Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7 120 3e-22 seq5 116 3e-21 seq8 109 5e-19 seq2 109 5e-19 seq6 102 7e-17 seq3 96.9 3e-15 seq4 91.5 1e-13 >seq7 Length=41685129 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || ||||| ||| | || || ||| | Sbjct 26880399 AAAAATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATAACCCTAGAGGTCGAATC 26880458 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || |||||||||||| | ||||| || Sbjct 26880459 ATCCGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCGCCAGA 26880518 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || ||||| || || ||| | |||||| | ||| || ||| || Sbjct 26880519 CCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTCGAAGACGGGAGGACGCTGGCCGACTA 26880578 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || ||||| ||||| ||||| || | ||||| || || Sbjct 26880579 CAACATCCAGAAGGAGTCGACGCTTCACCTGGTGCTACGCCTGAGAGGAGG 26880629 Score = 109 bits (120), Expect = 5e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 ||||||| ||||| || ||||| || || || || || || || |||||| |||| || | Sbjct 18540633 AATCAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTGG 18540574 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 || | ||||||| |||| | ||||| | || ||||||||||||| | || | Sbjct 18540573 AATCCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCC 18540514 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 | ||||||||||| || || ||||| || || ||| | || ||| || | || Sbjct 18540513 CGGACCAGCAGCGGCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGGCGCACCTTAGCCG 18540454 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | || ||||| || || || |||||||| || || || || | ||||| || || Sbjct 18540453 ACTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTGAGAGGAGG 18540399 Score = 109 bits (120), Expect = 5e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||||||||||||| | || || || ||| Sbjct 33846523 ATGCAGATCTTCGTTAAGACACTCACCGGCAAAACGATCACCCTTGAGGTGGAGAGCTCC 33846464 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || ||||||||||||| | || || || ||| Sbjct 33846463 GACACCATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAG 33846404 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 ||| | || || ||||| || || ||| | || ||| | ||| | ||| || || || Sbjct 33846403 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACTCT-AGCTGACTACAA 33846345 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| || || || ||||| |||||||| || || || || Sbjct 33846344 CATCCAGAAGGAGTCGACCCTTCATCTCGTCCTCAGGCT 33846306 >seq5 Length=39062406 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || || || || |||||| |||| || ||| || Sbjct 6897888 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 6897947 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || |||||||||||| | || ||||| ||| Sbjct 6897948 GACACCATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGTATCCCTCCCGATCAG 6898007 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| || || ||| | || ||| || || || ||| || ||| Sbjct 6898008 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGTAGAACATTGGCCGACTACAAC 6898067 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| || || |||||||| || || || || | || |||| Sbjct 6898068 ATCCAGAAAGAGTCTACGCTTCATCTCGTCCTCAGGCTCCGCGGTGGTA 6898116 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || || |||||| |||| |||||| | Sbjct 25970507 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTTGAATC 25970448 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | |||||| | || ||||||||||||| | || || || Sbjct 25970447 CTCCGACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGA 25970388 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || ||||| || || ||| | || ||| || | ||| || Sbjct 25970387 CCAGCAGCGACTCATCTTCGCCGGAAAGCAGCTCGAGGACGGACGCACCCTAGCCGACTA 25970328 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || |||||||| || || || || Sbjct 25970327 CAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCT 25970292 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || |||||| | || || ||| ||| Sbjct 24280971 ATGCAGATCTTCGTGAAAACCCTTACCGGCAAGACCATCACCCTTGAGGTGGAAAGCTCC 24281030 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | || | ||| | ||| ||||| ||| | || || || || Sbjct 24281031 GACACCATCGACAACGTTAAAGCCAAGA-TCCAGGATAAGGAGGGCATTCCTCCGGATCA 24281089 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || || ||||||||||| | ||| | ||||| || Sbjct 24281090 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGATGGCAGGACCCTTGCTGATTACAA 24281149 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||||||||| || |||| || || || | || |||| Sbjct 24281150 TATCCAGAAGGAATCGACTCTCCACTTGGTCCTCAGGCTTCGTGGTGGTA 24281199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| ||||||| || |||||||| | || || || || Sbjct 24281654 CATGCAGATTTTTGTGAAGACCTTGACAGGAAAGACGATCACTCTAGAAGTGGAGAGCTC 