Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_029018.1 Length=50856 Score E Sequences producing significant alignments: (Bits) Value seq18 453 4e-123 seq8 376 8e-100 seq9 311 3e-80 seq1 232 2e-56 >seq18 Length=36757632 Score = 453 bits (502), Expect = 4e-123 Identities = 624/876 (71%), Gaps = 70/876 (8%) Strand=Plus/Plus Query 34260 CATCGACAACCGAACTCGCCGGATGAAGTAGCGCGAGAAGATCGGGTGAATCCCCTCGGA 34319 || ||| ||||| | |||||||||||||| || |||||||||||||| || ||||| Sbjct 22717068 CACCGAGAACCGGATGCGCCGGATGAAGTACCGGGAGAAGATCGGGTGGATACCCTCACT 22717127 Query 34320 GACACCAGGCATCTTCGCGATGGTCCCCGTGGGGGCCACCGTGCGCTTCTTCACGGGCAC 34379 ||| ||||||||||||||||||||||| || |||||||||||||||||||| || ||||| Sbjct 22717128 GACTCCAGGCATCTTCGCGATGGTCCCTGTCGGGGCCACCGTGCGCTTCTTGACCGGCAC 22717187 Query 34380 CGGGATGCGGAGCTGGTGAGCGAACTCCTCAGCGGCCTTGTCGACCTCATGGGCCAAGTG 34439 |||||| || | || || ||||||||| || || ||||||||||| ||||| | Sbjct 22717188 CGGGATCCGCAACTCATGGCTGAACTCCTCGGCCGCTCTGTCGACCTCAGCGGCCATCTC 22717247 Query 34440 CCGCAGCACGTCCCGGAACGGACTG--GCCGGG-GCCTCGGAGTACCTCTTGCCGGTCAT 34496 ||||| | | |||| | || ||||| |||| || ||||| ||| |||| Sbjct 22717248 CCGCAAGAAAGCGGTGAACCGCTTGTCTCCGGGTGCCTGCGAATACCTACGGCCTGTCAG 22717307 Query 34497 CGCCAGGAACGAGGCCACACCAAGGTGGCCGACGCCGATCCGGCGGTTCCGGTCCAGCAC 34556 |||| | |||||||| || ||||| || || ||||| || ||||| || ||||| || Sbjct 22717308 GGCCAAATAGGAGGCCACTCCGAGGTGCCCAACACCGATGCGCCGGTTGCGATCCAGAAC 22717367 Query 34557 CTCCCTCGACTTCGGGTCCGCGACCTCCGAGAAGGTCGCCCGGATCAGGAACCGGGTGAT 34616 ||| | |||||| || |||||| | ||||| |||||||||||||||||||| || || Sbjct 22717368 CTCTCGGCTCTTCGGATCAGCGACCGCTGAGAACGTCGCCCGGATCAGGAACCGCGTCAT 22717427 Query 34617 CAGCCTGTGCGCCTTGTACAGCCCGAGGTAGTCCACCTTGTTGGTGTCCTCCCGGACGAA 34676 ||| | ||| || | ||| ||| |||||| ||| || | || |||||| Sbjct 22717428 CAGACGGTGGGCTCGGATCAGGTCGATGTAGTCGGTCTTCCCGG---CGTCGGTGACGAA 22717484 Query 34677 CGCGGCCAGGTTGACGTGGCCCAGGTTGCAGGGCTCCCACGGTTCGAGCGTGATCTCGCC 34736 ||| || ||||||| ||| || |||||||||||||||||||| || ||||||||||| || Sbjct 22717485 CGCCGCGAGGTTGATGTGCCCTAGGTTGCAGGGCTCCCACGGCTCCAGCGTGATCTCCCC 22717544 Query 34737 ACACGGGTTGGTGCAGACGACCTCGTTGGGCTCCCCGACGTTCGACAGCGACGAGTCCCA 34796 |||||||||||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct 22717545 GCACGGGTTGGTGCAGACGACCTCGTTGGGCTCACCGACGTTGGACAGGCTGCTGTCCCA 22717604 Query 34797 GAAGCCAGGCTCGCCGTTGGCGACCATGCCCTCGGTGA---TCTT--GCGGAGGATGTAC 34851 | || |||||||||||| || ||||||| || ||| || | ||| | Sbjct 22717605 CATCCCCGGCTCGCCGTTGCGTACGGCTCCCTCGGAGAGAGCCTTCAGCACCCGGTGTGC 22717664 Query 34852 --TC--------CGCGTTGCCACCGCCGA------TCTTCACCGCGTCCCAGAAGTCCTG 34895 || || |||| | ||| ||| || | |||||| | | Sbjct 22717665 CTTCGTGGAGCGCGGGTTGAGCGGGTCGACAGGAGCCTTGGCCAGGCTCCAGAACGCATC 22717724 Query 34896 GTCGACCTCCACCGAGATGTTCGTCGTCCAGTGCGACCCGGTGTCGGCCTTGATCCCGAC 34955 ||| ||||| |||||||||||||| |||||||| || ||| |||| |||||| | Sbjct 22717725 GTCCACCTCGACCGAGATGTTCGTGGTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGT 22717784 Query 34956 GAAC-----------------CGGTC------GAT------------------CTGCGGG 34974 |||| | ||| ||| |||| | Sbjct 22717785 GAACGTCTCCAGTGAGATCCGCTGTCCTGCTTGATGTTGGTGAACGTCTCGCCCTGCCAG 22717844 Query 34975 TCGTTCCAGTGCATCATCGCCATGCGAGCCGAGCGGCGAACGCCGCCAGCGACCACACAC 35034 || ||||||||||||||||||||||||||| |||||||| || || || ||||||||| Sbjct 22717845 TCCGCCCAGTGCATCATCGCCATGCGAGCCGACCGGCGAACACCTCCGGCCACCACACAC 22717904 Query 35035 TGCGCGATGGCGTGGTCGATCCCCATCGC--CGAGA 35068 ||||||||||||||||||||| ||||||| ||||| Sbjct 22717905 TGCGCGATGGCGTGGTCGATCTCCATCGCATCGAGA 22717940 Score = 392 bits (434), Expect = 1e-104 Identities = 320/388 (82%), Gaps = 3/388 (1%) Strand=Plus/Plus Query 48507 GAGAAGAGCACCGACTTGCGTCCGTTGATGCAGAGCCCGCAGCGAGCGCAGGCTGAACCC 48566 ||||| || || |||||||||||||||||| || ||||| | ||||||||| || ||| Sbjct 22719949 GAGAACAGAACGCTCTTGCGTCCGTTGATGCACAGACCGCACCTAGCGCAGGCCGATCCC 22720008 Query 48567 TTGTCGCTGATCAGCTCGATGGCTTTGTTGTTC---TCCGGGCACCGCGTGGCGTTCGGG 48623 ||| || ||||||| |||| | || ||||||| |||||||| ||| ||| ||||| Sbjct 22720009 TTGGCGTTGATCAGGTCGAAGTCTCGGTTGTTCAGCTCCGGGCAGCGCACGGCCGTCGGG 22720068 Query 48624 AACTGCGCCTTGCCTTCTGCGAAGGTCTGGTCGACGTAGGCGATGTTGATGCCCTTGCCT 48683 ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 22720069 AACTGTGCCTTGCCTTCGGCGAACGTCGTGTCGACGTAGGCGATGTTGATGCCCTTGCCT 22720128 Query 48684 TCGAGGAACCGTGCGACCTCGATGTTGTCTCGATCCGCGCTGAAGTAGAGCGCGAGGTTC 48743 || |||||||| || || || | |||||| |||||||||||||||| |||| |||||| Sbjct 22720129 TCCAGGAACCGGGCCACGTCTACGTTGTCGGGATCCGCGCTGAAGTACAGCGACAGGTTC 22720188 Query 48744 GACAGCTTCTGCGCGTGCAGGAACACGGCTGCCGTCTGAACCCTTGTGTATGCCCAGAAC 48803 ||||||||||| | ||||||| | || ||||| ||||||||||| ||||| ||||||||| Sbjct 22720189 GACAGCTTCTGTGAGTGCAGGTAGACCGCTGCGGTCTGAACCCTGGTGTAGGCCCAGAAC 22720248 Query 48804 TGCACGTCCGGGTTGTCGGCGATGACTTTCGCCCAGGCGGTGACGTACGTCGGGCTGAAG 48863 |||||||| | ||| |||||| |||||| || | |||||| |||||||||||| Sbjct 22720249 TGCACGTCGCTGAAGTCTCGGATGACACGCGCCCACGCTGCGACGTAGGTCGGGCTGAAG 22720308 Query 48864 AAGTCTCCGTCCCAGTGGATGCGGAACA 48891 ||||| || ||||||||||| ||||||| Sbjct 22720309 AAGTCGCCATCCCAGTGGATACGGAACA 22720336 Score = 311 bits (344), Expect = 3e-80 Identities = 539/769 (70%), Gaps = 26/769 (3%) Strand=Plus/Plus Query 43156 GTAGCTCACGTCGCAAAAAGCGCACTTATCCGGCTCTGGGTCCGGGTCAAAGCGCTCGGC 43215 |||| ||| || || || ||| || ||||| || || |||||| || | ||| Sbjct 22718031 GTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAACATCGAGGC 22718090 Query 43216 GGCGATGTTCTCTTCCAGTTCGCGGAACTTCTCCGCGACCCTCTCGCGGGGCCACTCCCC 43275 ||||| || || | | |||||| ||| | || || || | ||||| | Sbjct 22718091 TGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGT 22718150 Query 43276 