Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq7 118 7e-22 seq6 105 4e-18 seq4 105 4e-18 seq3 105 4e-18 seq5 104 2e-17 seq2 104 2e-17 seq8 86.0 4e-12 >seq7 Length=41685129 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| | ||||||||||| | || || ||||| ||||||||||||| Sbjct 26880630 TCCTCCTCTCAGGCGTAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 26880571 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280 |||| | |||| || | |||||| || ||||| || || ||||||||||| | ||| Sbjct 26880570 CAGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCTGGCGG 26880511 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || |||||||| ||||| ||| | || | | |||| |||| ||||||| Sbjct 26880510 GATCCCT-TCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGA 26880452 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | || || || || || || || |||||||| ||||||||||| Sbjct 26880451 CCTCTAGGGTTATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 26880403 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG-ACAGCTGACGGTCGTC 34236 || || ||||| | ||| || ||||| ||||||||||||| || || || |||| Sbjct 18540414 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTG-CGCCCGTC 18540472 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 || | |||||| || ||||| ||||||||||||||||| ||| | || |||||||| Sbjct 18540473 CTCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 18540532 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | | | | || | |||| ||||| || || | ||||| || Sbjct 18540533 CTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCCACCTCGAGGGTGATTGT 18540592 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || |||||||| |||||||||||| Sbjct 18540593 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 18540626 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | || || ||||| ||||||||||| | Sbjct 33846297 CCACCACGGAGCCTGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCT 33846356 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | |||| || | |||||| || ||||| ||||||| |||||| || || Sbjct 33846357 AGAGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGA 33846416 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||| || ||||| | | | | || | |||| || || Sbjct 33846417 ATGCCTTCCTTGTCCTGAATC-TTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCAC 33846475 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| |||||||||||||| || || || |||||||||||| Sbjct 33846476 CTCAAGGGTGATCGTTTTGCCGGTGAGTGTCTTAACGAAGATCTGCATC 33846524 >seq6 Length=32494073 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || ||||| | || |||| ||| | || |||||||| ||||||||||| Sbjct 11637695 GAAACCACCACGCAGACGGAGGACCAAGTGAAGGGTTGACTCTTTCTGGATGTTGTAGTC 11637636 Query 34219 GGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGA 34277 | | | || || | || || | ||||||||| ||||| ||||| ||||||||||| Sbjct 11637635 TGCTAAGGTG-CGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCG 11637577 Query 34278 CGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATT 34337 || | || ||||| || ||||| ||| | | | || | |||| | Sbjct 11637576 GAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCAATAGTGTCGGAGCTCT 11637517 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || |||| ||||||||| |||||||| ||||| ||||||||||||||||| Sbjct 11637516 CCACCTCCAGCGTGATGGTCTTGCCGGTAAGAGTCTTCACAAAGATCTGCAT 11637465 Score = 102 bits (112), Expect = 5e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || |||| ||| | |||| ||| ||||| ||||||||||| | | Sbjct 7250918 CCACCACGGAGACGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCAGCC 7250977 Query 34223 -AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || || | || | | ||| ||||| ||||| ||||| ||||||||||| || Sbjct 7250978 AAGGTG-CGACCATCCTAAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 7251036 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||||||| || ||| ||||| | | | | || | |||| || | Sbjct 7251037 AATGCCCTCCTTGTCCTGAAT-TTTAGCTTTGACGTTGTCAATGGTGTCGGAGCTCTCTA 7251095 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | |||||||| ||||| |||||||| || |||||||||||||| Sbjct 7251096 CCTCTAGAGTGATGGTCTTGCCCGTGAGAGTCTTGACAAAGATCTGCAT 7251144 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||||||||| | || || | || || | ||||||||| ||||| Sbjct 7250726 TCTTTCTGAATGTTGTAGTCAGCTAGTGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAG 7250785 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 ||||| ||||||||||| || | || ||||||||| || ||| ||||| | | Sbjct 7250786 ATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAAT-TTTAGCTTTGACGTT 7250844 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| || || || | || || || || |||||||| || || || Sbjct 7250845 GTCAATGGTGTCGGAGCTCTCAACTTCTAGAGTAATCGTCTTTCCGGTGAGGGTCTTGAC 7250904 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 7250905 AAAGATCTGCAT 7250916 >seq4 Length=32756842 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || ||||| ||||||||||||| Sbjct 29446797 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCG 29446856 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || ||||| || || ||||||||||| || Sbjct 29446857 AGGGTGCGTCCGTCCTCGAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGGTGGG 29446916 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| |||||||| Sbjct 29446917 