Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq82 95.1 1e-14 >seq82 Length=657493 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 137299 ATAATATGAGTATAAGAACGAGAATGAATTGTTTCGCTGAATGTCCATGTTTGAACCCAT 137358 |||||||||||||||||||| || ||||| ||||| || | |||||||| || ||| Sbjct 459124 ATAATATGAGTATAAGAACGTGAGTGAATAGTTTCCGAAAAAGACCATGTTTCAATCCAG 459183 Query 137359 GTTTC-AAAGCCGACATCAGAGATCAACGGCGCAAATGCCAGAGCTGGAGCTCGTCCTTG 137417 ||||| || ||| || ||| || | || ||| || | ||| || |||||| Sbjct 459184 GTTTCTAATTCCGGAAT-AGAAATAATTGGTAGAAAAGCAATGTTAGGACTTCTTCCTTG 459242 Query 137418 AATAGAATCAAGCAGTGTCTGATATTTTAAGTTATCGGTAAAAATACCCTTTTCATGTTC 137477 |||||| || | | ||| ||||||||||| ||| ||||||| ||||||||||| Sbjct 459243 AATAGAGTCTAATAATGTTTGATATTTTAAATTACTAAGAAAAATATGTTTTTCATGTTC 459302 Query 137478 CTGTAATTT 137486 |||| || Sbjct 459303 AGGTAAATT 459311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522106219618560