Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq6 129 6e-25 seq3 123 2e-23 seq4 113 4e-20 seq2 105 7e-18 seq5 104 2e-17 seq7 98.7 1e-15 seq8 95.1 1e-14 >seq6 Length=32494073 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GC 139595 ||| || || | |||||| || ||||||| || ||||| ||||||||||| || || || Sbjct 11637464 GCCTCCACGCAGACGCAACACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC 11637405 Query 139596 TCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | | |||| |||||| ||||| || ||||| |||| |||||||||||||| |||| Sbjct 11637404 TAAG-GTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAG 11637346 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | |||||||| || || ||| || ||| | | || | ||||||| | ||||| Sbjct 11637345 GAATGCCTTCCTTATCCTGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTCTCCA 11637286 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| | ||| | ||||| || || | || || ||||| || |||||| Sbjct 11637285 CCTCTAGGGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCATA 11637236 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || ||||||||||| || ||||||| ||||||||| ||||| ||||| || || Sbjct 7251374 CCTCCACGTAAACGCAAGACCAAGTGAAGCGTAGACTCCTTTTGGATGTTGTAGTCAGCG 7251433 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | | ||||| || || || || ||| |||||| | ||||| || || || Sbjct 7251434 AGAGTACGCCCATCTTCAAGTTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGG 7251493 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| | || | |||| | | || | ||||||| | ||||| Sbjct 7251494 ATTCCCTCCTTGTC-CTGAATCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTTCCAC 7251552 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||| ||||| | || || ||||| || ||||| Sbjct 7251553 CTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 7251600 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || || || | ||| | || ||||||| || |||||||| || ||||| || || ||| Sbjct 11637691 CCACCACGCAGACGGAGGACCAAGTGAAGGGTTGACTCTTTCTGGATGTTGTAGTCTGCT 11637632 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || |||||||| || ||||| |||| ||||| ||||| || ||||| Sbjct 11637631 AAG-GTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 11637573 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| || || ||| || || | | || | ||||||| | |||||| Sbjct 11637572 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCAATAGTGTCGGAGCTCTCCAC 11637513 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | ||||||||||| | || || || || || ||||| Sbjct 11637512 CTCCAGCGTGATGGTCTTGCCGGTAAGAGTCTTCACAAAGATCTGCAT 11637465 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||||| ||| ||||| ||||| ||||| || ||| | Sbjct 11637235 CCACCACGCAGACGTAGCACCAAGTGAAGCGTCGACTCCTTTTGGATGTTGTAGTCGGCC 11637176 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||||||||| || || ||| |||||| | ||||| || || || Sbjct 11637175 AAGGTACGACCGTCTTCGAGCTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGTGGG 11637116 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || ||| | | || | ||||| | | || ||| Sbjct 11637115 ATACCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCAGAGCTTTCAACC 11637056 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||| ||||| | || || ||||| || ||||| Sbjct 11637055 TCGAGGGTGATGGTCTTTCCGGTAAGTGTCTTCACGAAGATCTGCAT 11637009 >seq3 Length=44396707 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || ||||||| |||||||||||| |||||||| ||||| | Sbjct 19893882 CCACCACGGAGACGCAAGACCAAGTGAAGCGTAGACTCTTTCTGAATGTTGTAATCAGCC 19893941 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||| || ||||| || || ||| |||| || | ||||| || ||||| Sbjct 19893942 AGTGTTCTGCCGTCCTCTAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCTGGAGGA 19894001 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| ||| || | | || | ||||| | ||||||| Sbjct 19894002 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCTATAGTGTCTGAACTCTCCACC 19894061 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| ||||||| || || ||||| || |||||| Sbjct 19894062 TCCAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACGAAAATCTGCATA 19894109 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| || || || |||| || ||||| || |||||||| ||||| Sbjct 19911701 GCCTCCACGCAGACGTAACACCAAATGAAGAGTTGACTCCTTCTGAATGTTGTAATCTGC 