CAAGTCGTAGGGGTACGTCGGCTT----GCCTTTCACGCCTTTCTTCCCGGCCATGTAGT 43331 || ||||||||| | |||||||| ||||| ||| |||||||| ||||| ||| Sbjct 22718151 CAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTT----GCCCTTCTTCCCCACCATGAAGT 22718206 Query 43332 AGTCCCCGATCTGCGGGGGCTCGATGCCGTAGGTCTCGGCCAGGGCAA-CGCTGTAGACG 43390 |||| ||| ||| ||| | ||||| ||||||||| || | || | ||| ||| ||| Sbjct 22718207 AGTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCGC-GTACACG 22718265 Query 43391 CCAAGCTGGAAGTCGTCACCGGGGGTGTTGCCGGTCTTGTAGTCCCGGACGATCACGTTG 43450 || ||||||||||||||||| || ||| |||||||||||||||||||| | | Sbjct 22718266 CCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCC 22718325 Query 43451 CCGTCGCTGTCCCTCAGCACGGCGTCGATGTAGCCCCGGACCAAGACTCCGTCGAGGTCG 43510 ||||| | || | |||||||||||||| || || |||| || |||||||| ||| Sbjct 22718326 CCGTC---GACCACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTCGAGCTCG 22718382 Query 43511 ATGTCGAAGCCCAGCTCGATGCCTGGGGTGCCGTCAGGGGCGATCCAGATGACCT-CTTC 43569 || |||||| ||||||||| |||| || ||||| |||| | |||||| ||| | Sbjct 22718383 ATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTCCTGGCCC 22718442 Query 43570 GGGGTGACCTTCGGTCCAGGCGAAGAACTTCTCGATCTGCTCCAGCCCGATATGCCAACG 43629 || || || || ||| |||||||||||||||| ||||||||| |||| | || Sbjct 22718443 GGAGTCTCC--CG--CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGTGTACCG 22718498 Query 43630 GCGTTCGAGATCGCTCGCGCCGTCGTAGCGGCCCGACCGGAACCACCAGTCGAAGTTCGG 43689 ||| |||| || | | |||| ||| | || |||| |||||| ||||||||||| Sbjct 22718499 GCGCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACTCGAAGTTCGG 22718558 Query 43690 GGTCACGTCGGTGTACTGCGAC-ACCTCTTTGGCGTACTCCTCCTTGAACATCTCCTGGG 43748 |||| | |||||| | || | || || |||||||| | | |||||| |||| || Sbjct 22718559 GGTCTCCTCGGTG-AAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATGTCCTTGG 22718617 Query 43749 CCTCTTCAAGGCTCATCGGATCACCGTCGAGTTCCC--GCCTGCGGTACTCCTCCAGGAC 43806 |||| ||||| ||| ||| |||| | |||| ||| | | |||| ||| Sbjct 22718618 CCTCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCT--CGACCGCCTCAGCGAC 22718675 Query 43807 GGTGTGGACTGCGCTCCCCTGCGGGAGCCAGGCGGCTGGCCTCTGCCATACCTTGTCGAC 43866 | ||||| || |||||||||| |||||||| ||||||| |||||| |||||||||| Sbjct 22718676 AGCGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTTGTCGAT 22718735 Query 43867 GCGGGCCAGCTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGAGCTG 43914 || || |||||||| || | |||||| | |||||| |||| ||| Sbjct 22718736 CCGAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGATCTG 22718783 >seq8 Length=24646021 Score = 376 bits (416), Expect = 8e-100 Identities = 635/919 (69%), Gaps = 48/919 (5%) Strand=Plus/Minus Query 11488 GGCCTTCCTGACTCCCGAGCAGAGCCAGGACTACTTCGCGGAGATCGAGAAGACCTCGAT 11547 || || |||| ||||||||| |||| |||||||| ||| ||||||||||||||| Sbjct 19507252 GGGCTACCTGGAGCCCGAGCAGGCGAAGGATTACTTCGCCGAGGCCGAGAAGACCTCGAT 19507193 Query 