Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_028798.1 Length=50882 Score E Sequences producing significant alignments: (Bits) Value seq18 453 4e-123 seq8 376 8e-100 seq9 295 2e-75 seq1 196 2e-45 >seq18 Length=36757632 Score = 453 bits (502), Expect = 4e-123 Identities = 624/876 (71%), Gaps = 70/876 (8%) Strand=Plus/Plus Query 34364 CATCGACAACCGAACTCGCCGGATGAAGTAGCGCGAGAAGATCGGGTGAATCCCCTCGGA 34423 || ||| ||||| | |||||||||||||| || |||||||||||||| || ||||| Sbjct 22717068 CACCGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACT 22717127 Query 34424 GACACCAGGCATCTTCGCGATGGTCCCCGTGGGGGCCACCGTGCGCTTCTTCACGGGCAC 34483 ||| ||||||||||||||||||||||| || |||||||||||||||||||| || ||||| Sbjct 22717128 GACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCAC 22717187 Query 34484 CGGGATGCGGAGCTGGTGAGCGAACTCCTCAGCGGCCTTGTCGACCTCATGGGCCAAGTG 34543 |||||| || | || || ||||||||| || || ||||||||||| ||||| | Sbjct 22717188 CGGGATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTC 22717247 Query 34544 CCGCAGCACGTCCCGGAACGGACTG--GCCGGG-GCCTCGGAGTACCTCTTGCCGGTCAT 34600 ||||| | | |||| | || ||||| |||| || ||||| ||| |||| Sbjct 22717248 CCGCAAGAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAG 22717307 Query 34601 CGCCAGGAACGAGGCCACACCAAGGTGGCCGACGCCGATCCGGCGGTTCCGGTCCAGCAC 34660 |||| | |||||||| || ||||| || || ||||| || ||||| || ||||| || Sbjct 22717308 GGCCAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAAC 22717367 Query 34661 CTCCCTCGACTTCGGGTCCGCGACCTCCGAGAAGGTCGCCCGGATCAGGAACCGGGTGAT 34720 ||| | |||||| || |||||| | ||||| |||||||||||||||||||| || || Sbjct 22717368 CTCTCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCAT 22717427 Query 34721 CAGCCTGTGCGCCTTGTACAGCCCGAGGTAGTCCACCTTGTTGGTGTCCTCCCGGACGAA 34780 ||| | ||| || | ||| ||| |||||| ||| || | || |||||| Sbjct 22717428 CAGACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGG---CGTCGGTGACGAA 22717484 Query 34781 CGCGGCCAGGTTGACGTGGCCCAGGTTGCAGGGCTCCCACGGTTCGAGCGTGATCTCGCC 34840 ||| || ||||||| ||| || |||||||||||||||||||| || ||||||||||| || Sbjct 22717485 CGCCGCGAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCC 22717544 Query 34841 ACACGGGTTGGTGCAGACGACCTCGTTGGGCTCCCCGACGTTCGACAGCGACGAGTCCCA 34900 |||||||||||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct 22717545 GCACGGGTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCA 22717604 Query 34901 GAAGCCAGGCTCGCCGTTGGCGACCATGCCCTCGGTGA---TCTT--GCGGAGGATGTAC 34955 | || |||||||||||| || ||||||| || ||| || | ||| | Sbjct 22717605 CATCCCCGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGC 22717664 Query 34956 --TC--------CGCGTTGCCACCGCCGA------TCTTCACCGCGTCCCAGAAGTCCTG 34999 || || |||| | ||| ||| || | |||||| | | Sbjct 22717665 CTTCGTGGAGCGCGGGTTGAGCGGGTCGACAGGAGCCTTGGCCAGGCTCCAGAACGCATC 22717724 Query 35000 GTCGACCTCCACCGAGATGTTCGTCGTCCAGTGCGACCCGGTGTCGGCCTTGATCCCGAC 35059 ||| ||||| |||||||||||||| |||||||| || ||| |||| |||||| | Sbjct 