Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_028912.1 Length=49717 Score E Sequences producing significant alignments: (Bits) Value seq1 641 1e-179 seq18 565 8e-157 seq8 387 4e-103 >seq1 Length=46747018 Score = 641 bits (710), Expect = 1e-179 Identities = 1024/1440 (71%), Gaps = 71/1440 (5%) Strand=Plus/Minus Query 704 TGCCACGGGAAAAAGTCATCCGCTGAGGGGAACGCCCGAAAGCGGGAATTGCGAGCCAGG 763 |||||||| || |||||| |||||||||| |||||| ||||||| | ||| || Sbjct 34905112 TGCCACGGCAAGAAGTCAGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGG 34905053 Query 764 AGGAAGCGCCCACAGGACAGACATCCCGGCTCTTTGT--AGCGG-CCAGGTGCC-GCTAG 819 |||||||| ||| | | | || || || | | || ||||| ||||||||| ||| Sbjct 34905052 AGGAAGCGACCAGAACAACGCCACCCTGGG-CGTCGTTAAGCGGGCCAGGTGCCTGCTCC 34904994 Query 820 ATACCCAGGAGGTAACCACAGTGGGAGCTGCAACACGCGGCCCGGTCCCTGAGAG-GACA 878 | |||||||||| || ||||| ||||||||||| || | | ||| Sbjct 34904993 A--CCCAGGAGGTGACT---GTGGGC------ACACGCGGCCCCATCGGAAAACGCGAC- 34904946 Query 879 GACCAGACCGTTCGCCACAGC------GAG---CCGGTCGACAAGATCGAGGTCTTCGGC 929 || | |||||| | || | ||| ||| ||| | |||| | | |||| Sbjct 34904945 GAAGAACGCGTTCGTCGCAACACCCCGGAGAACCCGACCGAAACGATCTCGATGATCGGG 34904886 Query 930 GAAGTGAGAG-TGCCTGACCTCGGAGACGTGAGTTTCCGTGGTGAGACACACCCGATCAT 988 ||| ||| | || || ||||| ||| |||| | | || ||||| || ||| |||| Sbjct 34904885 ACGGTG-GAGATCCCGGAACTCGGCGACATGAGCTACATGGGCGAGACCCATCCGCTCAT 34904827 Query 989 CAAGGACCTGTACCAGGCGATGCAGGAATCCGGCCAGAGCCG----GTTCTACGAGCCGT 1044 | | || ||||| | ||||| || |||| ||| ||||| ||||||||| ||| Sbjct 34904826 CGAAGAGATGTACGACGCGATCAAGCAATC-GGC---AGCCGTGAAGTTCTACGAACCGA 34904771 Query 1045 CTGACTGGCAGGTCGCACGCCTCACACTCCTCGCGCTGAACGAGGAGCTCGTCGCAGCCA 1104 | ||||||||| |||| |||||| | ||| | | |||||| | || ||| |||| |||| Sbjct 34904770 CCGACTGGCAGTTCGCTCGCCTCGCTCTCTACACACTGAACCAAGAACTCATCGCGGCCA 34904711 Query 1105 GGCACGGAGACAAGCCGATTGGCGCGATGAAGCTCACGGCGCTGAACCAGATGCTCACGA 1164 |||| | |||||| || || ||||||||||| || ||| | |||||||||||| | Sbjct 34904710 AGCACCAGGGCAAGCCCATCGGTGCGATGAAGCTGACCGCGATCAACCAGATGCTCTCCG 34904651 Query 1165 CGCTCATGCTGACCGAAGGCGACCGCCGCCGCGTCCGCATCGAGCTCGAACGGAAGC-CC 1223 | || ||||||||||||||||||| || || |||||| | ||| |||| || ||| || Sbjct 34904650 CACTGCTGCTGACCGAAGGCGACCGGCGACGGGTCCGCCTGGAGATCGAGCG--AGCACC 34904593 Query 1224 AGCCAGCCTGAAGGCGTCGTCATCGACGCTCGCGAGTCCTTCAAGAAGTGGCTGGAAGAA 1283 ||| || || || || | | || | || | || || ||| || ||| | Sbjct 34904592 CGCCGACCCGAC--CGGCGGGAAGGTCGTTGACGTGACC-----GACGTG-CTC-AAGCA 34904542 Query 1284 CCGTGATCCCCCGGTCCCCCGAGGCGGGTTAGGCGTTTCCCTC-CTCCTTTCCCGCCGAG 1342 || || || | | || |||| | | || |||| | ||| || Sbjct 