Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq82 86.0 9e-12 >seq82 Length=657493 Score = 86.0 bits (94), Expect = 9e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 99525 GACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTGGCT 99584 || |||||||| || || || |||||| | ||||| ||||| ||| |||||||| Sbjct 104620 GATCGTACTGGTACAGGCACTTTGTCTATTTTTGGTCATCATATGAAATTTAATTTAAAA 104679 Query 99585 GAAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTCATGAACTC 99644 |||| |||||||| || || || || ||||| | | |||||||| || ||||| Sbjct 104680 AAAGGATTTCCTCTTGTTACCACAAAAAAATGTCATATTCCATCTATTATACACGAACTA 104739 Query 99645 CTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTCACTATC 99704 | ||||| | ||||| ||||| || | | || || || | || | ||||| Sbjct 104740 TTATGGTTTTTAAAAGGTGATACTAACATTAAATATCTTAATCAAAATAAAATATCTATC 104799 Query 99705 TGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTGG 99761 |||||| | |||| | | || | || || | || || |||| ||||| || ||| Sbjct 104800 TGGAATAATTGGGCAGATGAACAAGGAGAAGTTGGTCCAATATATGGAAAACAATGG 104856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734262570466560