22717725 GTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGT 22717784 Query 35060 GAAC-----------------CGGTC------GAT------------------CTGCGGG 35078 |||| | ||| ||| |||| | Sbjct 22717785 GAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCTGCCAG 22717844 Query 35079 TCGTTCCAGTGCATCATCGCCATGCGAGCCGAGCGGCGAACGCCGCCAGCGACCACACAC 35138 || ||||||||||||||||||||||||||| |||||||| || || || ||||||||| Sbjct 22717845 TCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCACACAC 22717904 Query 35139 TGCGCGATGGCGTGGTCGATCCCCATCGC--CGAGA 35172 ||||||||||||||||||||| ||||||| ||||| Sbjct 22717905 TGCGCGATGGCGTGGTCGATCTCCATCGCATCGAGA 22717940 Score = 392 bits (434), Expect = 1e-104 Identities = 320/388 (82%), Gaps = 3/388 (1%) Strand=Plus/Plus Query 48525 GAGAAGAGCACCGACTTGCGTCCGTTGATGCAGAGCCCGCAGCGAGCGCAGGCTGAACCC 48584 ||||| || || |||||||||||||||||| || ||||| | ||||||||| || ||| Sbjct 22719949 GAGAACAGAACGCTCTTGCGTCCGTTGATGCACAGACCGCACCTAGCGCAGGCCGATCCC 22720008 Query 48585 TTGTCGCTGATCAGCTCGATGGCTTTGTTGTTC---TCCGGGCACCGCGTGGCGTTCGGG 48641 ||| || ||||||| |||| | || ||||||| |||||||| ||| ||| ||||| Sbjct 22720009 TTGGCGTTGATCAGGTCGAAGTCTCGGTTGTTCAGCTCCGGGCAGCGCACGGCCGTCGGG 22720068 Query 48642 AACTGCGCCTTGCCTTCTGCGAAGGTCTGGTCGACGTAGGCGATGTTGATGCCCTTGCCT 48701 ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 22720069 AACTGTGCCTTGCCTTCGGCGAACGTCGTGTCGACGTAGGCGATGTTGATGCCCTTGCCT 22720128 Query 48702 TCGAGGAACCGTGCGACCTCGATGTTGTCTCGATCCGCGCTGAAGTAGAGCGCGAGGTTC 48761 || |||||||| || || || | |||||| |||||||||||||||| |||| |||||| Sbjct 22720129 TCCAGGAACCGGGCCACGTCTACGTTGTCGGGATCCGCGCTGAAGTACAGCGACAGGTTC 22720188 Query 48762 GACAGCTTCTGCGCGTGCAGGAACACGGCTGCCGTCTGAACCCTTGTGTATGCCCAGAAC 48821 ||||||||||| | ||||||| | || ||||| ||||||||||| ||||| ||||||||| Sbjct 22720189 GACAGCTTCTGTGAGTGCAGGTAGACCGCTGCGGTCTGAACCCTGGTGTAGGCCCAGAAC 22720248 Query 48822 TGCACGTCCGGGTTGTCGGCGATGACTTTCGCCCAGGCGGTGACGTACGTCGGGCTGAAG 48881 |||||||| | ||| |||||| |||||| || | |||||| |||||||||||| Sbjct 22720249 TGCACGTCGCTGAAGTCTCGGATGACACGCGCCCACGCTGCGACGTAGGTCGGGCTGAAG 22720308 Query 48882 AAGTCTCCGTCCCAGTGGATGCGGAACA 48909 ||||| || ||||||||||| ||||||| Sbjct 22720309 AAGTCGCCATCCCAGTGGATACGGAACA 22720336 Score = 295 bits (326), Expect = 2e-75 Identities = 534/767 (70%), Gaps = 22/767 (3%) Strand=Plus/Plus Query 43260 GTAGCTCACGTCGCAAAAAGCGCACTTGTCCGGCTCTGGGTCCGGGTCAAAGCGCTCGGC 43319 |||| ||| || || || ||| |||||||| || || |||||| || | ||| Sbjct 22718031 GTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAACATCGAGGC 22718090 Query 43320 GGCGATGTTCTCTTCCAGTTCGCGGAACTTCTCCGCGACTCTCTCGCGGGGCCACTCCCC 43379 ||||| || || | | |||||| ||| | || || || | ||||| | Sbjct 22718091 TGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGT 22718150 Query 43380 CAAGTCGTAGGGGTACGTCGGCTTGC---CCTTCACACCTTTCTTCCCGGCCATGTAGTA 43436 || ||||||||| | |||||||| |||| || |||||||| ||||| |||| Sbjct 