Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_028860.1 Length=52392 Score E Sequences producing significant alignments: (Bits) Value seq18 502 8e-138 seq1 488 2e-133 seq8 461 3e-125 seq9 295 2e-75 seq14 105 2e-18 >seq18 Length=36757632 Score = 502 bits (556), Expect = 8e-138 Identities = 644/889 (72%), Gaps = 64/889 (7%) Strand=Plus/Plus Query 32568 CTGGTTGGCGTCGAGAATCGACAGCCGGATACGGCGGATGAAGTACGGCGAGAAGATCGG 32627 ||||| | ||| || | ||| | |||||| || |||||||||||| | ||||||||||| Sbjct 22717053 CTGGTCGTTGTCCAGCACCGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGG 22717112 Query 32628 GTGAATCCCCTCGGACACACCAGGCATCTTGGCGATGGTCCCGGTAGGTGCGATGGTTCT 32687 ||| || ||||| || ||||||||||| ||||||||||| || || || | || | Sbjct 22717113 GTGGATACCCTCACTGACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCG 22717172 Query 32688 CTTCTTGACAGGTACCGGGATTCGCAGTTTGTGCGCGTACAGCTGCGCCTCCATGTCAAC 32747 ||||||||| || |||||||| |||| | || | || || ||| | |||| || Sbjct 22717173 CTTCTTGACCGGCACCGGGATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGAC 22717232 Query 32748 CTGCTTCGCCCAGC-CCCGCAGAACATCACGGAACCAGGTGTCCGTAGGCGCATCGGAGT 32806 || | || ||| | |||||| | | | ||||| |||| || || | || | Sbjct 22717233 CT-CAGCGGCCATCTCCCGCAAGAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAAT 22717291 Query 32807 ACCGCTTGCCGATGAGAGCCAGGAACGAAGCCACGCCCAGGTGCCCGACGCCGATACGTC 32866 ||| ||| | || |||| | || ||||| || |||||||| || ||||| || | Sbjct 22717292 ACCTACGGCCTGTCAGGGCCAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCC 22717351 Query 32867 GGTTGCGGTCCAGAACCTCCCGAGACTTCGGGTCAGCCACCGGAGAGAACGTGGCCCGGA 32926 ||||||| ||||||||||| || |||||| ||||| |||| |||||||| ||||||| Sbjct 22717352 GGTTGCGATCCAGAACCTCTCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGA 22717411 Query 32927 TGAGGAACCTCGTCATCAGCTGGTGAGCCTTGATGAGCCCCAGGTGGTCGACCTTGTTCC 32986 | ||||||| ||||||||| |||| || ||| || | | || |||| ||| || Sbjct 22717412 TCAGGAACCGCGTCATCAGACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTC--CC 22717469 Query 32987 GGTCGTCGCGGACGAACGCCGCGAGGTTGATGTGGCCAAGGTTGCAGGGCTCCCAGGGCT 33046 || ||||| |||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct 22717470 GG-CGTCGGTGACGAACGCCGCGAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCT 22717528 Query 33047 CCAGCGTGATCTCCCCGCAGGGGTTCGTACAGACGACCCGATTGGGCTCCCCCTGGTTGG 33106 ||||||||||||||||||| ||||| || ||||||||| |||||||| || ||||| Sbjct 22717529 CCAGCGTGATCTCCCCGCACGGGTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGG 22717588 Query 33107 ACAGTGAGGAGTCCCACATTCCCGGTTCTCCGTTGCGTACAGCCCCCTCGGAGAGGGCCT 33166 |||| | ||||||||| ||||| || ||||||||||| || ||||||||||| |||| Sbjct 22717589 ACAGGCTGCTGTCCCACATCCCCGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCT 22717648 Query 33167 