34904541 GCGCCTCGCCAAGGCGAGCGGCGGGGGGTGATG-GTCCCCCTGGCGGGGTTCTGAGCGGT 34904483 Query 1343 AGCCCCGCTACCG---GCTCCCCGTCTCGGGGTTGACC----GATCT-GAAAGGAACCAC 1394 ||| ||||||| ||||||| | |||||||||| || || ||||||| || | Sbjct 34904482 TGCC--GCTACCGACTGCTCCCCCGCCGGGGGTTGACCCTCCGAACTTGAAAGGATCCGC 34904425 Query 1395 ATGGCAGTAATCGGCATCGAGCTCGAACCGGATCAGCTCGTCCT---CACCCGTCGTCGC 1451 ||||| | |||||| | | |||| | ||| |||| ||| |||| | || | Sbjct 34904424 ATGGCCGACCTCGGCAACCCGTTCGACCTGGAGATGCTCTGCCTGGTCACCGGCCG---C 34904368 Query 1452 GACTTCAAGTGGACGTTCGAGAATCTGGATGACGACGGCAACC---CCACCAACTTCCCC 1508 |||||| ||| || || | || || | | ||| | ||||| || || Sbjct 34904367 GACTTCCGCTGGTCGATCCCCCACCTCGACCCGGTCACCAAGCAGCCCACCCCCTGGCCT 34904308 Query 1509 GCTGGTGAGCTCTTCTTCGAGCTAGACACCGGAGGCCAGCACAACGCGCTCCAGCAGGTC 1568 || || || || ||| |||| || || || || ||| ||||||||||||| || ||||| Sbjct 34904307 GCGGGCGACCTGTTCCTCGAACTGGAGACGGGCGGCGAGCACAACGCGCTGCACCAGGTG 34904248 Query 1569 CAGTTGTTCGGAGCCACAGGCGGTACGTACACCCTGAACGTCAACGGGGTCGACACCCCG 1628 | | ||| ||||| || || ||||||||||||||| ||||||| |||||||||| Sbjct 34904247 TACATCACCGGGGCCACGGGTGGCACGTACACCCTGAACCTCAACGGCACCGACACCCCG 34904188 Query 1629 CCCATCGACTACAGCGACGTGTCCCAGAACCCGCAGGGTCTCGCTGGAGACCTCACCGAC 1688 |||||||||||| |||||||||| |||||||||||||||| || || ||| || ||| Sbjct 34904187 GCCATCGACTACAACGACGTGTCCGAGAACCCGCAGGGTCTGGCCGGTGACATCCAGGAC 34904128 Query 1689 GCCCTGGAGGCGGCGGTCGGAGTGGGCAACGTCAAGGTCCACCCGGTGCTGCTGATCCCG 1748 ||| | || |||||| |||| | || |||| | ||| || ||||| |||| |||| Sbjct 34904127 GCCATCGACGCGGCGCTCGGGGCCGGTAACGGCCTGGTGCATCCGGTCTCGCTGTTCCCC 34904068 Query 1749 GCCTGGACGCTCCACTTCAACCTGAACAGCGGCAAGCCGCTCACCGAGCAGCTCGTCAAC 1808 || |||||||| |||||||||||||| | ||||||| || ||||||||| | |||||| Sbjct 34904067 GCGTGGACGCTGAACTTCAACCTGAACGCCAGCAAGCCTCTGACCGAGCAGTTGGTCAAC 34904008 Query 1809 ACGATCAACAAGACCACGAACGACTTCTTCAACACGTTCGAGCAGCTCTTCGGTGTCGAC 1868 |||||||||||| ||||||||||||||||| | ||||||| |||||| |||| |||||| Sbjct 34904007 ACGATCAACAAGGCCACGAACGACTTCTTCGATGCGTTCGACCAGCTCCTCGGGGTCGAC 34903948 Query 1869 GTGCAGATGACCGTCACCGACGTGCTCAACTTCAAGCTGAAGGTGACCTCCCTCAAGTCG 1928 ||| ||||||| ||||||||| || |||||| |||| ||||||||||| | ||| Sbjct 34903947 GTGGAGATGACGGTCACCGACACCCTGAACTTCCAGCTCAAGGTGACCTCGCGGCGCTCG 34903888 Query 1929 TTCGATGAGGTCGGAGCTGTCACGTTCGCGGTCGACATCACGTCCACGATGGTGAAGAAC 1988 |||||||||||||| | ||||| |||||||||||| | || || ||| ||| |||||| Sbjct 34903887 TTCGATGAGGTCGGCGTCGTCACCTTCGCGGTCGACGTGACCTCGACGGCGGTCAAGAAC 34903828 Query 1989 TTCTTCAACTCCGTGGCTGGTCTGATCGGAGCGGTCAACACGGTCAACGTCGACTTCTAC 2048 ||||||||| | | | || |||||||| ||||| ||||| |||||||||||||||||| Sbjct 