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACC 29446976 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | || || || || || ||||| |||||||| |||||||||||| Sbjct 29446977 TCGAGGGTTATTGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATC 29447024 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| ||||||||||| | || |||| | || || | ||| || || ||||| | Sbjct 27090905 CTTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 27090964 Query 34260 TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCG 34318 | | |||||||| || || | || |||||||| ||| || ||||| | || | Sbjct 27090965 TCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATC-TTGGCTTTGACATTG 27091023 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| || || || || | |||||||| |||||||| || |||||||| Sbjct 27091024 TCGATGGTGTCGGAGGACTCCACCTCGAGTGTGATGGTCTTGCCGGTTAGGGTTTTCACG 27091083 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 27091084 AAGATCTGCATC 27091095 >seq3 Length=44396707 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || ||||| ||||||||||||| Sbjct 26086600 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 26086659 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || ||||| || |||||||||||||| || Sbjct 26086660 AGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 26086719 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | || | | || | |||| || ||||| Sbjct 26086720 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACC 26086779 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || || ||||| |||||||||||| Sbjct 26086780 TCGAGGGTGATTGTCTTCCCCGTTAGGGTCTTCACGAAGATCTGCATC 26086827 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | |||| ||| ||||| |||||||| |||| | Sbjct 19894338 CCACCACGGAGCCTGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGCC 19894397 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | |||| |||| |||||| || ||||| || |||| ||||| || ||| Sbjct 19894398 AGGGTTCTGCCGTCTTCCAGCTGCTTCCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGA 19894457 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||| || ||||| |||||| | | | || | |||| ||| || Sbjct 19894458 ATGCCTTCCTTATCCTGAATCTTG-GCTTTAACGTTGTCGATGGTGTCGGAGTTTTCCAC 19894516 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || || |||||||| || || |||||||||||| Sbjct 19894517 CTCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTAACGAAGATCTGCATC 19894565 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | ||| ||| ||||| || ||||| || | Sbjct 21554713 CCACCACGAAGCCTGAGGACCAAGTGGAGAGTCGATTCCTTCTGGATATTGTAATCAGCA 21554772 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | | || ||||||||||| || ||||| || |||| |||||| || || Sbjct 21554773 AGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 21554832 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||| || ||||| |||||| | | | || | |||| ||| || Sbjct 21554833 ATGCCCTCCTTATCCTGGATCTTG-GCTTTAACGTTGTCGATGGTGTCGGAGCTTTCCAC 21554891 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || ||||||||||||||||| |||||||||||| Sbjct 21554892 CTCAAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATC 21554940 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | || || ||||| || ||||| || | Sbjct 19912386 CCACCACGGAGCCTGAGGACGAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCAGCG 19912445 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | |||| |||| |||||| || ||||| || |||| |||||| || ||| Sbjct 19912446 AGGGTTCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGA 19912505 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| |||||| | | | || | |||| ||| || Sbjct 19912506 ATGCCCTCCTTGTCCTGGATCTTG-GCTTTAACGTTGTCGATGGTGTCGGAGCTTTCCAC 19912564 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || ||||||||||| || || |||||||||||| Sbjct 19912565 CTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 19912613 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | ||| || ||||| || |||||||| | | Sbjct 21554029 CCACCACGAAGCCTGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCAGCC 21554088 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||||||||| ||||| ||||| ||||||||||| || Sbjct 21554089 AAGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 21554148 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || || Sbjct 21554149 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACT 21554208 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || || | || |||||||| |||||||| Sbjct 21554209 TCTAGAGTGATCGTCTTTCCTGTCAAGGTCTTCACAAAAATCTGCAT 21554255 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGT--ACTTTCTTTCTGTATGTTGTAGTCG 34219 ||| || | ||| | ||||||||||| | || |||| ||||| |||||||||||| Sbjct 23005713 TCCTCCTCTCAGACGGAGCACCAGGTGAAGCGTCGACTTC--TTCTGGATGTTGTAGTCG 23005770 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGAC 34278 | || | ||| | || |||||| | | ||| || || |||||||||| || Sbjct 23005771 GCGAGGGTCCTCCTGTCTTTCAGCTGCTTCTCGGTGAAGATCAGTCGCTGCTGGTCCGGT 23005830 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTC 34338 ||| | || |||||||| ||||| ||| | || | | |||| |||| ||||| Sbjct 23005831 GGGATCCCT-TCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTC 23005889 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| || | | || || || || || || ||||||||| |||||||||| Sbjct 23005890 GACCTCTAGGATTATCGTCTTTCCTGTTAGGGTTTTCACAGAGATCTGCAT 23005940 