TCAGAATCCGCTCGGCCCAGTTC------CCCGCGATGCTGGGATCTTC---AGCCT--- 33214 |||| | ||| | ||| ||| | || | || || || | ||||| Sbjct 22717649 TCAGCACCCGGTGTGCC---TTCGTGGAGCGCGGGTTGAGCGGGTCGACAGGAGCCTTGG 22717705 Query 33215 -CA--CTCCAGAACTCGTTATCGACCTCGACGGAGATGTTCGTGGTCCAGTGAGAGCCCG 33271 || ||||||||| | | || |||||||| ||||||||||||||||||||||| || Sbjct 22717706 CCAGGCTCCAGAACGCATCGTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGC 22717765 Query 33272 AGTCCTCCTTGATGTTGATGAA---CTCGA---AGAT----------------------- 33302 ||||| |||||||||| |||| ||| | |||| Sbjct 22717766 TGTCCTGCTTGATGTTGGTGAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGT 22717825 Query 33303 ------------CTGCGGGTCAGCCCAGTGCATCATCGCCATACGAGCTGACCGGCGAAC 33350 |||| ||| |||||||||||||||||||| ||||| ||||||||||| Sbjct 22717826 GAACGTCTCGCCCTGCCAGTCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGCGAAC 22717885 Query 33351 TCCACCGGCCACCACGCACTGCGCGATCGCATGGTCAATCTCCATTGCA 33399 || ||||||||||| ||||||||||| || ||||| |||||||| ||| Sbjct 22717886 ACCTCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCA 22717934 Score = 295 bits (326), Expect = 2e-75 Identities = 484/684 (71%), Gaps = 33/684 (5%) Strand=Plus/Plus Query 44449 GTGGAACTTCTCAGTCACAGCTTCTCGGGTCCACTCCGAGAGGTCGTACGGTTTGGTCGG 44508 |||||||| ||| || | ||||| || ||||||| || |||||||| || |||||||| Sbjct 22718112 GTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGG 22718171 Query 44509 CTTGCCCTTCC-CGCCCTTCTTCCCGGCCATCCAGTACCGGCCGGTCTGCGGTCGCTCAA 44567 ||| | | || |||||||||||| |||| |||| |||||||| ||| ||| | Sbjct 22718172 CTT-CGGTGCCTTGCCCTTCTTCCCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGA 22718230 Query 44568 CGCCGTACATCATCTCTACGGCAACCGAGTAAACCCCCAGCTGGAAGTCATCGCCTGGTG 44627 | ||||| ||||| | || || | || ||| || || ||||||||||| || || ||| Sbjct 22718231 CACCGTAGGTCATCGCGACCGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTT 22718290 Query 44628 TGTTCCCTGTCTTGTAGTCCTCCACCACAAGTTCACCGTCGATCACCTTGATCGCGTCGA 44687 |||||| |||||||||||| || ||| || ||||||| ||| || ||||||| Sbjct 22718291 GGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGA 22718350 Query 44688 TGAACCCCCTGA-CAGGAACGCCATCCAAGTCGATGTCGAACCCCAACTCTATGCCGGGT 44746 || | || | | ||||| | || || | ||||| ||||| || ||| || | || Sbjct 22718351 TGTATCCGCGAACCAGGATC-CCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGC 22718409 Query 44747 GTTCCGTCTGGAGCCTTCCAGAACTCCTCCTCCGGGTGCTCGTTGTGCCAGTCGAACCAT 44806 || ||||| || | | ||||| ||||| |||| ||| |||| |||| | Sbjct 22718410 GTACCGTCCGGGGTCACCCAGATCTCCTGGCCCGGAGTCTC---CCGCCACGCGAAGAAC 22718466 Query 44807 CGCTCCACCTGCTCCAGCCCGAGTGCATACCTGCGCTCGATGTC-CGCTCGGCCGGCATA 44865 ||| ||||||||||| |||| | |||| |||||||||||| |||| | ||| || Sbjct 22718467 TTCTCGACCTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCT-GACCGTTGTA 