Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq82 109 2e-19 >seq82 Length=657493 Score = 109 bits (120), Expect = 2e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 36480 ACAATCTCTGTGGTGTATCTGTCTATTCCGTTGCTGTCAGTCCATTTACGAGTACGAAGC 36539 ||||| ||||| ||||| | |||| || || || |||||| | ||| | | Sbjct 205896 ACAATTTCTGTAGTGTAGCGTTCTAAACCATTTTGATCCTGCCATTTTCTAGTTTGCAAT 205955 Query 36540 TGGCCTTCGATGTAAACCTGCGAACCTTTTCGAAGGTATTCTCCTGCAACTTCCGCAAGT 36599 ||||| || || || || |||||||||||||| ||||| ||||||| ||| || | | Sbjct 205956 GATCCTTCAATATATACTTGAGAACCTTTTCGAAGATATTCGCCTGCAATTTCAGCTAAT 206015 Query 36600 TTCCCGAATATGACAATACGATGCCACTCTGTCTGTTCTTTCTTTTCTCCTGTCTGCTTA 36659 || || |||| || || | |||||| || || | |||||| |||||||| || | ||| Sbjct 206016 TTACCAAATAAAACTATTCTATGCCATTCAGTTTTTTCTTTATTTTCTCCAGTATTTTTA 206075 Query 36660 TCTTTCCACTGCTCAGATGTTGC 36682 |||||||| | || || ||||| Sbjct 206076 TCTTTCCAATTTTCTGAAGTTGC 206098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152080714960512