22718151 CAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTTG---CCCTTCTTCCCCACCATGAAGTA 22718207 Query 43437 GTCCCCGATCTGCGGGGGCTCGATGCCGTAGGTCTCGGCCAGGGCAA-CGCTGTAGACGC 43495 ||| ||| ||| ||| | ||||| ||||||||| || | || | ||| ||| |||| Sbjct 22718208 GTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCGC-GTACACGC 22718266 Query 43496 CAAGCTGGAAGTCGTCGCCGGGGGTGTTGCCGGTCTTGTAGTCCCGGACGATCACGTTGC 43555 | |||||||||||||| || || ||| |||||||||||||||||||| | | | Sbjct 22718267 CGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCC 22718326 Query 43556 CGTCGCTGTCCCTCAGCACGGCGTCGATGTAGCCCCGGACCAAGACTCCGTCGAGGTCGA 43615 |||| | || | |||||||||||||| || || |||| || |||||||| |||| Sbjct 22718327 CGTC---GACCACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTCGAGCTCGA 22718383 Query 43616 TGTCGAAGCCCAGCTCGATGCCTGGGGTGCCGTCAGGGGCGATCCAGATGACCTCTTCGG 43675 | |||||| ||||||||| |||| || ||||| |||| | |||||| ||| | | Sbjct 22718384 TCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTCCTGGCCCG 22718443 Query 43676 GGTGGCCTTCGGTCCAGGCGAAGAACTTCTCGATCTGTTCGAGCCCGATGTGCCAACGGC 43735 | | || | | ||| |||||||||||||||| ||| || || |||| | | |||| Sbjct 22718444 G--AGTCTCCCG-CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGTGTACCGGC 22718500 Query 43736 GTTCGAGATCGCTCGCGCCGTCGTAGCGTCCCGACCGGAACCACCAGTCGAAGTTCGGGG 43795 | |||| || | | |||| ||| | || |||| |||||| ||||||||||||| Sbjct 22718501 GCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACTCGAAGTTCGGGG 22718560 Query 43796 TCACGTCGGTGTACTGCGAC-ACCTCTTTGGCGTACTCCTCCTTGAACATCTCCTGGGCC 43854 || | |||||| | || | || || |||||||| | | |||||| |||| |||| Sbjct 22718561 TCTCCTCGGTG-AAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATGTCCTTGGCC 22718619 Query 43855 TCTTCAAGGCTCATTGGATCACCGTCGAGTTCCC--GCCTGCGGTACTCCTCCAGGACGG 43912 || ||||| ||| || |||| | |||| ||| | | |||| ||| | Sbjct 22718620 TCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCT--CGACCGCCTCAGCGACAG 22718677 Query 43913 TGTGGACTGCGCTCCCCTGCGGGAGCCAGGCGGCTGGCCTCTGCCATACCTTGTCGACGC 43972 ||||| || |||||||||| |||||||| ||||||| |||||| |||||||||| | Sbjct 22718678 CGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTTGTCGATCC 22718737 Query 43973 GGGCCAGCTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGAGCTG 44018 | || |||||||| || | |||||| | |||||| |||| ||| Sbjct 22718738 GAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGATCTG 22718783 >seq8 Length=24646021 Score = 376 bits (416), Expect = 8e-100 Identities = 635/919 (69%), Gaps = 48/919 (5%) Strand=Plus/Minus Query 11593 GGCCTTCCTGACTCCCGAGCAGAGCCAGGACTACTTCGCGGAGATCGAGAAGACCTCGAT 11652 || || |||| ||||||||| |||| |||||||| ||| ||||||||||||||| Sbjct 19507252 GGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACCTCGAT 19507193 Query 11653 TGTCCAGCGGATCGCCCGCAAGGTCCCGATGGGTCCGACCGGCATCAGCATCCCCCACTG 11712 ||||||| | |||||| ||||| ||||||||| | || ||| | ||||| ||||| Sbjct 