24281713 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || | || |||||||||||| | || || ||||| Sbjct 24281714 CGACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCA 24281773 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||||||||| ||| | || || | || || || || || Sbjct 24281774 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAA 24281833 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||||||||| |||| || || || | || |||| Sbjct 24281834 TATCCAGAAGGAGTCGACTCTTCACTTGGTGCTCAGGCTTCGTGGTGGTA 24281883 >seq8 Length=44809562 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||| |||||||||| || || ||| | || ||||| || Sbjct 30326659 ATGCAAATCTTTGTCAAGACTTTGACAGGCAAGACTATAACCTTGGAAGTTGAGAGCTCA 30326718 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||||||| | || || ||||| Sbjct 30326719 GACACAATCGACAATGTGAAGGCTAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAA 30326778 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| |||||| | || || || |||| || ||||| ||| Sbjct 30326779 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTAGGACTTTGGCTGATTACAAC 30326838 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || ||||||||||| |||| ||| Sbjct 30326839 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTT 30326871 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||||||||| || |||||| |||| || ||| ||| Sbjct 30325747 ATGCAGATCTTTGTCAAGACTTTGACAGGCAAGACCATCACCCTCGAGGTCGAAAGCTCC 30325806 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||||||| | || || |||||| Sbjct 30325807 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 30325866 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| || || ||| | || || | |||| | || || ||| Sbjct 30325867 CAGAGGCTTATCTTCGCCGGGAAGCAGCTAGAGGATGGAAGGACTCTTGCTGACTACAAC 30325926 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||| ||||| || || || || ||| | || | || |||| Sbjct 30325927 ATCCAAAAAGAGTCGACACTCCACCTTGTCCTTCGTCTTCGTGGTGGTA 30325975 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||||| || ||||| || ||||| |||| || || ||| Sbjct 30325519 ATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCC 30325578 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| || || || | || || |||||| Sbjct 30325579 GACACCATCGATAACGTCAAGGCTAAGATCCAGGATAAAGAGGGAATCCCACCGGACCAG 30325638 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || || || ||| | || || | |||| | || || ||| Sbjct 30325639 CAGAGGCTCATCTTTGCCGGTAAGCAGCTCGAGGATGGAAGGACTCTTGCTGACTACAAC 30325698 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || |||||||| ||||| || || || |||| || |||| Sbjct 30325699 ATCCAAAAGGAGTCGACTCTCCATCTCGTTCTCAGGTTGAGAGGTGGTA 30325747 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || ||||||||||| ||||| | || || || || Sbjct 30326431 ATGCAGATTTTCGTGAAGACCCTCACAGGCAAAACCATCACTCTTGAGGTGGAGAACTCT 30326490 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| || ||| | |||||||||||| | || || ||||| Sbjct 30326491 GACACGATTGACAACGTCAAGGCAAAGATTCA-GGACAAGGAAGGGATTCCTCCGGACCA 30326549 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || |||||||| |||||| | || || | || | ||||| || Sbjct 30326550 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACGCTTGCGGATTACAA 30326609 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| || ||||| || || || Sbjct 30326610 TATTCAGAAGGAATCTACCCTTCACCTTGTGCT 30326642 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| || || || ||||| ||||| | || ||||| || Sbjct 30326203 ATGCAGATTTTTGTCAAGACCCTCACCGGTAAAACCATCACTTTGGAGGTTGAGAGCTCA 30326262 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | |||||||||||| | || || ||||| Sbjct 30326263 GACACCATCGATAATGTCAAGGCAAAGATTCA-GGACAAGGAAGGGATCCCACCAGACCA 30326321 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||| | || || || ||||| || ||| | ||||| | | | ||| | ||||| | Sbjct 30326322 GCAAAGACTCATCTTTGCTGGAAAGCAGCTCGAAGA-TGGACGCACTCTTGCGGATTACA 30326380 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||| || || || || ||||| || ||| | || | || |||| Sbjct 30326381 ACATTCAAAAGGAGTCCACGCTCCATCTTGTGCTTCGTCTCCGTGGTGGTA 30326431 >seq2 Length=44367670 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || || || || || || || ||||| ||| | || || ||| | Sbjct 7315818 AAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATCA 7315877 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | |||||| | || ||||||||||||| | || || || Sbjct 7315878 TCAGACACGATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCGGAT 7315937 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| || || ||| |||||||| | ||| | ||| || Sbjct 7315938 CAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGAAGACGGGAGGACGCTTGCCGACTAC 7315997 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || ||||| ||||| ||||| || | ||||| || || Sbjct 7315998 AACATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCCGTCTGAGAGGAGG 7316047 