Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_028685.1 Length=62851 Score E Sequences producing significant alignments: (Bits) Value seq477 129 2e-25 >seq477 Length=38297 Score = 129 bits (142), Expect = 2e-25 Identities = 217/309 (70%), Gaps = 14/309 (5%) Strand=Plus/Minus Query 6764 ACGTGAAGTAATCCCCAGCCAGGTGGTAAATCCTCAATTGAAATAATTCCCGGCTCACTA 6823 |||| || || |||||||| ||| | || || || || | ||| ||||| | Sbjct 36078 ACGTTCAGCAACCCCCAGCCCTCTGGCAGCTCATCGATGCGGATCAGTCCAGGCTCGCAG 36019 Query 6824 ATAAAGAATCGCCAGTCGCCCATTCCAAGAGACGGATTTTTACGGAAACGCTTTTTTCTA 6883 || ||||| ||||| || ||||| ||||| || | | ||||| |||||||| | Sbjct 36018 ATGAAGAAGCGCCAATCCCCCATGCCAAGCTCAGGCTGAATCCGGAATCGCTTTTTCCGG 35959 Query 6884 TCTGCCAACAAGTCAGCACGAGAACACTTCGCCTCTATCAGGCATGATGCTGAATTTCTG 6943 || || | |||||| | |||||||||||||| || |||||||| || ||| ||| | | Sbjct 35958 TCGGCAAGGAAGTCACCTCGAGAACACTTCGCTTCGATCAGGCAGGAGGCTAGATTACGG 35899 Query 6944 AATCCCATAGCATCTGGCTGTTCTCCGGTACTGGTTA---CGGCTATAAAGCGGTCAT-G 6999 ||||| || || || |||||||| |||| ||| || |||| | |||||| |||| | Sbjct 35898 AATCCAATTGCGTCAGGCTGTTCGCCGG---TGGATACAGCGGCAACAAAGCGATCATGG 35842 Query 7000 AAAGCAAACCTTGAACCCG---TTGCGCTTAAGGAACTTGTACGCAATCTGACAGAGTTC 7056 ||||| ||| ||| ||| |||||| |||||| | |||||| | || || || Sbjct 35841 AAAGC-GACCGAGAAACCGTTATTGCGC---AGGAACCGTTCGGCAATCAGGCAAAGCTC 35786 Query 7057 TCGGTGTGT 7065 | |||||| Sbjct 35785 GCTGTGTGT 35777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200995029256832