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || || | ||| |||| ||| | || || ||||| |||||||| || Sbjct 19893650 GAAACCACCACGGAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 19893709 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGAC 34278 | || || | || || | ||||||||||||||| || | || ||||||||| Sbjct 19893710 AGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGG 19893769 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATT 34337 || | | ||| ||||| ||||| ||||| | | | | || | |||| | Sbjct 19893770 AGGAATACCCTCTTTGTCCTGGATCTTG-GCTTTGACGTTGTCAATGGTGTCGGAGCTCT 19893828 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || || | |||||||| ||||| |||||||| ||||| ||||||||||| Sbjct 19893829 CAACTTCTAGAGTGATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCAT 19893880 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || |||||||| || ||||| ||||||||||| | Sbjct 21554485 CCACCACGGAGCCTGAGAACGAGATGTAAAGTTGACTCCTTCTGAATGTTGTAGTCAGCA 21554544 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | || ||||||||||| || || || || | || ||||||||| || Sbjct 21554545 AGAGTTCTTCCATCCTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGA 21554604 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---TTC 34338 | | ||||||||| ||| || |||||| | |||||| ||| || || Sbjct 21554605 ATACCCTCCTTGTCCTGGATC-TTAGCTTTA---ACGTTATCGATGGTGTCAGAACTCTC 21554660 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| ||||| || || ||||| ||||| || |||||||| ||||| Sbjct 21554661 CACCTCCAAAGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATTTGCAT 21554711 >seq5 Length=39062406 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || ||||| ||||||||||||| Sbjct 25970277 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCT 25970336 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || ||||| ||||| ||||||||||| || Sbjct 25970337 AGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGGTCCGGAGGG 25970396 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||| || ||||| | | | | || | |||| ||||| || Sbjct 25970397 ATGCCTTCCTTGTCCTGGATC-TTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCAAC 25970455 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || |||||||| |||||||||||| Sbjct 25970456 CTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 25970504 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | ||| ||| ||||| || ||||| || | Sbjct 24281197 CCACCACGAAGCCTGAGGACCAAGTGGAGAGTCGATTCCTTCTGGATATTGTAATCAGCA 24281138 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | | || ||||||||||| || ||||| || |||| |||||| || || Sbjct 24281137 AGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 24281078 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||| || ||| || ||||| | | | | || | |||| ||| || Sbjct 24281077 ATGCCCTCCTTATCCTGGATC-TTGGCTTTAACGTTGTCGATGGTGTCGGAGCTTTCCAC 24281019 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| |||||||| || |||||||| |||||||||||| Sbjct 24281018 CTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATCTGCATC 24280970 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| ||||| || || || || | ||| |||||||| ||||||||||||| | Sbjct 6898114 CCACCGCGGAGCCTGAGGACGAGATGAAGCGTAGACTCTTTCTGGATGTTGTAGTCGGCC 6898055 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | |||| || | |||||| || ||||| ||||||| |||||| ||| || Sbjct 6898054 AATGTTCTACCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGG 6897995 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||| || ||||| | | | | || | || | ||| || Sbjct 6897994 ATACCTTCCTTGTCCTGAATC-TTGGCTTTGACGTTGTCGATGGTGTCAGAGCTTTCCAC 6897936 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || || |||||||| || || ||||| |||||| Sbjct 6897935 CTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCATC 6897887 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 || ||||| ||||||||||||| | | || || | || || | ||||||||| ||||| Sbjct 6898534 TCCTTCTGGATGTTGTAGTCGGCTAAGGTG-CGACCATCCTCAAGCTGCTTGCCAGCGAA 6898476 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | | ||||||||| || | || |||||||| ||||| ||| | || Sbjct 6898475 GATCAATCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 6898416 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| || || |||| ||||||||| |||||||| || || || || Sbjct 6898415 ATCAATGGTGTCGGAGCTCTCCACCTCCAGCGTGATGGTCTTGCCGGTAAGCGTCTTGAC 6898356 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 6898355 AAAGATCTGCAT 6898344 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || ||| | || |||| |||||||||||| || Sbjct 24282073 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 24282014 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||||| |||||||||| ||| | || ||||| || ||||| ||| | | | Sbjct 24282013 ATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTG 24281954 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || | |||||||| ||||| || | || ||||| Sbjct 24281953 TCAATGGTGTCAGAGCTCTCAACTTCAAGTGTGATGGTCTTGCCAGTCAAGGTCTTCACG 24281894 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 24281893 AAAATCTGCAT 24281883 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | ||| || ||||| || |||||||| | | Sbjct 24281881 CCACCACGAAGCCTGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCAGCC 24281822 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||||||||| ||||| ||||| ||||||||||| || Sbjct 