11548 TGTCCAGCGGATCGCCCGCAAGGTCCCGATGGGTCCGACCGGCATCAGCATCCCCCACTG 11607 ||||||| | |||||| ||||| ||||||||| | || ||| | ||||| ||||| Sbjct 19507192 CGTCCAGCAGTTCGCCCAGAAGGTGCCGATGGGTACCACGGGCCAGAAGATCCCGCACTG 19507133 Query 11608 GACCGGTGCCGTCTCGGCGTCGTGGACCGGCGAGGCCGAGCGCAAGCCGATCACCAAGGG 11667 | ||| | ||| || ||||| ||| |||| || ||||| ||||||||||| Sbjct 19507132 GGTCGGCGACGTGAGTGCCCAGTGGATCGGTGAGGGTGACATGAAGCCCATCACCAAGGG 19507073 Query 11668 TTCGTTCGGCAAGCAGGAACTGGAGCCGGTGAAGATCACCACGATCTTCGCAGAGAGCGC 11727 | |||| | | ||| |||||| | |||||||||| | | || Sbjct 19507072 CAACATGACTTCGCAGACCATCGCGCCCCACAAGATCGCGACGATCTTCGTGGCGTCTGC 19507013 Query 11728 TGAAGTCGTGCGTCTCAACCCGCTCAACTACCTGAACACCATGCGGACCAAGATCGCCGA 11787 || ||| ||| |||||| |||||||||| |||||||| |||||| | || Sbjct 19507012 GGAGACCGTCCGTGCCAACCCCGCCAACTACCTGGGAACCATGCGTACCAAGGTGGCGAC 19506953 Query 11788 GGCCATCGCGCTCAAGTTCGACGCGGCTGCCATCCACGGCATCGACAAGCCGTCTGCGTT 11847 ||| ||||| | |||||||| || || || ||||||| ||||| ||| |||| Sbjct 19506952 CGCCTTCGCGATGGCGTTCGACGGCGCGGCGATGCACGGCACCGACA-GCC-----CGTT 19506899 Query 11848 CAAGGGCTACCTGGCCGAGACGACCAAGGTCGTGTCGCTGGCCGACACCAACCTGACCAC 11907 | | |||| | | |||| ||||||| | | ||| | || ||||||| | |||| Sbjct 19506898 CCCGACCTACATCGGTCAGACCACCAAGGCCATCTCGATTGCTGACACCACCGGTGCCAC 19506839 Query 11908 GGCGTCGGGTCCGCAGGGCAACGCCTACCTGGCGGTCAACAACGCCCTGTCGCTCCTGGT 11967 | | || || || ||| || || | |||| |||| || ||||| Sbjct 19506838 GAC--CGTGTACG-------------ACCAGGTGGCCGTGAACGGCCTGAGCCTGCTGGT 19506794 Query 11968 GAACAGCGGCAAGAAGTGGACCGGCACCCTGCTGGACAACGTCACCGAGCCGATCCTCAA 12027 |||| |||||||||||||||| |||||| |||||| || |||||||||||||||| || Sbjct 19506793 GAACGACGGCAAGAAGTGGACCCACACCCTTCTGGACGACATCACCGAGCCGATCCTGAA 19506734 Query 12028 CACGGCGGTCGACGGCAACGGTCGTCCTCTGTTCGTGGAGTCGACCTACACCGAGCAGGT 12087 | ||| ||| |||||||| || |||||| | |||||||||||| ||| | Sbjct 19506733 CGGCGCGAAGGACCAGAACGGTCGCCCGCTGTTCATCGAGTCGACCTACGGTGAGGCCGC 19506674 Query 12088 CGGCGCGATCCGTGAGGGCCGCATCCTGGGTCGTCCCACCTACGTCGCGGACAACGTGGT 12147 || || ||||| |||||| ||| | | ||||| ||| | || ||| |||| || Sbjct 19506673 GAGCCCGTTCCGTTCGGGCCGGATCGTCGCCCGTCCGACCATCCTCAGCGACCACGTCGT 19506614 Query 12148 CAACGGCACCGTTGGCAACCGCGTGGTCGGCGTCATGGGCGACTTCAGCCAGGTCATCTG 12207 | |||||| || ||||||| ||||||| |||||| |||| ||||||| Sbjct 19506613 GGAGGGCACC-------AC-----GGTCGGCTTCATGGGTGACTTCTCCCAGCTCATCTG 19506566 Query 12208 GGGCCAGATCGGCGGTCTGTCCTTCGACGTGACCGACCAGGCCACCCTGGACTTCGGTGA 12267 ||||||||||||||||||||||||||||||||| || ||||| |||||| || Sbjct 19506565 GGGCCAGATCGGCGGTCTGTCCTTCGACGTGACGGATCAGGCGACCCTGAAC-------- 19506514 Query 12268 GGAACAGGGCGGCGTGTGGGTGCCC-AAGCTGATCTCGCTGTGGCAGCACAACATGGTCG 12326 | |||| ||| | | |||| || | |||||||||||||||||||| | |||| Sbjct 19506513 ----CTGGGCACCGT-CGAGAGCCCGAACTTCGTCTCGCTGTGGCAGCACAACCTCGTCG 19506459 Query 12327 