19507192 CGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCGCACTG 19507133 Query 11713 GACCGGTGCCGTCTCGGCGTCGTGGACCGGCGAGGCCGAGCGCAAGCCGATCACCAAGGG 11772 | ||| | ||| || ||||| ||| |||| || ||||| ||||||||||| Sbjct 19507132 GGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACCAAGGG 19507073 Query 11773 TTCGTTCGGCAAGCAGGAACTGGAGCCGGTGAAGATCACCACGATCTTCGCAGAGAGCGC 11832 | |||| | | ||| |||||| | |||||||||| | | || Sbjct 19507072 CAACATGACTTCGCAGACCATCGCGCCCCACAAGATCGCGACGATCTTCGTGGCGTCTGC 19507013 Query 11833 TGAAGTCGTGCGTCTCAACCCGCTCAACTACCTGAACACCATGCGGACCAAGATCGCCGA 11892 || ||| ||| |||||| |||||||||| |||||||| |||||| | || Sbjct 19507012 GGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTGGCGAC 19506953 Query 11893 GGCCATCGCGCTCAAGTTCGACGCGGCTGCCATCCACGGCATCGACAAGCCGTCTGCGTT 11952 ||| ||||| | |||||||| || || || ||||||| ||||| ||| |||| Sbjct 19506952 CGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGACA-GCC-----CGTT 19506899 Query 11953 CAAGGGCTACCTGGCCGAGACGACCAAGGTCGTGTCGCTGGCCGACACCAACCTGACCAC 12012 | | |||| | | |||| ||||||| | | ||| | || ||||||| | |||| Sbjct 19506898 CCCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACCACCGGTGCCAC 19506839 Query 12013 GGCGTCGGGTCCGCAGGGCAACGCCTACCTGGCGGTCAACAACGCCCTGTCGCTCCTGGT 12072 | | || || || ||| || || | |||| |||| || ||||| Sbjct 19506838 GAC--CGTGTACG-------------ACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGT 19506794 Query 12073 GAACAGCGGCAAGAAGTGGACCGGCACCCTGCTGGACAACGTCACCGAGCCGATCCTCAA 12132 |||| |||||||||||||||| |||||| |||||| || |||||||||||||||| || Sbjct 19506793 GAACGACGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAA 19506734 Query 12133 CACGGCGGTCGACGGCAACGGTCGTCCTCTGTTCGTGGAGTCGACCTACACCGAGCAGGT 12192 | ||| ||| |||||||| || |||||| | |||||||||||| ||| | Sbjct 19506733 CGGCGCGAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAGGCCGC 19506674 Query 12193 CGGCGCGATCCGTGAGGGCCGCATCCTGGGTCGTCCCACCTACGTCGCGGACAACGTGGT 12252 || || ||||| |||||| ||| | | ||||| ||| | || ||| |||| || Sbjct 19506673 GAGCCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGT 19506614 Query 12253 CAACGGCACCGTTGGCAACCGCGTGGTCGGCGTCATGGGCGACTTCAGCCAGGTCATCTG 12312 | |||||| || ||||||| ||||||| |||||| |||| ||||||| Sbjct 19506613 GGAGGGCACC-------AC-----GGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTG 19506566 Query 12313 GGGCCAGATCGGCGGTCTGTCCTTCGACGTGACCGACCAGGCCACCCTGGACTTCGGTGA 12372 ||||||||||||||||||||||||||||||||| || ||||| |||||| || Sbjct 19506565 GGGCCAGATCGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAAC-------- 19506514 Query 12373 GGAACAGGGCGGCGTGTGGGTGCCC-AAGCTGATCTCGCTGTGGCAGCACAACATGGTCG 12431 | |||| ||| | | |||| || | |||||||||||||||||||| | |||| Sbjct 19506513 ----CTGGGCACCGT-CGAGAGCCCGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCG 19506459 Query 12432 CTGTCCGTTGCGAAGCTGAGTTCGCGTTCATGGTCAACGACAAGGACGCGTTCGTGAAGC 12491 | |||||| ||| ||||||| ||||||| ||||||| || |||||||| | Sbjct 19506458 CAGTCCGTGTCGAGGCTGAGTACGCGTTCCACTGCAACGACGCCGAGGCGTTCGTCGCTC 19506399 Query 12492 TGACCGACCAGGTC-GCGG 12509 ||||| || |||| |||| Sbjct 19506398 TGACCAACGTGGTCAGCGG 19506380 Score = 322 bits (356), Expect = 2e-83 Identities = 530/756 (70%), Gaps = 39/756 (5%) Strand=Plus/Minus Query 10286 CGGACCTTCTACGACGCTCAACGCGCACTCCACCACCCGGAGCTGGACCCCAACGAGAGG 10345 ||||| ||||||||| | || ||| |||||||||||||||||| || |||||||||| Sbjct 19508613 CGGAC-TTCTACGACTCCCAGCGCAGACTCCACCACCCGGAGCTTCCCCGCAACGAGAGG 19508555 Query 10346 TTGCTGTCCGAGCTTCGGTTCGAGTGGTTCGTGCAGAACATGGAGCCCGCACGCGTCAAG 10405 |||| | ||| || | || ||||||||||| |||||||||||||||||| | Sbjct 19508554 TTGCGGAGCGACCTCCAGTGGGAGTGGTTCGTCAGGAACATGGAGCCCGCACGAAAGGGG 19508495 Query 10406 TTCTCCCAGGAGGAGGCCGGTGACGCAGGCGTGGCCCAGGTCGCGCTA-CGAGCAGTGCG 10464 || || |||| || | | | || | || || || | | | ||| ||||||| Sbjct 19508494 TTGTCGCAGGCCGACTCTCCTCAAGCTGCGGTCACCAAGCTGACCTTGGCGA-CAGTGCG 19508436 Query 10465 CGAAGTCGAGATGGCAGGACGCCGACAGATCATCGGGGCGGTCAAAGACGACCCCGCTCC 10524 |||||| ||||||||||| ||||||||||||||||| || ||||| ||||||| ||||| Sbjct 19508435 CGAAGTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACCCAGCTCC 19508376 Query 10525 CCGCATCATTCGCGGGTGGGCGCGAGTGGCCACTGGTCGAGAGACCTGTGCCTGGTGCCT 10584 | ||| | || |||||| | || ||||| || || || || || |||||||| || Sbjct 19508375 TCAGATCGTGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCT 19508316 Query 10585 GATGCTCATCTCCCGAGGGCCTGTGTACCTCGGGGCCACCAACGCCGGCCTAGACCTCGA 10644 |||||| || ||||| || || | |||||| ||| | || || || ||||||| Sbjct 19508315 GATGCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGA 19508256 Query 10645 TGACGACTCGGCAGCCGAGAT---GATCGCTGCTGGT---------GAGGATGTCAGCGA 10692 ||| | | | ||| | || || ||||| ||| | || |||| Sbjct 19508255 CACCGAGACCGTGGTCGACCTCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTCCGCGA 19508196 Query 10693 GTA------------CATGGAGCAGTGGCACGCCGGGTGCGACTGCAAAGTGGTGCCGGT 10740 | ||| ||| |||||||||| |||||||||||| |||||||| || Sbjct 19508195 AGAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGT 19508136 Query 10741 CTTCAAGGTGGACGACTGGCCCGGTTTGGAAGCCCAGAAGCGGGCTCTCCGGTTGTGGAT 10800 |||| | ||||| |||||||||| || || ||| | || ||||| | | | ||||| Sbjct 19508135 CTTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGAT 19508076 Query 10801 CGACGCAGGGCGCGAAGCGTCCCGGTTGATCGAGTCGGGCAAGGCCCGGACCAACAACAT 10860 |||||| ||| ||||| || | | || | || ||||||||||| |||| ||| Sbjct 19508075 CGACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGA 19508016 Query 10861 GAACAAGGAGACGCAGAACGCGCTCCGTCGTCGCCTCGAACGGGGCGAAGTTCGC-ATGT 10919 ||||||||||||| ||||| |||||||| ||| | | || |||| ||||||| |||| Sbjct 19508015 GAACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCG-AGTTCGCAATGT 19507957 Query 10920 CCGAATTCGCTGCTGCTGCAGCGTAGTTCATCCCATCCAAGCCCCCAGGTGGGGCTGTCA 10979 |||| | ||| || || ||||| ||||| || | ||||||||||| ||| Sbjct 