22718525 Query 44866 CGGTCCAGACCGGCTCCAGAACTGGACGTTGGGCGTCTCGCTGGTCAACGCGCCGATGTC 44925 ||| ||||||| |||| ||| || ||| || ||||| ||| || || || | ||| Sbjct 22718526 CGGACCAGACCACGTCCACCACTCGAAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTC 22718585 Query 44926 TTTGTCGTACT--CGGCGGAAAAGATCTCCTGGGCCTTCTCCAGGCTCATTTCGAGAT-C 44982 ||| |||| | | ||| || || |||| ||||| || || ||| || || | Sbjct 22718586 GTTGGCGTAGTGCCAACGG--AACATGTCCTTGGCCTCGTCAAGCGTCA--GCGGCATGC 22718641 Query 44983 CTTGG----CCGCTAACTCCACGGTC---------GTGTGGAACGCCGTTCCCTGGGGCA 45029 | | | || || ||| || | | | ||||||||| || ||||| |||| Sbjct 22718642 CGTAGGACTCCCATACCTCGACCGCCTCAGCGACAGCGTGGAACGCAGTCCCCTGCGGCA 22718701 Query 45030 GCCAGGCCGCAGGCCGCTGCCATACCTTGTCAATCCGTGAGAGCTTGTACGCCATAGGGC 45089 |||||||||| ||||||||||| |||||||| ||||| | ||||||||||||||| |||| Sbjct 22718702 GCCAGGCCGCTGGCCGCTGCCACACCTTGTCGATCCGAGCGAGCTTGTACGCCATCGGGC 22718761 Query 45090 A--TCGTTCGTACTGGTTTAGCTG 45111 | |||| ||||||||| | ||| Sbjct 22718762 ACTTCGT--GTACTGGTTGATCTG 22718783 Score = 86.0 bits (94), Expect = 2e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 45449 GGTGGCAAGCGCCAGATCATCCTTCCCTCCTCGGTCAAGTTGGTGTGATCATTGACACGA 45508 |||||| ||| |||||||||| |||||| ||||||||||||||||| || ||||| || Sbjct 22719316 GGTGGCCAGCACCAGATCATCTCTCCCTCGTCGGTCAAGTTGGTGTGCTCGTTGACCCGG 22719375 Query 45509 ATGATGAGGTCTTCGTCCTC 45528 || | ||||| |||||||| Sbjct 22719376 ATCAACAGGTCGTCGTCCTC 22719395 >seq1 Length=46747018 Score = 488 bits (540), Expect = 2e-133 Identities = 849/1214 (70%), Gaps = 58/1214 (5%) Strand=Plus/Minus Query 1101 GCGATGAAGCTCACCGCCCTCAACCAGCTGCTTTCCAACCTGCTGCTGACCGAAGGTGAC 1160 ||||||||||| ||||| |||||||| |||| ||| ||||||||||||||||| ||| Sbjct 34904687 GCGATGAAGCTGACCGCGATCAACCAGATGCTCTCCGCACTGCTGCTGACCGAAGGCGAC 34904628 Query 1161 CGCCGCCGCGTCCGTATCGAGATCGAGCGCAAAGAGGGCAAGCCCGAA-GGCGTC---GT 1216 || || || ||||| | ||||||||||| | | | | ||||| |||| || Sbjct 34904627 CGGCGACGGGTCCGCCTGGAGATCGAGCGAGCACCCGCCGA-CCCGACCGGCGGGAAGGT 34904569 Query 1217 CATCGACGCGCAAGCCCAGTTCAAGCAGTGGCTTGA-------AGCCCCG-----TAATC 1264 | | |||| | | | | |||||||| | || | ||| || | || Sbjct 34904568 CGTTGACGTGACCGACGTGCTCAAGCAGCGCCTCGCCAAGGCGAGCGGCGGGGGGTGATG 34904509 Query 1265 CCGGCCCGGAGGCCGGTTTCCAGAGAAGTGCCCGCTACCGCACTGCTCCCCCTCCGGGT- 1323 | ||| ||| || ||| ||| || ||||||||| ||||||||||| ||||| Sbjct 34904508 --GTCCCCCTGGCGGGGTTCT-GAGCGGTTGCCGCTACCG-ACTGCTCCCCCGCCGGGGG 34904453 Query 1324 -----CATC--AACGTGAAAGGA-----ATAGATGAGCACCGTAATTGGTATCGAACTCG 1371 | || ||| |||||||| || | || | | | || || |||| || | Sbjct 34904452 TTGACCCTCCGAACTTGAAAGGATCCGCATGGCCGACCTCGGCAACCCGT-TCGACCTGG 34904394 Query 1372 AACCAGATCAGCTCGTCCTGACTCGCGGTCGCGATTTCAAATGGTCATTCGAGAATTTGG 1431 | ||| |||| |||| ||| ||||| ||| ||||| || | | | Sbjct 