CTGTCCGTTGCGAAGCTGAGTTCGCGTTCATGGTCAACGACAAGGACGCGTTCGTGAAGC 12386 | |||||| ||| ||||||| ||||||| ||||||| || |||||||| | Sbjct 19506458 CAGTCCGTGTCGAGGCTGAGTACGCGTTCCACTGCAACGACGCCGAGGCGTTCGTCGCTC 19506399 Query 12387 TGACCGACCAGGTC-GCGG 12404 ||||| || |||| |||| Sbjct 19506398 TGACCAACGTGGTCAGCGG 19506380 Score = 316 bits (350), Expect = 7e-82 Identities = 529/756 (70%), Gaps = 39/756 (5%) Strand=Plus/Minus Query 10181 CGGACCTTCTACGACGCTCAACGCGCACTCCACCACCCGGAGCTGGACCCCAACGAGAGG 10240 ||||| ||||||||| | || ||| |||||||||||||||||| || |||||||||| Sbjct 19508613 CGGAC-TTCTACGACTCCCAGCGCAGACTCCACCACCCGGAGCTTCCCCGCAACGAGAGG 19508555 Query 10241 TTGCTGTCCGAGCTTCGGTTCGAGTGGTTCGTGCAGAACATGGAGCCCGCACGCGTCAAG 10300 |||| | ||| || | || ||||||||||| |||||||||||||||||| | Sbjct 19508554 TTGCGGAGCGACCTCCAGTGGGAGTGGTTCGTCAGGAACATGGAGCCCGCACGAAAGGGG 19508495 Query 10301 TTCTCCCAGGAGGAGGCCGGTGACGCAGGCGTGGCCCAGGTCGCGCTA-CGAGCAGTGCG 10359 || || |||| || | | | || | || || || | | | ||| ||||||| Sbjct 19508494 TTGTCGCAGGCCGACTCTCCTCAAGCTGCGGTCACCAAGCTGACCTTGGCGA-CAGTGCG 19508436 Query 10360 CGAAGTCGAGATGGCAGGACGCCGACAGATCATCGGGGCGGTCAAAGACGACCCCGCTCC 10419 |||||| ||||||||||| ||||||||||||||||| || ||||| ||||||| ||||| Sbjct 19508435 CGAAGTGGAGATGGCAGGTCGCCGACAGATCATCGGCGCTGTCAAGAACGACCCAGCTCC 19508376 Query 10420 CCGCATCATTCGCGGGTGGGCGCGAGTGGCCACTGGTCGAGAGACCTGTGCCTGGTGCCT 10479 | ||| | || |||||| | || ||||| || || || || || |||||||| || Sbjct 19508375 TCAGATCGTGAAGGGCTGGGCGAGGGTCGCCACCGGGCGCGAAACATGCGCCTGGTGTCT 19508316 Query 10480 GATGCTCATCTCCCGAGGGCCTGTGTACCTCGGGGCCACCAACGCCGGCCTAGACCTCGA 10539 |||||| || ||||| || || | |||||| ||| | || || || ||||||| Sbjct 19508315 GATGCTGATTTCCCGTGGCCCCGAGTACCTTTCGGCGGATAGCGGGGGTCTTCACCTCGA 19508256 Query 10540 TGACGACTCGGCAGCCGAGAT---GATCGCTGCCGGT---------GAGGATGTCAGCGA 10587 ||| | | | ||| | || || || || ||| | || |||| Sbjct 19508255 CACCGAGACCGTGGTCGACCTCTGGAACGAGGCTGGCCGCGATCTGGAGAAGTTCCGCGA 19508196 Query 10588 GTA------------CATGGAGCAGTGGCACGCCGGGTGCGACTGCAAAGTGGTGCCGGT 10635 | ||| ||| |||||||||| |||||||||||| |||||||| || Sbjct 19508195 AGAGACCAAGCCCCACATCGAGGAGTGGCACGCAGGGTGCGACTGCCTGGTGGTGCCTGT 19508136 Query 10636 CTTCAAGGTGGACGACTGGCCCGGTTTGGAAGCCCAGAAGCGGGCTCTCCGGTTGTGGAT 10695 |||| | ||||| |||||||||| || || ||| | || ||||| | | | ||||| Sbjct 19508135 CTTCGACGTGGAGAACTGGCCCGGAAAGGCCGCACAGGAACGCGCTCTGCAGCTCTGGAT 19508076 Query 10696 CGACGCAGGGCGCGAAGCGTCCCGGTTGATCGAGTCGGGCAAGGCCCGGACCAACAACAT 10755 |||||| ||| ||||| || | | || | || ||||||||||| |||| ||| Sbjct 19508075 CGACGCTGGGAAAGAAGCCAGCCAGCTCATTGCATCTGGCAAGGCCCGCTCCAAAAACGA 19508016 Query 10756 GAACAAGGAGACGCAGAACGCGCTCCGTCGTCGCCTCGAACGGGGCGAAGTTCGC-ATGT 10814 ||||||||||||| ||||| |||||||| ||| | | || |||| ||||||| |||| Sbjct 19508015 GAACAAGGAGACGATCAACGCTCTCCGTCGCCGCTTGTATCGCGGCG-AGTTCGCAATGT 19507957 Query 10815 CCGAATTCGCTGCTGCTGCAGCGTAGTTCATCCCATCCAAGCCCCCAGGTGGGGCTGTCA 