19507956 CCGACTACGC-ACT--CGCTGCGTA----ATCCC--CCGA-ACCCCAGGTGGGTTCATCA 19507907 Query 10980 CCTATGCCCAGGAGGCAATCCAACATGTCCGATACC 11015 | ||||||||||||| | |||||||||| ||| Sbjct 19507906 ACCATGCCCAGGAGGCGAAAACACATGTCCGACACC 19507871 Score = 114 bits (126), Expect = 4e-21 Identities = 201/288 (70%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 12890 GTCGAGCGGATGATCAAGCGGCGCATCCCGGACCTGGCCACCAAGGTCACCGACCCGGAC 12949 |||||||| |||||| ||| || ||||| || |||| | ||| ||| | ||||| Sbjct 19506045 GTCGAGCGCATGATCCGGCGTCGGATCCCAGATCTGGACGCCAGGGTGTCTT---CGGAC 19505989 Query 12950 TACCTC---GAAGACCTCAAGCAGGTCGAAGCAGATGCCGTTCTGCGGCTTGTCCGTAAC 13006 | || | || || | | |||| || || || || ||||| || || |||||| Sbjct 19505988 ATCTTCCGGGCCGATCTGATCGACATCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAAC 19505929 Query 13007 CCCGAGGGCTACCTGTCGGAGACCGACGGCAACTACACGTACATGCTCCGGTCTGACCTC 13066 || ||||||||||| |||||||||||||| ||||| ||| ||||| | |||| || Sbjct 19505928 CCGGAGGGCTACCTCTCGGAGACCGACGGGGCGTACACCTACCAGCTCCAGGCTGATCTG 19505869 Query 13067 GC-CAGCGGGAAGCTGGAGATCTTCCCCGAGGAGTGGGAGATCCTGGG---CTACCGCAG 13122 | ||| || ||||| | ||| | ||| |||||| || | |||| | |||| Sbjct 19505868 TCTCAG-GGCAAGCTCGTCATCCTTGGCGAAGAGTGGACGACCTTGGGAGTCAACCGACT 19505810 Query 13123 ATCTCGCATGACGGTGATCGTCCCGAATCCGGTGATGCCGACATGAGC 13170 || |||||| | ||||||||||| ||||||||||||||||| Sbjct 19505809 CTCGCGCATGTCCACCATCGTCCCGAACATCGTGATGCCGACATGAGC 19505762 Score = 80.6 bits (88), Expect = 9e-11 Identities = 117/166 (70%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 13295 GATGAGCCTTCTCGATGGCGGTCCCGCCTACGAGGACGTGATCGTCTACCCCGAAGAGGT 13354 ||||||||| |||||| ||| || ||| || ||| ||||||||||||||||| | Sbjct 19505574 GATGAGCCTCCTCGATACCGGAGCCCGGTACCAGCCGGTGCTCGTCTACCCCGAAGAGCT 19505515 Query 13355 CGTCACNNNNNNNNNNGGCAACACCCAGACCCGCCCATCCAAGACCGGCATCCCGGCCAA 13414 |||| || |||| |||||| || || |||||| |||| || | Sbjct 19505514 GGTCATCGACGCGGACGGGAACAAGAAGACCCAGCCGTCGAAGACCCCGATCCAAGCGAT 19505455 Query 13415 GGCGCGATTCCAGGT-GCAAGGCCAGTCCGGTACGTCAGCACGACG 13459 || || |||||||| || | ||||||||||||||| |||||||| Sbjct 19505454 CGCACGCTTCCAGGTCGCCA-ACCAGTCCGGTACGTCGGCACGACG 19505410 >seq9 Length=46179939 Score = 295 bits (326), Expect = 2e-75 Identities = 534/767 (70%), Gaps = 22/767 (3%) Strand=Plus/Minus Query 43260 GTAGCTCACGTCGCAAAAAGCGCACTTGTCCGGCTCTGGGTCCGGGTCAAAGCGCTCGGC 43319 |||| ||| || || || ||| |||||||| || || |||||| || | ||| Sbjct 16532313 GTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAACATCGAGGC 16532254 Query 43320 GGCGATGTTCTCTTCCAGTTCGCGGAACTTCTCCGCGACTCTCTCGCGGGGCCACTCCCC 43379 ||||| || || | | |||||| ||| | || || || | ||||| | Sbjct 16532253 TGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGT 16532194 Query 43380 CAAGTCGTAGGGGTACGTCGGCTTGC---CCTTCACACCTTTCTTCCCGGCCATGTAGTA 43436 || ||||||||| | |||||||| |||| || |||||||| ||||| |||| Sbjct 16532193 CAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTTG---CCCTTCTTCCCCACCATGAAGTA 16532137 Query 43437 GTCCCCGATCTGCGGGGGCTCGATGCCGTAGGTCTCGGCCAGGGCAA-CGCTGTAGACGC 43495 ||| ||| ||| ||| | ||||| ||||||||| || | || | ||| ||| |||| Sbjct 16532136 GTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCGC-GTACACGC 16532078 Query 43496 CAAGCTGGAAGTCGTCGCCGGGGGTGTTGCCGGTCTTGTAGTCCCGGACGATCACGTTGC 43555 | |||||||||||||| || || ||| |||||||||||||||||||| | | | Sbjct 16532077 CGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCC 16532018 Query 43556 CGTCGCTGTCCCTCAGCACGGCGTCGATGTAGCCCCGGACCAAGACTCCGTCGAGGTCGA 43615 |||| | || | |||||||||||||| || || |||| || |||||||| |||| Sbjct 16532017 CGTC---GACCACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTCGAGCTCGA 16531961 Query 43616 TGTCGAAGCCCAGCTCGATGCCTGGGGTGCCGTCAGGGGCGATCCAGATGACCTCTTCGG 43675 | |||||| ||||||||| |||| || ||||| |||| | |||||| ||| | | Sbjct 16531960 TCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTCCTGGCCCG 16531901 Query 43676 GGTGGCCTTCGGTCCAGGCGAAGAACTTCTCGATCTGTTCGAGCCCGATGTGCCAACGGC 43735 | | || | | ||| |||||||||||||||| ||| || || |||| | | |||| Sbjct 16531900 G--AGTCTCCCG-CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGTGTACCGGC 16531844 Query 43736 GTTCGAGATCGCTCGCGCCGTCGTAGCGTCCCGACCGGAACCACCAGTCGAAGTTCGGGG 43795 | |||| || | | |||| ||| | || |||| |||||| ||||||||||||| Sbjct 16531843 GCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACTCGAAGTTCGGGG 16531784 Query 43796 TCACGTCGGTGTACTGCGAC-ACCTCTTTGGCGTACTCCTCCTTGAACATCTCCTGGGCC 43854 || | |||||| | || | || || |||||||| | | |||||| |||| |||| Sbjct 16531783 TCTCCTCGGTG-AAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATGTCCTTGGCC 16531725 Query 43855 TCTTCAAGGCTCATTGGATCACCGTCGAGTTCCC--GCCTGCGGTACTCCTCCAGGACGG 43912 || ||||| ||| || |||| | |||| ||| | | |||| ||| | Sbjct 16531724 TCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCT--CGACCGCCTCAGCGACAG 16531667 Query 43913 TGTGGACTGCGCTCCCCTGCGGGAGCCAGGCGGCTGGCCTCTGCCATACCTTGTCGACGC 43972 ||||| || |||||||||| |||||||| ||||||| |||||| |||||||||| | Sbjct 16531666 CGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTTGTCGATCC 16531607 Query 43973 GGGCCAGCTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGAGCTG 44018 | || |||||||| || | |||||| | |||||| |||| ||| Sbjct 16531606 GAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGATCTG 16531561 Score = 275 bits (304), Expect = 2e-69 Identities = 224/271 (83%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 48525 GAGAAGAGCACCGACTTGCGTCCGTTGATGCAGAGCCCGCAGCGAGCGCAGGCTGAACCC 48584 ||||| || || |||||||||||||||||| || ||||| | ||||||||| || ||| Sbjct 16530395 GAGAACAGAACGCTCTTGCGTCCGTTGATGCACAGACCGCACCTAGCGCAGGCCGATCCC 16530336 Query 48585 TTGTCGCTGATCAGCTCGATGGCTTTGTTGTTC---TCCGGGCACCGCGTGGCGTTCGGG 48641 ||| || ||||||| |||| | || ||||||| |||||||| ||| ||| ||||| Sbjct 16530335 TTGGCGTTGATCAGGTCGAAGTCTCGGTTGTTCAGCTCCGGGCAGCGCACGGCCGTCGGG 