34904393 A----GAT--GCTCTGCCTGGTCACCGGCCGCGACTTCCGCTGGTCGATCCCCCACCTCG 34904340 Query 1432 ACGAG--CAT-AATCAGCCCGTCGATTATCCGGCCGGTGATTTGTATTTCGAGATTCAGA 1488 || | || || |||||| | | || || || || ||| |||| | ||| Sbjct 34904339 ACCCGGTCACCAAGCAGCCCACCCCCTGGCCTGCGGGCGACCTGTTCCTCGAACTGGAGA 34904280 Query 1489 CCGGAGGCCAGCACAATGCGAAACAGCGCGTGTCAATTTCCGGCGCTACCGGGGGCACTT 1548 | || ||| ||||||| ||| || | |||| || |||| || || || ||||| | Sbjct 34904279 CGGGCGGCGAGCACAACGCGCTGCACCAGGTGTACATCACCGGGGCCACGGGTGGCACGT 34904220 Query 1549 ATCGCCTAGGAAATGGCACGGCATGGACTCCC--GCGATTGACTACAACGACGTGTCCGA 1606 | ||| ||| |||||| ||| ||| || || |||||||||||||||||||| Sbjct 34904219 ACACCCT--GAACCTCAACGGCACCGACACCCCGGCCATCGACTACAACGACGTGTCCGA 34904162 Query 1607 GAACCCACAGGGGCTCTCCGGCGACATCACCGACGCGATGGAGACGCTCTTCGGCGCAGG 1666 |||||| ||||| || |||| |||||| ||||| || || || |||| || || Sbjct 34904161 GAACCCGCAGGGTCTGGCCGGTGACATCCAGGACGCCATCGACGCGGCGCTCGGGGCCGG 34904102 Query 1667 CAACGTCAAGGTCCACCCCACGACCCTCTACCCGTCCTGGACTCTGAACTTCAACCTGAA 1726 |||| | ||| || || | || | ||| | ||||| ||||||||||||||||| Sbjct 34904101 TAACGGCCTGGTGCATCCGGTCTCGCTGTTCCCCGCGTGGACGCTGAACTTCAACCTGAA 34904042 Query 1727 CAGCGGCAAGCCGCTCACCGAGCAGCTGGTCAACACGATCAACAAGGCAGCGAACGACTT 1786 | | ||||||| || ||||||||| |||||||||||||||||||||| |||||||||| Sbjct 34904041 CGCCAGCAAGCCTCTGACCGAGCAGTTGGTCAACACGATCAACAAGGCCACGAACGACTT 34903982 Query 1787 TTTCAATACGTTCGATGCGCTGCTCGGGGTGAACGTCGAGATGACTGTCACCGACGCTCT 1846 ||| || ||||||| ||| |||||||| |||| |||||||| ||||||||| | || Sbjct 34903981 CTTCGATGCGTTCGACCAGCTCCTCGGGGTCGACGTGGAGATGACGGTCACCGACACCCT 34903922 Query 1847 CAACTTCAAGCTCCAGGTGACCTCCATCAAGTCGTTTGACGAGGTCGGCGTGGTGACCTT 1906 |||||| ||||| |||||||||| ||||| || ||||||||||| || ||||| Sbjct 34903921 GAACTTCCAGCTCAAGGTGACCTCGCGGCGCTCGTTCGATGAGGTCGGCGTCGTCACCTT 34903862 Query 1907 CGTGGTCGATGTGACCTCCACTGCGGTCAAGAACTTCTTCAACGGGTTCGCCGGCCTTAT 1966 || |||||| |||||||| || ||||||||||||||||||||||| ||| |||| || || Sbjct 34903861 CGCGGTCGACGTGACCTCGACGGCGGTCAAGAACTTCTTCAACGGCTTCTCCGGGCTGAT 34903802 Query 1967 CGGCGCGGTCAACACCGTGAACGTCGACTTCTACTGGAATCGGACCTACGCGGTCGAGTT 2026 ||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct 34903801 CGGCGCGGTGAACACCGTCAACGTCGACTTCTACTGGAACCGGACCTACGACATCGAGTT 34903742 Query 2027 CCTCGGCAGCCTGGCAGAGACCCCGGTGCCGTTGCTCCTCACCG-ACGCGGCGAGCCTGA 2085 | ||||| ||||| ||||| ||||| || |||| | || ||||||| | || | Sbjct 34903741 CGTCGGCGAGCTGGCCGAGACGCCGGTACC-CGCCTCCACGGCGAACGCGGCCGGTCTCA 34903683 Query 2086 CCGGCGCGAGCAAGAAGCTGACCACCG---AGATTCTGAAGCCAGGCAAGGCCCGGTTGA 2142 | ||| | | |||| | ||||| | | | |||||||||||| ||| ||| Sbjct 34903682 CGGGC---ACCTCGAAGGCCATCACCGTCTCGGTGGTCGAGCCAGGCAAGGACCGCCTGA 34903626 Query 2143 CTATGTGGCACTTCGACATCGACGGTTCGATGGCCGAACTCAAGGTGGAAAGCGAAGAGG 