10874 |||| | ||| || || ||||| ||||| || | ||||||||||| ||| Sbjct 19507956 CCGACTACGC-ACT--CGCTGCGTA----ATCCC--CCGA-ACCCCAGGTGGGTTCATCA 19507907 Query 10875 CCTATGCCCAGGAGGCAATCCAACATGTCCGATACC 10910 | ||||||||||||| | |||||||||| ||| Sbjct 19507906 ACCATGCCCAGGAGGCGAAAACACATGTCCGACACC 19507871 Score = 114 bits (126), Expect = 4e-21 Identities = 201/288 (70%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 12785 GTCGAGCGGATGATCAAGCGGCGCATCCCGGACCTGGCCACCAAGGTCACCGACCCGGAC 12844 |||||||| |||||| ||| || ||||| || |||| | ||| ||| | ||||| Sbjct 19506045 GTCGAGCGCATGATCCGGCGTCGGATCCCAGATCTGGACGCCAGGGTGTCTT---CGGAC 19505989 Query 12845 TACCTC---GAAGACCTCAAGCAGGTCGAAGCGGATGCCGTTCTGCGGCTTGTCCGTAAC 12901 | || | || || | | |||| || || || || ||||| || || |||||| Sbjct 19505988 ATCTTCCGGGCCGATCTGATCGACATCGAGGCCGACGCGGTGCTGCGTCTGGTGCGTAAC 19505929 Query 12902 CCCGAGGGCTACCTGTCGGAGACCGACGGCAACTACACGTACATGCTCCGGTCTGACCTC 12961 || ||||||||||| |||||||||||||| ||||| ||| ||||| | |||| || Sbjct 19505928 CCGGAGGGCTACCTCTCGGAGACCGACGGGGCGTACACCTACCAGCTCCAGGCTGATCTG 19505869 Query 12962 GC-CAGCGGGAAGCTGGAGATCTTCCCCGAGGAGTGGGAGATCCTGGG---CTACCGCAG 13017 | ||| || ||||| | ||| | ||| |||||| || | |||| | |||| Sbjct 19505868 TCTCAG-GGCAAGCTCGTCATCCTTGGCGAAGAGTGGACGACCTTGGGAGTCAACCGACT 19505810 Query 13018 ATCTCGCATGACGGTGATCGTCCCGAATCCGGTGATGCCGACATGAGC 13065 || |||||| | ||||||||||| ||||||||||||||||| Sbjct 19505809 CTCGCGCATGTCCACCATCGTCCCGAACATCGTGATGCCGACATGAGC 19505762 Score = 86.0 bits (94), Expect = 2e-12 Identities = 118/166 (71%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 13190 GATGAGCCTTCTCGATGGCGGTCCCGCCTACGAGGACGTGATCGTCTACCCCGAAGAGGT 13249 ||||||||| |||||| ||| || ||| || ||| ||||||||||||||||| | Sbjct 19505574 GATGAGCCTCCTCGATACCGGAGCCCGGTACCAGCCGGTGCTCGTCTACCCCGAAGAGCT 19505515 Query 13250 CGTCACNNNNNNNNNNGGCAACACCCAGACCCGCCCATCCAAGACCGGCATCCCGGCCAA 13309 |||| || |||| |||||| || || |||||| |||| || | Sbjct 19505514 GGTCATCGACGCGGACGGGAACAAGAAGACCCAGCCGTCGAAGACCCCGATCCAAGCGAT 19505455 Query 13310 GGCGCGATTCCAGGT-GCAAGGCCAGTCCGGTACGTCGGCACGACG 13354 || || |||||||| || | |||||||||||||||||||||||| Sbjct 19505454 CGCACGCTTCCAGGTCGCCAA-CCAGTCCGGTACGTCGGCACGACG 19505410 >seq9 Length=46179939 Score = 311 bits (344), Expect = 3e-80 Identities = 539/769 (70%), Gaps = 26/769 (3%) Strand=Plus/Minus Query 43156 GTAGCTCACGTCGCAAAAAGCGCACTTATCCGGCTCTGGGTCCGGGTCAAAGCGCTCGGC 43215 |||| ||| || || || ||| || ||||| || || |||||| || | ||| Sbjct 16532313 GTAGGACACATCACAGAATTTGCATTTGTCCGGTTCCGGCAACGGGTCGAACATCGAGGC 16532254 Query 43216 GGCGATGTTCTCTTCCAGTTCGCGGAACTTCTCCGCGACCCTCTCGCGGGGCCACTCCCC 43275 ||||| || || | | |||||| ||| | || || || | ||||| | Sbjct 16532253 TGCGATACCTTCCTCGACCCTGTGGAACTCCTCGGTGATGGCTTCACGCGTCCACTTCGT 16532194 Query 43276 CAAGTCGTAGGGGTACGTCGGCTT----GCCTTTCACGCCTTTCTTCCCGGCCATGTAGT 43331 || ||||||||| | |||||||| ||||| ||| |||||||| ||||| ||| Sbjct 16532193 CAGGTCGTAGGGCTTGGTCGGCTTCGGTGCCTT----GCCCTTCTTCCCCACCATGAAGT 16532138 Query 43332 AGTCCCCGATCTGCGGGGGCTCGATGCCGTAGGTCTCGGCCAGGGCAA-CGCTGTAGACG 43390 |||| ||| ||| ||| | ||||| ||||||||| || | || | ||| ||| ||| Sbjct 16532137 AGTCGCCGGTCTTCGGAGCCTCGACACCGTAGGTCATCGCGACCGCGAGCGC-GTACACG 16532079 Query 43391 CCAAGCTGGAAGTCGTCACCGGGGGTGTTGCCGGTCTTGTAGTCCCGGACGATCACGTTG 43450 || ||||||||||||||||| || ||| |||||||||||||||||||| | | Sbjct 16532078 CCGAGCTGGAAGTCGTCACCCGGTTGGTTCCCGGTCTTGTAGTCCCGGACTCGAAGCTCC 16532019 Query 43451 CCGTCGCTGTCCCTCAGCACGGCGTCGATGTAGCCCCGGACCAAGACTCCGTCGAGGTCG 43510 ||||| | || | |||||||||||||| || || |||| || |||||||| ||| Sbjct 16532018 CCGTC---GACCACGACGACGGCGTCGATGTATCCGCGAACCAGGATCCCGTCGAGCTCG 16531962 Query 43511 ATGTCGAAGCCCAGCTCGATGCCTGGGGTGCCGTCAGGGGCGATCCAGATGACCT-CTTC 43569 || |||||| ||||||||| |||| || ||||| |||| | |||||| ||| | Sbjct 16531961 ATCTCGAAGTACAGCTCGATCGCTGGCGTACCGTCCGGGGTCACCCAGATCTCCTGGCCC 16531902 Query 43570 GGGGTGACCTTCGGTCCAGGCGAAGAACTTCTCGATCTGCTCCAGCCCGATATGCCAACG 43629 || || || || ||| |||||||||||||||| ||||||||| |||| | || Sbjct 16531901 GGAGTCTCC--CG--CCACGCGAAGAACTTCTCGACCTGCTCCAGGCCGACGGTGTACCG 16531846 Query 43630 GCGTTCGAGATCGCTCGCGCCGTCGTAGCGGCCCGACCGGAACCACCAGTCGAAGTTCGG 43689 ||| |||| || | | |||| ||| | || |||| |||||| ||||||||||| Sbjct 16531845 GCGCTCGATGTCTCGCTGACCGTTGTACGGACCAGACCACGTCCACCACTCGAAGTTCGG 16531786 Query 43690 GGTCACGTCGGTGTACTGCGAC-ACCTCTTTGGCGTACTCCTCCTTGAACATCTCCTGGG 43748 |||| | |||||| | || | || || |||||||| | | |||||| |||| || Sbjct 16531785 GGTCTCCTCGGTG-AAGGCTCCAACGTCGTTGGCGTAGTGCCAACGGAACATGTCCTTGG 16531727 Query 43749 CCTCTTCAAGGCTCATCGGATCACCGTCGAGTTCCC--GCCTGCGGTACTCCTCCAGGAC 43806 |||| ||||| ||| ||| |||| | |||| ||| | | |||| ||| Sbjct 16531726 CCTCGTCAAGCGTCAGCGGCATGCCGTAGGACTCCCATACCT--CGACCGCCTCAGCGAC 16531669 Query 43807 GGTGTGGACTGCGCTCCCCTGCGGGAGCCAGGCGGCTGGCCTCTGCCATACCTTGTCGAC 43866 | ||||| || |||||||||| |||||||| ||||||| |||||| |||||||||| Sbjct 16531668 AGCGTGGAACGCAGTCCCCTGCGGCAGCCAGGCCGCTGGCCGCTGCCACACCTTGTCGAT 16531609 Query 43867 GCGGGCCAGCTTGTA-GCTGTAGGGGCACCGCTCGTACTGCTTGAGCTG 43914 || || |||||||| || | |||||| | |||||| |||| ||| Sbjct 16531608 CCGAGCGAGCTTGTACGCCAT-CGGGCACTTCGTGTACTGGTTGATCTG 16531561 Score = 275 bits (304), Expect = 2e-69 Identities = 224/271 (83%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 48507 GAGAAGAGCACCGACTTGCGTCCGTTGATGCAGAGCCCGCAGCGAGCGCAGGCTGAACCC 48566 ||||| || || |||||||||||||||||| || ||||| | ||||||||| || ||| Sbjct 16530395 GAGAACAGAACGCTCTTGCGTCCGTTGATGCACAGACCGCACCTAGCGCAGGCCGATCCC 16530336 Query 48567 TTGTCGCTGATCAGCTCGATGGCTTTGTTGTTC---TCCGGGCACCGCGTGGCGTTCGGG 48623 ||| || ||||||| |||| | || ||||||| |||||||| ||| ||| ||||| Sbjct 16530335 TTGGCGTTGATCAGGTCGAAGTCTCGGTTGTTCAGCTCCGGGCAGCGCACGGCCGTCGGG 