19911760 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| || ||||||||||| ||||| |||| ||||||||||| || || || Sbjct 19911761 CAAGGTGCGACCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCCGGTGG 19911820 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || || || |||||| || | | || | ||||||| | |||||| Sbjct 19911821 GATCCCCTCCTTATCTTGGATTTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCAC 19911880 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | ||||| ||||| | || || || || || ||||| Sbjct 19911881 CTCTAGAGTGATGGTCTTCCCGGTAAGTGTCTTAACAAAGATCTGCAT 19911928 >seq4 Length=32756842 Score = 113 bits (124), Expect = 4e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||||||||||||||| || |||||| ||| |||||||| ||||| |||||||| ||| Sbjct 27090940 TCTTCGAGCTGTTTACCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTG 27090999 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || ||| | | || | ||||||| || ||||||||| | || | Sbjct 27091000 TCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCGAGTGTGATG 27091059 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||| | ||||| ||||| || ||||| Sbjct 27091060 GTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 27091094 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||||||||||| || ||||| |||||| | || | |||||||||||| Sbjct 5791408 TGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCTTCGAGCTGC 5791467 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 ||||| || ||||||| | |||||| || || ||||||||||||||||| Sbjct 5791468 TTACCGGCGAAGATCAGCCTTTGCTGGTCTGGTGGTATGCCTTCTTTGTC 5791517 >seq2 Length=44367670 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| ||| | || ||||||| || ||||| || || ||||| || || Sbjct 25763544 GCCACCACGTAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGC 25763603 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| || ||||| || || ||||| |||| ||||| ||||| || ||||| Sbjct 25763604 CAAGGTGCGACCATCCTCGAGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 25763663 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| || ||| | | || | ||||||| | ||| || Sbjct 25763664 GATGCCTTCCTTGTCTTGGATCTTGGCTTTAACATTGTCAATGGTGTCGGAGCTCTCAAC 25763723 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | ||||||||||| | || || ||||| |||||||| Sbjct 25763724 CTCCAATGTGATAGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 25763771 >seq5 Length=39062406 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| |||||||||||| || ||||| || ||| || ||| || ||| |||||||| Sbjct 6898090 TGAAGCGTAGACTCTTTCTGGATGTTGTAGTCGGCCAATGTTCTACCGTCCTCGAGCTGC 6898031 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || |||| || | |||||||||||||| || ||||| ||||| ||| | || Sbjct 6898030 TTTCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTC-CTGAATCTT 6897972 Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | ||| | | || | ||||| | | |||||||| | ||| | ||||| || || Sbjct 6897971 GGCTTTGACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCCGT 6897912 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | || || ||||| |||||||| Sbjct 6897911 GAGAGTCTTAACGAAGATTTGCAT 6897888 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||||| || ||||| || || ||||| || ||| Sbjct 6898570 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 6898511 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| |||||| | ||||| || ||||| Sbjct 6898510 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCCGGAGGG 6898451 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || | | || | ||||||| | ||||||| Sbjct 6898450 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTCTCCACC 6898391 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||||||||| | ||| || || || || ||||| Sbjct 6898390 TCCAGCGTGATGGTCTTGCCGGTAAGCGTCTTGACAAAGATCTGCAT 6898344 >seq7 Length=41685129 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| ||| ||||| || || ||||| || ||| || || ||| |||||||||||| Sbjct 26880606 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCTCCCGTCTTCGAGCTG 26880547 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || || || ||||||| || ||||| || || || || ||||| ||||| ||| || Sbjct 26880546 CTTCCCGGCGAAGATCAGTCGCTGCTGGTCTGGCGGGATCCCTTCCTTGTCCTGGATCTT 26880487 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | ||||||| | || ||||| | ||| | |||||| || || Sbjct 