34903827 TTCTTCAACGGCTTCTCCGGGCTGATCGGCGCGGTGAACACCGTCAACGTCGACTTCTAC 34903768 Query 2049 TGGAACCGGACGTACGACGTGGAGTTCACGGGAGCGCTCGCGCTCACCCCGGT-CCCGCC 2107 ||||||||||| |||||| | |||||| || | ||| || || ||||| |||||| Sbjct 34903767 TGGAACCGGACCTACGACATCGAGTTCGTCGGCGAGCTGGCCGAGACGCCGGTACCCGCC 34903708 Score = 93.3 bits (102), Expect = 1e-14 Identities = 104/134 (78%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 4236 CCAAGCAGGCGGTCCCCTAGCTCAGAGGGGAGCCCCTGCGCTGGGT-CA-GTAGCTCAAC 4293 |||||| |||||| ||| || | | |||||||||| || | || || ||||||||| Sbjct 34903374 CCAAGCGGGCGGTTCCCCAGAGC-GTGGGGAGCCCCCGCACCAAGTACACGTAGCTCAAT 34903316 Query 4294 TGGAAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCCTCCCTGGCCTGCAC 4353 ||| ||||||| ||||||||||||||| ||| |||||||| |||| | | ||| | Sbjct 34903315 TGGTAGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTGGCGTGTATGC-C 34903257 Query 4354 ACCACCCGTCCCCG 4367 ||||||| |||||| Sbjct 34903256 ACCACCCTTCCCCG 34903243 >seq18 Length=36757632 Score = 565 bits (626), Expect = 8e-157 Identities = 674/919 (73%), Gaps = 68/919 (7%) Strand=Plus/Plus Query 33353 AGGTGAGGAACTGGTCATCGTCCAACTCCGAGAACCGAATACGCCGGTTGAAGTACCGGG 33412 |||| ||||||||||| | ||||| | |||||||||| || |||||| |||||||||||| Sbjct 22717043 AGGTCAGGAACTGGTCGTTGTCCAGCACCGAGAACCGGATGCGCCGGATGAAGTACCGGG 22717102 Query 33413 CGAAGATCGGGTGGATACCCTCAGACACACCCGGCATCTTGGCGATGGTCCCCGTAGGCG 33472 |||||||||||||||||||||| || || |||||||| ||||||||||| || || | Sbjct 22717103 AGAAGATCGGGTGGATACCCTCACTGACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGG 22717162 Query 33473 CGACCGTGCGCTTCTTCACCGGCACCGGGATACGCAACTGGTGTGCATAGTCCTCCGCAG 33532 | |||||||||||||| |||||||||||||| ||||||| || | ||||| || | Sbjct 22717163 CCACCGTGCGCTTCTTGACCGGCACCGGGATCCGCAACTCATGGCTGAACTCCTCGGCCG 22717222 Query 33533 CCTCATCGACGGTCTTGGCGAGACCCCGCAGCATGTCCTTGAAGTTCCGGTTCGTC---- 33588 | ||||| ||| | |||||| | | |||| ||| || ||| Sbjct 22717223 CTCTGTCGACCTCAGCGGCCATCTCCCGCAAGAAAGCGGTGAA---CCGCTT-GTCTCCG 22717278 Query 33589 GGAGCCTCCGAGTAGCGCTGGTTGCGGAGTGCCAGGAACGACGCCACGCCCAGGTGGCCG 33648 || |||| ||| || | || || |||| | || ||||| || ||||| || Sbjct 22717279 GGTGCCTGCGAATACCTACGGCCTGTCAGGGCCAAATAGGAGGCCACTCCGAGGTGCCCA 22717338 Query 33649 ACACCGATACGCCGGTTGCGGTCCAAGACCTCTCGCGACTTCGGATCTGCGACAGGCGAG 33708 |||||||| ||||||||||| |||| |||||||| ||||||||| ||||| | ||| Sbjct 22717339 ACACCGATGCGCCGGTTGCGATCCAGAACCTCTCGGCTCTTCGGATCAGCGACCGCTGAG 22717398 Query 33709 AACGTCGCCCGCATCAGGAACCTGGTGATCAGCCTGTGCGCCCGCACGAGGTCGATGTAG 33768 ||||||||||| |||||||||| || ||||| | ||| || || | |||||||||||| Sbjct 22717399 