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| |||||||| || ||||| || ||||| | || ||||| || Sbjct 25763772 CATGCAAATCTTCGTGAAGACTCTCACCGGCAAGACTATCACATTGGAGGTTGAGAGCTC 25763713 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || ||| | || |||||||||||| | || || ||||| Sbjct 25763712 CGACACCATTGACAATGTTAAAGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCA 25763653 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || || | || || | || || || || || Sbjct 25763652 GCAGCGTCTCATCTTCGCTGGAAAGCAACTCGAGGATGGTCGCACCTTGGCAGACTACAA 25763593 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || ||||| ||||| |||| || Sbjct 25763592 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 25763560 >seq6 Length=32494073 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || || || ||||| || | || ||||| ||| Sbjct 7250916 ATGCAGATCTTTGTCAAGACCCTCACCGGAAAGACGATTACTCTAGAAGTTGAGAGCTCC 7250857 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| ||||||||| ||| | || || |||||| Sbjct 7250856 GACACCATTGACAACGTCAAAGCTAAAATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 7250797 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 |||||||| || ||||||||||| ||| | || || | || | ||| || || || Sbjct 7250796 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCAC-ACTAGCTGACTACAA 7250738 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| ||||| ||||| ||||| |||| Sbjct 7250737 CATTCAGAAAGAGTCGACGCTTCACTTGGT 7250708 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || ||||| | || || || ||| Sbjct 7251144 ATGCAGATCTTTGTCAAGACTCTCACGGGCAAGACCATCACTCTAGAGGTAGAGAGCTCC 7251085 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| ||||||||| ||| | || || |||||| Sbjct 7251084 GACACCATTGACAACGTCAAAGCTAAAATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 7251025 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||||||| | | || | || || || || ||| Sbjct 7251024 CAGCGTCTCATCTTCGCTGGCAAACAGCTTTAGGATGGTCGCACCTTGGCTGACTACAAC 7250965 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || ||||| ||||| || |||| Sbjct 7250964 ATCCAGAAGGAATCTACTCTCCACTTGGT 7250936 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || || ||| | || || || ||| Sbjct 11637237 ATGCAGATCTTCGTCAAGACACTCACTGGGAAGACTATAACCCTAGAGGTGGAGAGCTCC 11637296 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || ||| ||||||||| | || || || ||| Sbjct 11637297 GACACCATTGATAACGTCAAAGCTAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAG 11637356 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 || ||||| || ||||||||||| ||| | |||||| | || | ||| || || || Sbjct 11637357 CAACGTCTCATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCAC-CTTAGCTGACTACAA 11637415 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||||||| || || |||||||| |||| Sbjct 11637416 CATTCAAAAGGAGTCCACTCTTCACTTGGT 11637445 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||||| || ||||| || ||||| | || || || || Sbjct 11637464 CATGCAGATCTTTGTGAAGACTCTTACCGGCAAGACCATCACGCTGGAGGTGGAGAGCTC 11637523 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | ||||| | || ||| ||||||||| | || || ||||| Sbjct 11637524 CGACACTATTGATAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCGGACCA 11637583 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 ||||||||| || ||||||||||| ||| | || || | || | ||| || || | Sbjct 11637584 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCAC-CTTAGCAGACTACA 11637642 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||| || ||||| || || ||||| |||| || | ||| | || ||| Sbjct 11637643 ACATCCAGAAAGAGTCAACCCTTCACTTGGTCCTCCGTCTGCGTGGTGGT 11637692 >seq3 Length=44396707 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||||| || || || || |||||| | || || ||| ||| Sbjct 21554939 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCC 21554880 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | || | ||| | ||| ||||| ||| | || || || || Sbjct 21554879 GACACCATCGACAACGTTAAAGCCAAGA-TCCAGGATAAGGAGGGCATTCCTCCGGATCA 21554821 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || || ||||||||||| | ||| | ||||| || Sbjct 21554820 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGATGGCAGGACCCTTGCTGATTACAA 21554761 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||||||||| || |||| || || || | || |||| Sbjct 21554760 TATCCAGAAGGAATCGACTCTCCACTTGGTCCTCAGGCTTCGTGGTGGTA 21554711 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| ||||||| || |||||||| | || || || || Sbjct 21554256 CATGCAGATTTTTGTGAAGACCTTGACAGGAAAGACGATCACTCTAGAAGTGGAGAGCTC 21554197 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || | || |||||||||||| | || || ||||| Sbjct 21554196 CGACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCA 21554137 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||||||||| ||| | || || | || || || || || Sbjct 21554136 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAA 21554077 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||||||||| |||| || || || | || |||| Sbjct 21554076 TATCCAGAAGGAGTCGACTCTTCACTTGGTGCTCAGGCTTCGTGGTGGTA 21554027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || |||||| |||| || || | ||| Sbjct 26086826 ATGCAGATCTTCGTGAAGACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGTCCTCC 26086767 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||||||| | || || |||||| Sbjct 26086766 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 26086707 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || ||| | || ||| || | ||| || ||| Sbjct 26086706 CAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTACAAC 26086647 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || |||||||| || || || || Sbjct 26086646 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCT 26086615 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| ||||| || || || ||||| | || || || || Sbjct 19894108 ATGCAGATTTTCGTTAAGACACTGACCGGGAAGACCATCACTCTGGAGGTGGAGAGTTCA 19894049 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | ||||| || ||| | |||||||||||| | || || ||||| Sbjct 19894048 GACACTATAGACAATGTCAAGGCAAAGA-TCCAAGACAAGGAAGGCATTCCTCCAGACCA 19893990 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || || || || ||| | || ||| | || || ||||| || Sbjct 19893989 GCAGAGACTCATCTTTGCCGGAAAGCAGCTAGAGGACGGCAGAACACTGGCTGATTACAA 19893930 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| ||||| || || ||||| |||| Sbjct 19893929 CATTCAGAAAGAGTCTACGCTTCACTTGGT 19893900 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || | || || || || ||||| || ||||| | | | || || ||| | Sbjct 23005944 AAAAATGCAGATCTCTGTGAAAACCCTAACAGGAAAGACGATAATCCTAGAGGTCGAATC 23005885 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || |||||||||||| | || || || Sbjct 23005884 ATCCGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGA 23005825 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || ||| | | || ||| || ||||| | ||| | ||| || Sbjct 23005824 CCAGCAGCGACTGATCTTCACCGAGAAGCAGCTGAAAGACAGGAGGACCCTCGCCGACTA 23005765 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || | ||||| ||||| ||||| || | ||||| || || Sbjct 23005764 CAACATCCAGAAGAAGTCGACGCTTCACCTGGTGCTCCGTCTGAGAGGAGG 23005714 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| || || || || || ||||| | || || || || Sbjct 19911929 CATGCAGATCTTTGTTAAGACACTTACCGGGAAGACCATCACTCTAGAGGTGGAGAGCTC 19911870 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | || || | ||| || ||||| || | || || ||||| Sbjct 19911869 CGACACTATTGACAACGTGAAGGCCAAAATCCAAGATAAGGAGGGGATCCCACCGGACCA 19911810 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || ||||||||||||||| | || || | || || ||||| || Sbjct 19911809 GCAACGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGTCGCACCTTGGCAGATTACAA 19911750 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| || || || ||||||||| |||| Sbjct 19911749 CATTCAGAAGGAGTCAACTCTTCATTTGGT 19911720 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||| ||||| || ||||| | || ||||| || Sbjct 21554027 ATGCAGATTTTCGTGAAGACCTTGACTGGCAAGACCATCACACTTGAAGTTGAGAGCTCT 21553968 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||||||||||||| | || || |||||| Sbjct 21553967 GACACCATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 21553908 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 |||||||| || |||||||| || ||| | || || | || | ||| || || || Sbjct 21553907 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCAC-CTTAGCAGACTACAA 21553849 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || ||||| |||| || Sbjct 21553848 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCT 21553816 >seq4 Length=32756842 Score = 91.5 bits (100), Expect = 1e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || ||||| || ||||| |||| || || Sbjct 27091099 CAAAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACACTCGAGGTGGAGT 27091040 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | |||||| | || |||||||||||| | || || | Sbjct 27091039 CCTCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGG 27090980 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 | ||||||||| | || ||||| || |||||| | ||||| Sbjct 27090979 ATCAGCAGCGTTTGATCTTCGCCGGTAAACAGCTCGAAGA 27090940 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || || || ||| |||| || ||| Sbjct 29447028 CAAAGATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACAATAACCCTCGAGGTCGAAT 29446969 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || |||||||||||| | || || | Sbjct 29446968 CCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTG 29446909 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||||||| || ||||| || || ||| | || ||| Sbjct 29446908 ACCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGAC 29446868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445752219056400