2202 | | |||| ||| |||||||| || ||| ||||||| || |||||||| Sbjct 34903625 CCGTCTGGCCGTTCACGATCGACGGCGTGACCGCCTCGATCAAGGTCGAGTCCGAAGAGG 34903566 Query 2203 CCGACAAGGTCTCGGCACGTACCCGCTGGCAACTGGTCTTTCTCGAAGA-CGGCGAGCCC 2261 |||||||| || || || ||||||||| |||| ||| | || |||||| | Sbjct 34903565 CCGACAAGATCCCGAACCGCTGCCGCTGGCAGTTGGTTCATCT-GCCGACCGGCGAAGCG 34903507 Query 2262 GCAGGCGGCGACCC 2275 || ||||| ||||| Sbjct 34903506 GCCGGCGGTGACCC 34903493 Score = 82.4 bits (90), Expect = 3e-11 Identities = 90/117 (77%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 4012 CCAAGCAGGCGGTCCCCTATTTCAGAGGGGAGCCCCTGCGCCTGGGTCA-GTAGCTCAAT 4070 |||||| |||||| ||| | | | |||||||||| || || | || |||||||||| Sbjct 34903374 CCAAGCGGGCGGTTCCCCAGAGC-GTGGGGAGCCCCCGCACCAAGTACACGTAGCTCAAT 34903316 Query 4071 TGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTCCCTCCTGGCCTG 4127 ||||||||||| ||| ||||||||||| ||| ||||||| |||||||| || Sbjct 34903315 TGGTAGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCGA----CTCCTGGCGTG 34903263 >seq8 Length=24646021 Score = 461 bits (510), Expect = 3e-125 Identities = 631/874 (72%), Gaps = 42/874 (5%) Strand=Plus/Minus Query 10425 CCTGAAGCCGGAGCAGGCCCAGGACTACTTCGCCGAGATCGAGAAGACCTCGATCGTCCA 10484 |||| |||| |||||||| |||| |||||||||||| ||||||||||||||||||||| Sbjct 19507246 CCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACCTCGATCGTCCA 19507187 Query 10485 GAAGATCGCACGCAAGGTTCCGATGGGACCGACCGGCATCTCGATTCCGTTCTGGAACGG 10544 | || |||| | ||||| |||||||| | || ||| ||| ||| |||| ||| Sbjct 19507186 GCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCGCACTGGGTCGG 19507127 Query 10545 CGCGGTGTCGGCTGGCTGGGTCGGTGAGGGCGAGCAGAAGCCGCTGACCAAGGGC----- 10599 || ||| || ||| |||||||||| || |||||| | ||||||||| Sbjct 19507126 CGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACCAAGGGCAACAT 19507067 Query 10600 GGGTTCGACCAGAAGGAACTCCACCCGTGGAAGATCGCGGTCATCTTCGCCGAGACCGCT 10659 | |||| |||| | | | ||| ||||||||| ||||||| | | | || Sbjct 19507066 GACTTCG--CAGACC-ATCGCGCCCCAC--AAGATCGCGACGATCTTCGTGGCGTCTGCG 19507012 Query 10660 GAAGTCGTGCGTCTCAACCCGCTCAACTACCTG--AACGTCATGCGGACCAAGATCGCGG 10717 || ||| ||| |||||| |||||||||| ||| |||||| |||||| | ||| Sbjct 19507011 GAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAAC--CATGCGTACCAAGGTGGCGA 19506954 Query 10718 AAGCGATCGCGCTGAAGTTCGACGCCGCCGCGCTGTACGGCATCGACAAGCCCGCCGTGT 10777 || ||||| || |||||||| ||| ||| || |||||| ||||| ||||| | Sbjct 19506953 CCGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGACA-GCCCG-----T 19506900 Query 10778 TCCAGGGCTACCTCGCGGAGACGACCAAGAAGGTCTCCATCGCCGGTACC---GGCACCC 10834 ||| | |||| ||| |||| |||||| |||| || || | ||| || || Sbjct 19506899 TCCCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACCACCGGTGCCA 19506840 Query 10835 