |||||||||||||| Sbjct 16532094 CGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTC 16532035 Query 42356 ACGGACCCTCAGCCTGCCGTCTACCACCACGACCGCGTCGATGACGCCTTTGACCGGGAC 42415 ||||| | ||| ||||| ||||| ||||| ||||||||| || ||| ||| Sbjct 16532034 CCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGATGTATCCGCGAACCAGGAT 16531975 Query 42416 TCCGTCCAGGTCGATCTCAAACCCAAGCTCGATGGCCGGCGTGCCATCAGGCGTCTCCCA 42475 ||||| || |||||||| || |||||||| || ||||| || || || ||| |||| Sbjct 16531974 CCCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCA 16531915 Query 42476 AATCTCCTGGCCGACGGTCTCGCGCCAGGCGACGAACTTCTCGACCTGCTCCATGCCCA- 42534 ||||||||||| ||||| ||||| |||| |||||||||||||||||||| ||| | Sbjct 16531914 GATCTCCTGGCCCGGAGTCTCCCGCCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGAC 16531855 Query 42535 GATGAAACCGTCGCTCCAGGTCTCGCTCACCGTTGTATGGCCCGCTCCACGTCCACCAGT 42594 | || | ||| ||||| | |||||||| ||||||||| || || |||||||||||| | Sbjct 16531854 GGTGTA-CCGGCGCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACT 16531796 Query 42595 CGAAGTTGGGAGTCTCTGCTGTAAAGGCAGCGACATCTTTAGAGTAGAAGTGTCTGAACA 42654 ||||||| || ||||| | || ||||| | || || || | |||| | ||||| Sbjct 16531795 CGAAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACA 16531736 Query 42655 TGTCCTGGGCCTCGTCCAGCGTCAGCGGCATCCCGTAGGACAACCAAATCTCGTACGCCT 42714 |||||| ||||||||| |||||||||||||| ||||||||| ||| | |||| ||||| Sbjct 16531735 TGTCCTTGGCCTCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCTCGACCGCCT 16531676 Query 42715 CGGCCACGGTGTGGAATGCGGTGCCCTGCGGCAGCCAAGCCGCAGGGCGTGACCACACCT 42774 | || || | |||||| || || |||||||||||||| ||||| || || |||||||| Sbjct 16531675 CAGCGACAGCGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCT 16531616 Query 42775 TGTCTATCCGTTGCAGCTTGTACGCCATCGGACACTTGAGGTACAGGTGCAACTGGCTAA 42834 |||| ||||| ||||||||||||||||| ||||| |||| ||| | |||||| | Sbjct 16531615 TGTCGATCCGAGCGAGCTTGTACGCCATCGGGCACTTCGTGTACTGGTTGATCTGGCTCA 16531556 Query 42835 C 42835 | Sbjct 16531555 C 16531555 Score = 89.7 bits (98), Expect = 2e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 41498 CGCCCGCTGCTCGTCGTCCATCGCTTTCTTTACCGCTCCCATGAGCTGGGTTGCCCGCAT 41557 |||| |||||| ||||||||||| || | | ||| || ||||| | || | Sbjct 16532850 CGCCGCCTGCTCCGCGTCCATCGCTCGCTGGATCTGGTTCATCAGTTGGGTGCCTCGAAG 16532791 Query 41558 ATTCAGCAGTGACATCGTCTCCATACCGCTGAACCCTGCTCTCTGCATCCGCAGCACCGC 41617 |||||||| ||| || | ||| |||| || ||| ||||||||||| ||||| Sbjct 16532790 CTTCAGCAGCTTCATGGTGTGAGCACCCTTGAATCCGACTCGGTGCATCCGCAGGACCGC 16532731 Query 41618 TGCGGTCTCATGCGGTGCCAACGGAGACTTGAGCATGGGATCGTCGGGATCCCAGTC 41674 || ||||||||||| || |||| ||||| ||| | || |||| ||||||||| || Sbjct 16532730 CGCCGTCTCATGCGGCGCGTACGGCGACTTCAGCTTCGGGTCGTTGGGATCCCAATC 16532674 >seq14 Length=60807478 Score = 100 bits (110), Expect = 9e-17 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 21409 CCGTTCCCGCCTGGTGTCCCGATCCCGTGGGAGAGAGCGCCTTACACGCAGTTCGTCATT 21468 ||||||||||| || ||| |||||||||||||| || || | ||||||||||||||| Sbjct 27571939 CCGTTCCCGCCGGGAGTCGAGATCCCGTGGGAGACCGCTCCGTTCACGCAGTTCGTCATC 27571880 Query 21469 CCGGACTACTCGTTCGAGGATCCAGAGTTCCGCAACCG 21506 |||||||||||||||||||| ||| || |||||| Sbjct 27571879 CCGGACTACTCGTTCGAGGACGAGGAGGTCGCCAACCG 27571842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161213365730560