AACGTCGCCCGGATCAGGAACCGCGTCATCAGACGGTGGGCTCGGATCAGGTCGATGTAG 22717458 Query 33769 TCGATCCTGCCGTTGTCCTTGACGAACGCCGCCAGGTTGACGTGACCCAGGTTGCACGGC 33828 ||| || | ||| ||| ||||||||||||| ||||||| ||| || |||||||| ||| Sbjct 22717459 TCGGTCTTCCCGGCGTCGGTGACGAACGCCGCGAGGTTGATGTGCCCTAGGTTGCAGGGC 22717518 Query 33829 TCCCACGGTTCGAGCGTGATCTCACCGCAGGGGTTCGTACAGACAACCTCGTTGGGCTCA 33888 |||||||| || ||||||||||| ||||| ||||| || ||||| ||||||||||||||| Sbjct 22717519 TCCCACGGCTCCAGCGTGATCTCCCCGCACGGGTTGGTGCAGACGACCTCGTTGGGCTCA 22717578 Query 33889 CCGACGTTCGACAGCGAGGAGTCCCACATCCCCGGTTCGCCGTTGCGGACGGCTCCCTCA 33948 |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||||| Sbjct 22717579 CCGACGTTGGACAGGCTGCTGTCCCACATCCCCGGCTCGCCGTTGCGTACGGCTCCCTCG 22717638 Query 33949 GCGAGGGCGTTGAGGATGCGGT-TG--TTCG--------GGCCTGCCCAGCCC------- 33990 | ||| || || || | |||| || |||| || || | | | Sbjct 22717639 GAGAGAGCCTTCAGCACCCGGTGTGCCTTCGTGGAGCGCGGGTTGAGCGGGTCGACAGGA 22717698 Query 33991 TCCTTGGCCGCAATCCAGAACTCTTCATCGACCTCGACCGAGATGTTCGTCGTCCAGT-- 34048 |||||||| |||||||| | || || |||||||||||||||||||| ||||||| Sbjct 22717699 GCCTTGGCCAGGCTCCAGAACGCATCGTCCACCTCGACCGAGATGTTCGTGGTCCAGTGA 22717758 Query 34049 -----GCTTTCCTG--------------ACG--------------------CCGACTTGC 34069 ||| ||||| ||| || |||| Sbjct 22717759 GATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGA 22717818 Query 34070 AGTTGATGAACTCGTAGATCTGAGGATCATCCCAGCGCATCATCGACATGCGAGCCGACC 34129 |||| ||||| | | ||| || ||||| ||||||||| |||||||||||||| Sbjct 22717819 TGTTGGTGAACGTCTCGCCCTGCCAGTCCGCCCAGTGCATCATCGCCATGCGAGCCGACC 22717878 Query 34130 GGCGAACACCCCCGGCCACCACACACTGAGCGATAGCGTGGTCGATCTCCATCGCACCGA 34189 |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||| Sbjct 22717879 GGCGAACACCTCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCATCGA 22717938 Query 34190 TACCTGTCAG-GCACCCCC 34207 ||| ||||| ||||| || Sbjct 22717939 GACCGGTCAGCGCACCACC 22717957 >seq8 Length=24646021 Score = 387 bits (428), Expect = 4e-103 Identities = 616/877 (70%), Gaps = 40/877 (5%) Strand=Plus/Minus Query 10805 TTCAAGGCGTTCCTGACTCCTGAGCAGTCGAAGGACTACTTCGCGAAGGCCGAGAAGACC 10864 ||||||| | |||| || |||||| ||||||| |||||||| |||||||||||||| Sbjct 19507257 TTCAAGGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACC 19507198 Query 10865 TCGATTGTCCAGAAGCTCGCCACGAAGATCCCGATGGGTCCGACTGGCATCACCATCCCG 10924 ||||| |||||| || ||||| |||| | ||||||||| | || ||| | |||||| Sbjct 19507197 TCGATCGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCG 19507138 Query 10925 TACTGGAACGGCGCGGTGACCGCCGAGTGGGTCGGTGAGGGCGAAATGAAGCCCCTGACC 10984 ||||| ||||| |||| ||| ||||| |||||||||| || ||||||||| | ||| Sbjct 