AGAACGCCTACAACGCCATCGGCGTGGACGCACTGGCCCAGCTGGTCAACGACGGCAAGA 10894 || || ||| || | | |||| ||| ||| || |||||| ||||||||||||| Sbjct 19506839 CGACCGTGTACGACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGTGAACGACGGCAAGA 19506780 Query 10895 AGTGGACCGGCACGCTGCTGGACAACGTCACTGAGCCGCTCCTGAACGGCGCTGTGGACG 10954 |||||||| ||| || |||||| || |||| |||||| ||||||||||||| |||| Sbjct 19506779 AGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAACGGCGCGAAGGACC 19506720 Query 10955 CCAACGGCCGTCCGCTGTTCGTGGAGTCGACCTACG--AGGGCCTGGTTACCCCCATGCG 11012 ||||| || ||||||||| | ||||||||||||| |||| | | ||| | || Sbjct 19506719 AGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAGGCC--GCGAGCCCGTTCCG 19506662 Query 11013 CGAGGGCCGCATCCTCGGCCGGCCTACCGTCCTGAACGACCACGTCGTGAGCGACGGCGT 11072 |||||| ||| ||| ||| || ||| |||| | ||||||||||||| || || Sbjct 19506661 TTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGTG---GAGGG--- 19506608 Query 11073 CCCCGGAGCCCGCACGCTCGGCTTCATGGGTGACTTCAACCAGGTCATCTGGGGTCAGAT 11132 | |||| |||||||||||||||||||| |||| |||||||||| ||||| Sbjct 19506607 ---------CACCACGGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGCCAGAT 19506557 Query 11133 CGGCGGCCTGTCCTTCGACGTTACCGACCAGGCGACCCTGAACTTCGGCACCGAAGCGGC 11192 |||||| |||||||||||||| || || ||||||||||||||| | ||||||| | | Sbjct 19506556 CGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTCGAGAG 19506497 Query 11193 TCCCAAGTTCGTCTCGCTGTGGCAGCACAACATGGTCGCGGTCCGAGTCGAGGCCGAGTT 11252 || || |||||||||||||||||||||||| | ||||| ||||| |||||||| |||| Sbjct 19506496 CCCGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGCTGAGTA 19506437 Query 11253 CGCGTTCATGATCAACGACAAGGACGCCTTCGTC 11286 ||||||| ||||||| || || |||||| Sbjct 19506436 CGCGTTCCACTGCAACGACGCCGAGGCGTTCGTC 19506403 Score = 122 bits (134), Expect = 3e-23 Identities = 161/220 (73%), Gaps = 9/220 (4%) Strand=Plus/Minus Query 11556 GGCCGACGTGGTCGACATCGAGGCAGAAGCGGTGCTTCGCCTGGTGAGGAACCACGAGGG 11615 |||||| || ||||||||||||| || |||||||| || |||||| | |||| ||||| Sbjct 19505980 GGCCGATCTGATCGACATCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAACCCGGAGGG 19505921 Query 11616 CTACCTGTCCGAAACGGACGGCAACTACACGTACATGCTCCAGGC--CACGGACCCGAAC 11673 |||||| || || || ||||| ||||| ||| ||||||||| | | | | | Sbjct 19505920 CTACCTCTCGGAGACCGACGGGGCGTACACCTACCAGCTCCAGGCTGATCTGTCTC--AG 19505863 Query 11674 CGGAAGCTGGAGATCCTCACCGAAGAGTGGGAGATGTTGGGAGTCCGCAGGACT----CG 11729 | ||||| | ||||| |||||||||| || ||||||||| | |||| || Sbjct 19505862 GGCAAGCTCGTCATCCTTGGCGAAGAGTGGACGACCTTGGGAGTCAAC-CGACTCTCGCG 19505804 Query 11730 GATGTCGATCCTCGTCCCGAACATGGTGAAGCCGTCATGA 11769 ||||| | | ||||||||||||| |||| |||| ||||| Sbjct 19505803 CATGTCCACCATCGTCCCGAACATCGTGATGCCGACATGA 19505764 Score = 116 bits (128), Expect = 1e-21 Identities = 320/483 (66%), Gaps = 