Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=46747018 Score = 82.4 bits (90), Expect = 5e-11 Identities = 55/60 (92%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 5357 GTAGCTCAATTGGCAGAGCGTCCGACTGTTAATCGGATGGTTGAAGGTTCGAGTCCTTCC 5416 |||||||||| |||||||| |||| ||||||| |||| |||||||||||||||||||||| Sbjct 34903440 GTAGCTCAAT-GGCAGAGCATCCGGCTGTTAACCGGACGGTTGAAGGTTCGAGTCCTTCC 34903382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299316580376768