19507137 CACTGGGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACC 19507078 Query 10985 AAGGGTTCGTTCGCGAAGAAGGACCTGACCCCGGTCAAGATCGCGGTCATCTTCGCAGAG 11044 ||||| | | | || | | | || |||||||||| ||||||| | | Sbjct 19507077 AAGGGCAACATGACTTCGCAGACCATCGCGCCCCACAAGATCGCGACGATCTTCGTGGCG 19507018 Query 11045 AGTGCTGAGGTCGTGCGTCTCAACCCGCTTCAGTACCTGGAGACGATGAAGACCAAGATC 11104 ||| ||| ||| ||| |||||| | ||||||| || ||| |||||| | Sbjct 19507017 TCTGCGGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTG 19506958 Query 11105 GCGGAAGCGTTCGCGCTGAAGTTCGACGCGGCTGCCATCCACGGCATCGACAAGCCGACC 11164 ||| || |||||| || |||||||| || || || ||||||| |||| |||| Sbjct 19506957 GCGACCGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGAC-AGCC---- 19506903 Query 11165 GCGTTCAAGGGCTACCTGACCGAGACCTCGCAGTCTGTCTC----GCTGA-ACC------ 11213 ||||| | |||| | ||||| | || | |||| ||||| ||| Sbjct 19506902 -CGTTCCCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACCACCGGT 19506844 Query 11214 ----CGAGCGCGTACGACGCTGTCGGTGTCACCGGCCTGGCGACT-CTGGTCGACGGCGG 11268 ||| || ||||||| || | || | |||||| | | || ||||| ||| ||| Sbjct 19506843 GCCACGACCGTGTACGACCAGGTGGCCGTGAACGGCCT-GAGCCTGCTGGTGAACGACGG 19506785 Query 11269 CAAGAAGTGGACCGGCACTCTGCTGGACGATGTTGCCGAGCCGATCCTCAACGGCGCGAA 11328 ||||||||||||| ||| || |||||||| | ||||||||||||| ||||||||||| Sbjct 19506784 CAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAACGGCGCGAA 19506725 Query 11329 GGACCTCAACGGTCGCCCGCTGTTCGTGGAGTCCCTGTACGACAACGTCGTGAACCCGAT 11388 ||||| |||||||||||||||||| | ||||| |||| | | || || |||| | Sbjct 19506724 GGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAGGCCGCGAGCCCGTT 19506665 Query 11389 CCGCGAGGGCCGCATTCTGGGCCGGCCTACCTACATCAACGACCACGTCGTGAGCGCTGG 11448 ||| |||||| || | | ||| || ||| | ||| ||||||||||||| | || Sbjct 19506664 CCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGTG---GAGGG 19506608 Query 11449 CGCTCCCGGCTCCCGAGTCGTCGGCGTCATGGGCGACTTCAGCCAGGTCGTGTGGGGCCA 11508 | | | || |||||| ||||||| |||||| |||| || | |||||||| Sbjct 19506607 CAC-CACG-----------GTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTGGGGCCA 19506560 Query 11509 GATCGGCGGTATCAGCGTCGACGTTTCGCAGGAGACGGTGCTGAACTTCGGCACTCCCGA 11568 |||||||||| | | ||||||| || | || || |||||| | ||||| ||| Sbjct 19506559 GATCGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAACCTGGGCACCGTCGA 19506500 Query 11569 -AGCGCCCAACTTCATCTCCCTGTGGCAGCACAACATGCTCGCTGTCCGGATCGAGGCCG 11627 ||| || |||||| |||| ||||||||||||||| | |||| ||||| ||||||| | Sbjct 19506499 GAGC-CCGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCGCAGTCCGTGTCGAGGCTG 19506441 Query 11628 