26880486 GGCCTTGACATTGTCGATCGTGTCGGATGATTCGACCTCTAGGGTTATCGTCTTCCCCGT 26880427 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 26880426 AAGGGTTTTCACGAAGATCTGCAT 26880403 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATC-GCTCATTGTGCTCGAGTCTTCGAGCTG 139620 |||| || ||||| || || ||||| || || ||| | || || ||| |||||||| Sbjct 33846321 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCT-AGAGTTCTGCCGTCCTCGAGCTG 33846379 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || || || |||| || | |||||||| ||||| |||||||| ||||| ||| | | Sbjct 33846380 CTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCC-TGAATCT 33846438 Query 139681 TTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739 | | ||| | | || | ||||||| | ||||||||||| ||| | ||| ||||||| Sbjct 33846439 TGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATCGTTTTGCCGG 33846498 Query 139740 TCAACGTTTTTACGAATATTTGCAT 139764 | | || || ||||| || ||||| Sbjct 33846499 TGAGTGTCTTAACGAAGATCTGCAT 33846523 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GC 139595 ||| || || | |||||| || | || | || ||||| || || ||||| || || || Sbjct 33846068 GCCTCCACGCAGACGCAACACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAGC 33846127 Query 139596 TCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | | || || || |||||||| || || || |||||| | |||||||| || | Sbjct 33846128 T-AGAGTTCTACCATCCTCGAGCTGCTTCCCGGCGAAGATCAACCTCTGCTGATCAGGTG 33846186 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | || || || ||||| || || || | | || | ||||||| | ||||| Sbjct 33846187 GGATTCCCTCCTTGTCTTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCA 33846246 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | |||||| ||||||||||| || || || || ||||| Sbjct 33846247 CCTCTAGGGTGATCGTCTTTCCGGTCAACGTCTTGACAAAGATCTGCAT 33846295 >seq8 Length=44809562 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| ||||||| || ||||| || || ||||| ||||| | Sbjct 30326885 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 30326826 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || |||||||||||||| |||| || | || || || ||||| Sbjct 30326825 AAAGTCCTACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 30326766 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | || | | || | |||||| | | ||| || Sbjct 30326765 ATCCCTTCCTTGTC-CTGAATCTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAAC 30326707 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | |||||||| ||||| || || || || ||||||||| Sbjct 30326706 TTCCAAGGTTATAGTCTTGCCTGTCAAAGTCTTGACAAAGATTTGCATA 30326658 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||| ||||| || | ||||| ||||| || || ||||| || ||||| Sbjct 30326657 CCACCACGTAGACGCAGCACAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAATCCGCA 30326598 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || |||||||| ||||| |||| || | ||||| || ||||| Sbjct 30326597 AGCGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGA 30326538 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | |||| || | | || | ||||| | | |||||| Sbjct 30326537 ATCCCTTCCTTGTCC-TGAATCTTTGCCTTGACGTTGTCAATCGTGTCAGAGTTCTCCAC 30326479 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || | || ||||| || | || || ||||| || |||||| Sbjct 30326478 CTCAAGAGTGATGGTTTTGCCTGTGAGGGTCTTCACGAAAATCTGCATA 30326430 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 139567 CGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTAC 139625 ||| ||||| ||||||||||| ||||| | |||| || | ||||||||||| || | Sbjct 30326400 CGTGGACTCCTTTTGAATGTTGTAATCCGCAAGAGTGCGTCCA-TCTTCGAGCTGCTTTC 30326342 Query 139626 CAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-T 139684 ||||| |||| || | |||||| || || || || ||||| ||||| ||| | |||| Sbjct 30326341 CAGCAAAGATGAGTCTTTGCTGGTCTGGTGGGATCCCTTCCTTGTC-CTGAATCTTTGCC 30326283 Query 139685 TTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAAC 139744 || | | || | ||||| | | ||| ||||| | || | || || ||||| | Sbjct 30326282 TTGACATTATCGATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTTTTACCGGTGAGG 30326223 Query 139745 GTTTTTACGAATATTTGCATA 139765 || || || || || |||||| Sbjct 30326222 GTCTTGACAAAAATCTGCATA 30326202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496048218964000