43/483 (9%) Strand=Plus/Minus Query 9533 CACATGGCGCAGTGGCACACCGGATGCGACTGCAAGGTAGTACCGGTCTTCAA-GTACGG 9591 ||||| | | |||||||| | || ||||||||| ||| || || |||||| | || || Sbjct 19508182 CACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGTCTTCGACGT--GG 19508125 Query 9592 CGAG-TGGCACGGACAAGCAGCCGCTGACCGAGCACTGGACCTGTGGAACGACGCCAGCC 9650 || |||| |||| | || || || || || ||| | || |||| |||||| | Sbjct 19508124 AGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGATCGACGCTGGGA 19508065 Query 9651 GAGAGGCGACCCGGCTCATCGAGTCAGGCAAGGCCCGCTCTTCCAATCACAACCGGGAGG 9710 ||| || | || |||||| | || |||||||||||||| || | ||| |||| Sbjct 19508064 AAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGAGAACAAGGAGA 19508005 Query 9711 CGATCAACGCCCTCCGACGCCGCCTAGAGCGCGGCGAGATCAACCCACG--CGAGTTCGC 9768 |||||||||| ||||| |||||| | | ||||||||| || | | | ||| | | Sbjct 19508004 CGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCGAGTTC--GCAATGTCCGACTAC-- 19507949 Query 9769 TGCACTCGCAGCGTAATTCATCCATCGCGACGGCCTGGAGCCGTCTTTCACTATGCCCAG 9828 |||||||| ||||||| | | ||| || || | || | || |||||||| Sbjct 19507948 -GCACTCGCTGCGTAATCC------CCCGAACCCCAGGTGGGTTCATCAACCATGCCCAG 19507896 Query 9829 GAGGC--AATGAATTGTCTGA------AACGCC---AGCCACCCC------CGACGCTGC 9871 ||||| || | |||| || ||| | || ||| || |||| | | Sbjct 19507895 GAGGCGAAAACACATGTCCGACACCGTAACTACCGAAGGCACTCCGGCCGGCGACCCGAC 19507836 Query 9872 CCCCGCTGAGACT--CCGGCCGCAG-------AGCCGAAGACCTTCACCGAGGACTACGT 9922 ||| | | ||| | ||||| | |||||||||| | ||||| ||||| Sbjct 19507835 CCCGGTGGTCACTGACAAGCCGCTGGAACCGACTCCGAAGACCTACGACGAGGCATACGT 19507776 Query 9923 CAAGTCGCTGCGCGACGAAGCCGCAGCTGCTCGCGTCGGCAAGAAGGAAGCGGTCGACAC 9982 |||| ||| ||| | || ||||| |||||||| || | ||||||||| || ||||| | Sbjct 19507775 CAAGGAGCTTCGCCAGGAGGCCGCTGCTGCTCGGGTTGCCAAGAAGGACGCAGTCGAAGC 19507716 Query 9983 CGC 9985 ||| Sbjct 19507715 CGC 19507713 >seq9 Length=46179939 Score = 295 bits (326), Expect = 2e-75 Identities = 484/684 (71%), Gaps = 33/684 (5%) Strand=Plus/Minus Query 44449 GTGGAACTTCTCAGTCACAGCTTCTCGGGTCCACTCCGAGAGGTCGTACGGTTTGGTCGG 44508 |||||||| ||| || | ||||| || ||||||| || |||||||| || |||||||| Sbjct 16532232 GTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGTCAGGTCGTAGGGCTTGGTCGG 16532173 Query 44509 CTTGCCCTTCCC-GCCCTTCTTCCCGGCCATCCAGTACCGGCCGGTCTGCGGTCGCTCAA 44567 ||| | | || |||||||||||| |||| |||| |||||||| ||| ||| | Sbjct 16532172 CTT-CGGTGCCTTGCCCTTCTTCCCCACCATGAAGTAGTCGCCGGTCTTCGGAGCCTCGA 16532114 Query 44568 CGCCGTACATCATCTCTACGGCAACCGAGTAAACCCCCAGCTGGAAGTCATCGCCTGGTG 44627 | ||||| ||||| | || || | || ||| || || ||||||||||| || || ||| Sbjct 16532113 CACCGTAGGTCATCGCGACCGCGAGCGCGTACACGCCGAGCTGGAAGTCGTCACCCGGTT 16532054 Query 44628 TGTTCCCTGTCTTGTAGTCCTCCACCACAAGTTCACCGTCGATCACCTTGATCGCGTCGA 44687 |||||| |||||||||||| || ||| || ||||||| ||| || ||||||| Sbjct 16532053 GGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCCCCGTCGACCACGACGACGGCGTCGA 16531994 Query 44688 TGAACCCCCTGA-CAGGAACGCCATCCAAGTCGATGTCGAACCCCAACTCTATGCCGGGT 44746 || | || | | ||||| | || || | ||||| ||||| || ||| || | || Sbjct 16531993 TGTATCCGCGAACCAGGATC-CCGTCGAGCTCGATCTCGAAGTACAGCTCGATCGCTGGC 16531935 Query 44747 GTTCCGTCTGGAGCCTTCCAGAACTCCTCCTCCGGGTGCTCGTTGTGCCAGTCGAACCAT 44806 || ||||| || | | ||||| ||||| |||| ||| |||| |||| | Sbjct 16531934 GTACCGTCCGGGGTCACCCAGATCTCCTGGCCCGGAGTCTC---CCGCCACGCGAAGAAC 16531878 Query 44807 CGCTCCACCTGCTCCAGCCCGAGTGCATACCTGCGCTCGATGTC-CGCTCGGCCGGCATA 44865 ||| ||||||||||| |||| | |||| |||||||||||| |||| | ||| || Sbjct 16531877 TTCTCGACCTGCTCCAGGCCGACGGTGTACCGGCGCTCGATGTCTCGCT-GACCGTTGTA 16531819 Query 44866 CGGTCCAGACCGGCTCCAGAACTGGACGTTGGGCGTCTCGCTGGTCAACGCGCCGATGTC 44925 ||| ||||||| |||| ||| || ||| || ||||| ||| || || || | ||| Sbjct 16531818 CGGACCAGACCACGTCCACCACTCGAAGTTCGGGGTCTCCTCGGTGAAGGCTCCAACGTC 16531759 Query 44926 TTTGTCGTACT--CGGCGGAAAAGATCTCCTGGGCCTTCTCCAGGCTCATTTCGAGAT-C 44982 ||| |||| | | ||| || || |||| ||||| || || ||| || || | Sbjct 16531758 GTTGGCGTAGTGCCAACGG--AACATGTCCTTGGCCTCGTCAAGCGTCA--GCGGCATGC 16531703 Query 44983 CTTGG----CCGCTAACTCCACGGTC---------GTGTGGAACGCCGTTCCCTGGGGCA 45029 | | | || || ||| || | | | ||||||||| || ||||| |||| Sbjct 16531702 CGTAGGACTCCCATACCTCGACCGCCTCAGCGACAGCGTGGAACGCAGTCCCCTGCGGCA 16531643 Query 45030 GCCAGGCCGCAGGCCGCTGCCATACCTTGTCAATCCGTGAGAGCTTGTACGCCATAGGGC 45089 |||||||||| ||||||||||| |||||||| ||||| | ||||||||||||||| |||| Sbjct 16531642 GCCAGGCCGCTGGCCGCTGCCACACCTTGTCGATCCGAGCGAGCTTGTACGCCATCGGGC 16531583 Query 45090 A--TCGTTCGTACTGGTTTAGCTG 45111 | |||| ||||||||| | ||| Sbjct 16531582 ACTTCGT--GTACTGGTTGATCTG 16531561 Score = 86.0 bits (94), Expect = 2e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 45449 GGTGGCAAGCGCCAGATCATCCTTCCCTCCTCGGTCAAGTTGGTGTGATCATTGACACGA 45508 |||||| ||| |||||||||| |||||| ||||||||||||||||| || ||||| || Sbjct 16531028 GGTGGCCAGCACCAGATCATCTCTCCCTCGTCGGTCAAGTTGGTGTGCTCGTTGACCCGG 16530969 Query 45509 ATGATGAGGTCTTCGTCCTC 45528 || | ||||| |||||||| Sbjct 16530968 ATCAACAGGTCGTCGTCCTC 16530949 >seq14 Length=60807478 Score = 105 bits (116), Expect = 2e-18 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 18308 CCATTCCCTCCGGGTATCGAGATCCCCTGGGAGCGAGCCCCGTTCACGCAGTACGTCATC 18367 || ||||| ||||| |||||||||| |||||| || ||||||||||||| ||||||| Sbjct 27571939 CCGTTCCCGCCGGGAGTCGAGATCCCGTGGGAGACCGCTCCGTTCACGCAGTTCGTCATC 27571880 Query 18368 CCAGACTACTCGTACGAGGATGAGAAGCTGGCCAACCG 18405 || |||||||||| |||||| ||| || | |||||||| Sbjct 27571879 CCGGACTACTCGTTCGAGGACGAGGAGGTCGCCAACCG 27571842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167530062514048