AGTACGCCTTCATGGTCAACGACAAGGACGCCTTCGT 11664 ||||||| ||| ||||||| || || ||||| Sbjct 19506440 AGTACGCGTTCCACTGCAACGACGCCGAGGCGTTCGT 19506404 Score = 183 bits (202), Expect = 1e-41 Identities = 439/659 (67%), Gaps = 45/659 (7%) Strand=Plus/Minus Query 9600 GAGTGGTTCGTGCAGAACATGGAGCCAGCGCGAAAGCAGATGTCCCAGATGGACTCTCGC 9659 ||||||||||| |||||||||||| || |||||| | |||| ||| ||||||| Sbjct 19508533 GAGTGGTTCGTCAGGAACATGGAGCCCGCACGAAAGGGGTTGTCGCAGGCCGACTCTCCT 19508474 Query 9660 GAGAACGCTGTCGCCAACATGGTTCTGCGGGCTGTACGGGAAGTTGAGAACGCGGGCAGA 9719 | || ||| |||| || || | | || || ||||| |||| || || | Sbjct 19508473 CAAGCTGCGGTCACCAAGCTGACCTTGGCGACAGTGCGCGAAGTGGAGATGGCAGGTCGC 19508414 Query 9720 CGACAGATCATCCACGCAGTGCAGACTGACCCAGAGCCCCAGGTTGTGAAGGGCTGGGCC 9779 |||||||||||| ||| || ||| ||||||| || ||| | |||||||||||||| Sbjct 19508413 CGACAGATCATCGGCGCTGTCAAGAACGACCCAGCTCCTCAGATCGTGAAGGGCTGGGCG 19508354 Query 9780 AGGGTGGCGACCGGGCGCGAAACATGCGCCTGGTGCCTCATGCTCGTGTCGAGAGGGCCG 9839 ||||| || |||||||||||||||||||||||||| || ||||| | || | || || Sbjct 19508353 AGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCTGATGCTGATTTCCCGTGGCCCC 19508294 Query 9840 GTCTACGAATCCGCAAGGACTTC--CGGCCTGGAGCTCGATGACGAGACCGCCGTGGA-- 9895 | ||| || || ||| | || || | ||||| |||||||| || || Sbjct 19508293 GAGTACCTTTCGGC--GGATAGCGGGGGTCTTCACCTCGACACCGAGACCGTGGTCGACC 19508236 Query 9896 -CTTGTACAGGGCTG-------------GAA-----TGGATGTCACCGAG---TACATGA 9933 || | || ||||| ||| || | ||| || |||| Sbjct 19508235 TCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTCCGCGAAGAGACCAAGCCCCACATCG 19508176 Query 9934 ATCAGTGGCACACCGGCTGTGACTGCAAAGTGGTTCCGGTCTTCGACCTTCAGAACTGGC 9993 | |||||||| | || || |||||| ||||| || ||||||||| | ||||||||| Sbjct 19508175 AGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGTCTTCGACGTGGAGAACTGGC 19508116 Query 9994 CTGGCAAAGAGGCGGCAGACG-CCGCGCTC--AAGCTCTGGATAGAGGCCGGTAAAGAGG 10050 | || | |||| ||| | | ||||||| |||||||||| || || || ||||| | Sbjct 19508115 CCGG---AAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGATCGACGCTGGGAAAGAAG 19508059 Query 10051 CCGACAGGCTGATCGAATCCGGCGAAGCTCGCACGGACAACGTGAACCGAGAAACCATCA 10110 || | ||| || | ||| ||| | || ||| | | |||| |||| || || |||| Sbjct 19508058 CCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGAGAACAAGGAGACGATCA 19507999 Query 10111 ACGCACTTCGCCGACGCCTAGCGCGTGGCGAGATCAACACGTCCCAACTCGCTGCTCTCG 10170 |||| || || || ||| | || |||||| || | |||| | | || |||| Sbjct 19507998 ACGCTCTCCGTCGCCGCTTGTATCGCGGCGAGTTCGCAATGTCCGA---CTACGCACTCG 19507942 Query 10171 CAGCGTAACTCACTGTTCAACGGCCCCCAGGTGGGGCCTATCAAGTATGCCCAGGAGGC 10229 | |||||| | | || ||||||||||| | ||||| ||||||||||||| Sbjct 