24281821 AAGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 24281762 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || || Sbjct 24281761 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACT 24281702 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || || | || |||||||| |||||||| Sbjct 24281701 TCTAGAGTGATCGTCTTTCCTGTCAAGGTCTTCACAAAAATCTGCAT 24281655 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || |||||||| || ||||| ||||||||||| | Sbjct 24281425 CCACCACGGAGCCTGAGAACGAGATGTAAAGTTGACTCCTTCTGAATGTTGTAGTCAGCA 24281366 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | || ||||||||||| || || || || | || ||||||||| || Sbjct 24281365 AGAGTTCTTCCATCCTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGA 24281306 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---TTC 34338 | | ||||||||| ||| || |||||| | |||||| ||| || || Sbjct 24281305 ATACCCTCCTTGTCCTGGATC-TTAGCTTTA---ACGTTATCGATGGTGTCAGAACTCTC 24281250 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| ||||| || || ||||| ||||| || |||||||| ||||| Sbjct 24281249 CACCTCCAAAGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATTTGCAT 24281199 >seq2 Length=44367670 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| | || |||||||| | || || ||||| ||||||||||||| Sbjct 7316048 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 7315989 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| | |||| |||| |||||| || ||||| || || |||||||| || || Sbjct 7315988 AAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGG 7315929 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| ||||| ||||| | || | | |||| || | ||||||| Sbjct 7315928 GATGCCTTCCTTGTCCTGGATCTTG-GCTTTGACATTGTCGATCGTGTCTGATGATTCGA 7315870 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | || || || || || || || |||||||||||||||||||| Sbjct 7315869 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 7315821 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | ||| || ||||| || |||||||| | | Sbjct 25764457 CCACCACGGAGCCTGAGAACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAGTCAGCC 25764516 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | | | || ||||| ||||| || ||||| || |||| |||||| || || Sbjct 25764517 AAGGTCCTGCCATCTTCCAATTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 25764576 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||| || ||||| |||||| | | | |||| || | ||| || Sbjct 25764577 ATGCCTTCCTTATCCTGGATCTTG-GCTTTAACGTTGTCGATCGTGTCAGAGCTTTCCAC 25764635 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || ||||||||||||||||| |||||||||||| Sbjct 25764636 CTCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATC 25764684 Score = 93.3 bits (102), Expect = 3e-14 Identities = 171/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 34148 CAGATTTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGT 34207 |||| ||| | ||| || || || || | || |||| ||| | || || ||||| Sbjct 25763531 CAGAGTTC-TAGAAGCCACCACGTAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGG 25763589 Query 34208 ATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCG 34266 ||||||||||| | || | || || | || || | ||||| || ||||| ||||| || Sbjct 25763590 ATGTTGTAGTCTGCCAAGGTG-CGACCATCCTCGAGTTGCTTTCCAGCGAAGATGAGACG 25763648 Query 34267 CTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAG-ATCGGCTATCG 34325 ||||||||| || | || |||||||| ||||| |||||| || | | || | Sbjct 25763649 CTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGGATCTTG-GCTTTAACATTGTCAATGG 25763707 Query 34326 AATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCT 34385 |||| || || |||| ||||| || |||||||||||||| ||||| ||||| | Sbjct 25763708 TGTCGGAGCTCTCAACCTCCAATGTGATAGTCTTGCCGGTGAGAGTCTTCACGAAGATTT 25763767 Query 34386 GCAT 34389 |||| Sbjct 25763768 GCAT 25763771 >seq8 Length=44809562 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||| ||||| | ||| ||| ||||| || ||||| || | Sbjct 30326657 CCACCACGTAGACGCAGCACAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAATCCGCA 30326598 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || || | ||| || || ||||| ||||| | ||||||||| || Sbjct 30326597 AGCGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGA 30326538 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| |||||| ||| | | | | |||| || | || || Sbjct 30326537 ATCCCTTCCTTGTCCTGAATCTTTGCCTTGACGTTGTCAATCGTGTCAGAGTTCTCCACC 30326478 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||||||||| ||||| || ||||| || |||||||| Sbjct 30326477 TCAAGAGTGATGGTTTTGCCTGTGAGGGTCTTCACGAAAATCTGCAT 30326431 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || ||||||||||| | || | | || || | |||||| || ||||| Sbjct 30325937 TCTTTTTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCTAGCTGCTTCCCGGCGAAG 30325878 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || |||| ||||||||| || | || |||||||| ||||| ||| | | | Sbjct 30325877 ATAAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 30325818 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| |||| |||||| || | |||||||| ||||| || | ||| || ||| Sbjct 30325817 TCAATCGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTGCCTGTCAAAGTCTTGACA 30325758 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 30325757 AAGATCTGCAT 30325747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323061979215200