16530276 Query 48624 AACTGCGCCTTGCCTTCTGCGAAGGTCTGGTCGACGTAGGCGATGTTGATGCCCTTGCCT 48683 ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 16530275 AACTGTGCCTTGCCTTCGGCGAACGTCGTGTCGACGTAGGCGATGTTGATGCCCTTGCCT 16530216 Query 48684 TCGAGGAACCGTGCGACCTCGATGTTGTCTCGATCCGCGCTGAAGTAGAGCGCGAGGTTC 48743 || |||||||| || || || | |||||| |||||||||||||||| |||| |||||| Sbjct 16530215 TCCAGGAACCGGGCCACGTCTACGTTGTCGGGATCCGCGCTGAAGTACAGCGACAGGTTC 16530156 Query 48744 GACAGCTTCTGCGCGTGCAGGAACACGGCTG 48774 ||||||||||| | ||||||| | || |||| Sbjct 16530155 GACAGCTTCTGTGAGTGCAGGTAGACCGCTG 16530125 >seq1 Length=46747018 Score = 232 bits (256), Expect = 2e-56 Identities = 183/212 (86%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 3712 CCACTGACGTGTAGCTCAATTGGCAGAGCACCCGGCTGTTAACCGGGCGGTTGAAGGTTC 3771 |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| Sbjct 34903450 CCACTGACGTGTAGCTCAAT-GGCAGAGCATCCGGCTGTTAACCGGACGGTTGAAGGTTC 34903392 Query 3772 GAGTCCTTCCATGTCAGCCATGCGAGCGGTTCCTGCCGTATCG-GAGGAGCCCTCGCACA 3830 |||||||||| |||||||| ||| |||||||| || | || | ||||||| ||||| Sbjct 34903391 GAGTCCTTCCTCGTCAGCCAAGCGGGCGGTTCC--CCAGAGCGTGGGGAGCCCCCGCACC 34903334 Query 3831 TAG-GCACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTCG 3889 || ||||||||||||||||| ||||||| |||||||||||||||||| | |||||||| Sbjct 34903333 AAGTACACGTAGCTCAATTGGT-AGAGCAGTGGTCTCCAAAGCCGCCGGTTCCAGGTTCG 34903275 Query 3890 AGTCCTGCCGTGTCTGCAACCACCCAGTTCCC 3921 | ||||| ||||| ||| ||||||| ||||| Sbjct 34903274 ACTCCTGGCGTGTATGCCACCACCC--TTCCC 34903245 Score = 147 bits (162), Expect = 7e-31 Identities = 223/310 (72%), Gaps = 7/310 (2%) Strand=Plus/Minus Query 614 GCGGGCTGGATCTGTGAGATCGGTTGGTCCGGTTGCCTGCTTGAGGCGACCGAGGTCGAC 673 || || ||| | |||||| ||| | |||| ||| | | | || ||||| || ||| Sbjct 34905229 GCCGGGTGGCTGTGTGAGGTCGACGGCCCCGGCTGCGTCCGGGCTGCCACCGACGTAGAC 34905170 Query 674 CACATCCGTCGTGGTGACGACCATTCACGCGCCAACCTACGAGCCGCGTGCTC-GTCGTG 732 |||| | || ||||||| || || ||||||| | ||| ||| ||| || Sbjct 34905169 CACAAGAAGCCAGGGAACGACCACTCGCGGTCCAACCTGCAAGCGATCTGCCGTGTC-TG 34905111 Query 733 CCACGGCAAGAAGTCATCCGCTGAGGGCAACGCCCGGAAGCGGCAGTTACGAGCCAGGAG 792 |||||||||||||||| ||||||||||| ||||| |||| | | ||| |||| Sbjct 34905110 CCACGGCAAGAAGTCAGCCGCTGAGGGCGTAGCCCGACGGCGGGAACTCAAGGCCCGGAG 34905051 Query 793 GAAGCGACC-GACCGAACGCCACCCTGGCCG-CATATAGCGGGCCAGGAGCCCGCTGACC 850 ||||||||| || | ||||||||||||| || | | ||||||||||| ||| ||| || Sbjct 34905050 GAAGCGACCAGAAC-AACGCCACCCTGGGCGTCGTTAAGCGGGCCAGGTGCCTGCT--CC 34904994 Query 851 ACCCAGGAGGTGACAGTGGGCGAACGAGGCCCTGTGCGTAAACGGTCGGATCAACGCGTC 910 |||||||||||||| |||||| ||| ||||| | | ||||| || ||||||| Sbjct 34904993 ACCCAGGAGGTGACTGTGGGCACACGCGGCCCCATCGGAAAACGCGACGAAGAACGCGTT 34904934 Query 911 CGACGCAACA 920 || ||||||| Sbjct 34904933 CGTCGCAACA 34904924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162614942828416