19507941 CTGCGTAA-------TCCCCCGAACCCCAGGTGGGTTC-ATCAACCATGCCCAGGAGGC 19507891 Score = 140 bits (154), Expect = 1e-28 Identities = 272/393 (69%), Gaps = 14/393 (4%) Strand=Plus/Minus Query 11760 GAGGAGAAACA--TGGCGCAAGCCACCGC-GACTGACGTGACGGTGTTCTGGGCGCGTAC 11816 |||||| |||| |||| | || ||||| ||| ||||| | ||| ||||| Sbjct 19506150 GAGGAGTAACACATGGCCTACGCGACCGCTGAC-GACGTTGTGACGTTGTGGGCCAAGGA 19506092 Query 11817 GCCTACGACCGAAGAGGTCGCGCTGATCGACCGGCGACTGGAACAGGCTGAGCGGCTCCT 11876 |||| | | |||| | ||||||||||| || ||||| ||||||| ||||| | | Sbjct 19506091 GCCTGAGCCAGAAGTCATGGCGCTGATCGAGCGCCGACTCGAACAGGTCGAGCGCATGAT 19506032 Query 11877 CAAGAAGTCG-ATCCCCGATCTGGACGACCGCTGCGCTGCTGACCCCATCTTCAAGGCCG 11935 | | |||| ||||| |||||||||| | | || | ||| |||||| ||||| Sbjct 19506031 CCGGC-GTCGGATCCCAGATCTGGACGCCAGGGTGTCTTCGGAC---ATCTTCCGGGCCG 19505976 Query 11936 ACGTGATCGACATCGAGGCCGAGGCCGTGCTGAGGCTCGTCCGGAACCACGAGGGGTACA 11995 | ||||||||||||||||||| || |||||| | || || || |||| ||||| ||| Sbjct 19505975 ATCTGATCGACATCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAACCCGGAGGGCTACC 19505916 Query 11996 TCTCCGAGACGGACGGCAACTACACGTACATGCTCCAGGCTCAGGACCCGAACCGGAAGC 12055 |||| ||||| ||||| ||||| ||| |||||||||| | | | | |||| Sbjct 19505915 TCTCGGAGACCGACGGGGCGTACACCTACCAGCTCCAGGCTGATCTGTCTCAGGGCAAGC 19505856 Query 12056 TGGAGATCCTCCCCGAAGAGTGGGAGCTGTTGGGCATCAAGCGGACT----CGCATGGCG 12111 | | ||||| |||||||||| | ||||| |||| | |||| |||||| | Sbjct 19505855 TCGTCATCCTTGGCGAAGAGTGGACGACCTTGGGAGTCAA-CCGACTCTCGCGCATGTCC 19505797 Query 12112 ATCCTCGTTCCGGATGTGGTGATGCCGTCGTGA 12144 | | |||| ||| | | ||||||||| | ||| Sbjct 19505796 ACCATCGTCCCGAACATCGTGATGCCGACATGA 19505764 Score = 89.7 bits (98), Expect = 2e-13 Identities = 145/203 (71%), Gaps = 12/203 (6%) Strand=Plus/Minus Query 12166 AAGTCAACTCCACGGGGTGCGATCACTGGGCAGATCCTCCGGTGGTCAAGTGCATCCACG 12225 ||||| || || || |||||| ||| || ||||||||||| | | ||| |||||| Sbjct 19505694 AAGTCGACGCCGCGATGTGCGACCACGAAGCGGATCCTCCGGTCTGCTACTGCGTCCACG 19505635 Query 12226 ACTGGCGCATTGTCTGGGGCAACGTGCCCCGCACGATCA--CCG---GGGA-GTTCAAGC 12279 |||||||||| | | |||||||| | ||| | || ||| | || || || Sbjct 19505634 ACTGGCGCATCGAGTTCGGCAACGTCTCTCGCCAGCCCAAGCCGAAAGCGACGTACATCT 19505575 Query 12280 GATGAGCCTCCTGGAT-CAGGGCACCG--ACGA---CGTGATCGTCTACCCCGAAGAAGT 12333 |||||||||||| ||| | || ||| || | ||| |||||||||||||||| | Sbjct 19505574 GATGAGCCTCCTCGATACCGGAGCCCGGTACCAGCCGGTGCTCGTCTACCCCGAAGAGCT 19505515 Query 12334 CGTCATCGACAAGGACGGGAACA 12356 ||||||||| ||||||||||| Sbjct 19505514 GGTCATCGACGCGGACGGGAACA 19505492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158970202384448