16530276 Query 48642 AACTGCGCCTTGCCTTCTGCGAAGGTCTGGTCGACGTAGGCGATGTTGATGCCCTTGCCT 48701 ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 16530275 AACTGTGCCTTGCCTTCGGCGAACGTCGTGTCGACGTAGGCGATGTTGATGCCCTTGCCT 16530216 Query 48702 TCGAGGAACCGTGCGACCTCGATGTTGTCTCGATCCGCGCTGAAGTAGAGCGCGAGGTTC 48761 || |||||||| || || || | |||||| |||||||||||||||| |||| |||||| Sbjct 16530215 TCCAGGAACCGGGCCACGTCTACGTTGTCGGGATCCGCGCTGAAGTACAGCGACAGGTTC 16530156 Query 48762 GACAGCTTCTGCGCGTGCAGGAACACGGCTG 48792 ||||||||||| | ||||||| | || |||| Sbjct 16530155 GACAGCTTCTGTGAGTGCAGGTAGACCGCTG 16530125 >seq1 Length=46747018 Score = 196 bits (216), Expect = 2e-45 Identities = 175/212 (83%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 3837 CCATTGATCTGTAGCTCAATCGGCAGAGCACCCGGCTGTTAACCGGGACGTTGGAGGTTC 3896 ||| ||| ||||||||||| ||||||||| ||||||||||||||| |||| |||||| Sbjct 34903450 CCACTGACGTGTAGCTCAAT-GGCAGAGCATCCGGCTGTTAACCGGACGGTTGAAGGTTC 34903392 Query 3897 GAGTCCTCCCAGATCAGCCATGCGAGCGGTTCCTGCCGTATCG-GAGGAGCCCTCGCACA 3955 ||||||| || ||||||| ||| |||||||| || | || | ||||||| ||||| Sbjct 34903391 GAGTCCTTCCTCGTCAGCCAAGCGGGCGGTTCC--CCAGAGCGTGGGGAGCCCCCGCACC 34903334 Query 3956 TAGG-CACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTCG 4014 || ||||||||||||||||| ||||||| |||||||||||||||||| | |||||||| Sbjct 34903333 AAGTACACGTAGCTCAATTGGT-AGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCG 34903275 Query 4015 AGTCCTGCCGTGTCTGCAACCACCCAGTTCCC 4046 | ||||| ||||| ||| ||||||| ||||| Sbjct 34903274 ACTCCTGGCGTGTATGCCACCACCC--TTCCC 34903245 Score = 147 bits (162), Expect = 7e-31 Identities = 223/310 (72%), Gaps = 7/310 (2%) Strand=Plus/Minus Query 604 GCGGGCTGGATCTGTGAGATCGGTTGGTCCGGTTGCCTGCTTGAGGCGACCGAGGTCGAC 663 || || ||| | |||||| ||| | |||| ||| | | | || ||||| || ||| Sbjct 34905229 GCCGGGTGGCTGTGTGAGGTCGACGGCCCCGGCTGCGTCCGGGCTGCCACCGACGTAGAC 34905170 Query 664 CACATCCGTCGTGGTGACGACCATTCACGCGCCAACCTACGAGCCGCGTGCTC-GTCGTG 722 |||| | || ||||||| || || ||||||| | ||| ||| ||| || Sbjct 34905169 CACAAGAAGCCAGGGAACGACCACTCGCGGTCCAACCTGCAAGCGATCTGCCGTGTC-TG 34905111 Query 723 CCACGGCAAGAAGTCATCCGCTGAGGGCAACGCCCGGAAGCGGCAGTTACGAGCCAGGAG 782 |||||||||||||||| ||||||||||| ||||| |||| | | ||| |||| Sbjct 34905110 CCACGGCAAGAAGTCAGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGGAG 34905051 Query 783 GAAGCGACC-GACCGAACGCCACCCTGGCCG-CATATAGCGGGCCAGGAGCCCGCTGACC 840 ||||||||| || | ||||||||||||| || | | ||||||||||| ||| ||| || Sbjct 34905050 GAAGCGACCAGAAC-AACGCCACCCTGGGCGTCGTTAAGCGGGCCAGGTGCCTGCT--CC 34904994 Query 841 ACCCAGGAGGTGACAGTGGGCGAACGAGGCCCTGTGCGTAAACGGTCGGATCAACGCGTC 900 |||||||||||||| |||||| ||| ||||| | | ||||| || ||||||| Sbjct 34904993 ACCCAGGAGGTGACTGTGGGCACACGCGGCCCCATCGGAAAACGCGACGAAGAACGCGTT 34904934 Query 901 CGACGCAACA 910 || ||||||| Sbjct 34904933 CGTCGCAACA 34904924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162698141468928