Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_029021.1 Length=60747 Score E Sequences producing significant alignments: (Bits) Value seq1048 105 3e-18 >seq1048 Length=3623 Score = 105 bits (116), Expect = 3e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 22096 CAAACAGCGCGTAAGATTGGTGGCGCCTCGTTCGACGGTACTGCTGACGTCAATCTTCCA 22155 ||||| || || | |||||||| | || || || || | || ||||||| || Sbjct 2330 CAAACCGCTCGCCATATTGGTGGTGTTAGTTTTGATGGCTCTACCGATATCAATCTGCCT 2271 Query 22156 GGTGTTAACATTCAGGGTAATCAGAACACAACTGGTAATGCGGCAACTGCTACCAAACTA 22215 ||||| || |||||||||||||||||||| ||||||||||| || ||||| |||||||| Sbjct 2270 GGTGTAAATATTCAGGGTAATCAGAACACCACTGGTAATGCCGCCACTGCAACCAAACTG 2211 Query 22216 CAGACAGCACGTAGGATTGCCAATGTACCTTTTGATGG 22253 || || |||| | ||| || |||| | || ||||| Sbjct 2210 CAAACGCCACGGACAATTAACAGTGTAACGTTCGATGG 2173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194265625647808