Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_028791.1 Length=44492 Score E Sequences producing significant alignments: (Bits) Value seq9 120 9e-23 >seq9 Length=46179939 Score = 120 bits (132), Expect = 9e-23 Identities = 139/185 (75%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 30257 CGTCGTGCGGTCCGCGCTCGACGATCTGCCCGACTCGAAGCTGCTGCGCATCGCGGCGAC 30316 || ||| || | ||||||||||| ||| |||| ||||||||||| |||||| ||||| Sbjct 27699269 CGACGTCCGCGCGGCGCTCGACGACCTGTCCGATTCGAAGCTGCTCAACATCGCCGCGAC 27699210 Query 30317 CATCATCACCGGCTGGAAGCCGATCCTGCTGTCGTCGGCCGCGGCTGCGCTGACCGACGT 30376 ||||||| |||||||||| ||||| ||||| | | | |||| | ||||||||||| Sbjct 27699209 CATCATCGCCGGCTGGAAACCGATTCTGCTCAAGAC--CACCGGC-GATCTGACCGACGT 27699153 Query 30377 GGACCTGTTCATCCAAGCGCTGCGCGATCGCGCCGACCAGTTCGAGGCCGTCGAGCGCGA 30436 ||| | | || | || |||||||||||||| ||| | || | ||| |||| ||| Sbjct 27699152 CGACGTCCTGGTCGACGCTCTGCGCGATCGCGCAACCCAATACGCCGTCGTAGAGCTCGA 27699093 Query 30437 CGCCG 30441 || || Sbjct 27699092 CGACG 27699088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142250475589248