Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq7 158 3e-33 seq3 158 3e-33 seq5 143 6e-29 seq2 132 1e-25 seq8 131 4e-25 seq6 125 2e-23 seq2161 96.9 8e-15 >seq7 Length=41685129 Score = 158 bits (174), Expect = 3e-33 Identities = 168/219 (77%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | || || || ||||| || || ||||||| ||||||||| Sbjct 33846306 AGCCTGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTTCTG 33846365 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| || || || |||||||| ||||||||||| || ||||| Sbjct 33846366 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCC 33846425 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||||||||| ||||| || || || | ||| ||| || | || ||||| || || Sbjct 33846426 TTGTCCTGAATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCAAGGGT 33846484 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || ||||| || || || |||||||| Sbjct 33846485 GATCGTTTTGCCGGTGAGTGTCTTAACGAAGATCTGCAT 33846523 Score = 129 bits (142), Expect = 1e-24 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| || | || || || || | || || || ||||| || || ||||| | Sbjct 26880630 TCCTCCTCTCAGGCGTAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 26880571 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || || |||||||| || || || || || || || || | ||| || || || || Sbjct 26880570 CAGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCTGGCGG 26880511 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| || ||||| ||||| || || ||||| || | || ||| | ||| || Sbjct 26880510 GATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 26880451 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTG 104565 |||||| || || ||||| || ||||| ||||| || || ||||||||||| || Sbjct 26880450 CTCTAGGGTTATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCATTTTTTG 26880397 Score = 129 bits (142), Expect = 1e-24 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || ||||| || || ||||||| |||||||||||| || || Sbjct 33846087 ACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTTCTACCATCCTCG 33846146 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || || || || || | |||||| |||||||| || ||||| || || || || Sbjct 33846147 AGCTGCTTCCCGGCGAAGATCAACCTCTGCTGATCAGGTGGGATTCCCTCCTTGTCTTGT 33846206 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTT 104529 ||||| || || || || || | ||| ||| || | || |||||||| || || ||||| Sbjct 33846207 ATCTTAGCCTTGACGTTATCGATGGTGTCG-GAGCTCTCCACCTCTAGGGTGATCGTCTT 33846265 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | || || ||||| |||||||| Sbjct 33846266 TCCGGTCAACGTCTTGACAAAGATCTGCAT 33846295 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | |||||| || || || |||||| Sbjct 33845871 GTTGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGACCGTCCTCGAGCTGCTTTCCA 33845930 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || ||||| || || || ||||| || || Sbjct 33845931 GCGAAGATAAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTG 33845990 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | || | || ||||| ||||| || ||||||||||| | || Sbjct 33845991 ACGTTATCAATCGTGTC-CGAGCTCTCCACCTCCAGTGTGATCGTCTTACCAGTCAACGT 33846049 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 33846050 CTTCACGAAGATCTGCAT 33846067 >seq3 Length=44396707 Score = 158 bits (174), Expect = 3e-33 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCC-TAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTC 104388 || ||||| | ||| | |||| | || || | ||||||||| || ||||| || ||||| Sbjct 19894107 ATACCCCCACGTAGACGTAAGACCAAG-TGAAGTGTAGATTCCTTTTGAATGTTGTAGTC 19894165 Query 104389 AGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGG 104448 || ||||| | || ||||| ||||| ||||||||||| || | |||||| || ||||| Sbjct 19894166 AGCAAGAGTACGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGG 19894225 Query 104449 AGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508 ||| || || || |||||||||||||| ||||| ||||| || | |||||| | || Sbjct 19894226 AGGAATACCCTCCTTATCCTGAATCTTGGCTTTAACATTGTCGATGGTATCTGAACTCTC 19894285 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||| || || ||||| | || || ||||| |||||||| Sbjct 19894286 CACCTCCAAAGTAATGGTTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 19894336 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| || || || || || || || || ||||||| |||||||| Sbjct 19912167 AGCCTGAGGACAAGATGCAAAGTCGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTTCTG 19912226 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| ||||| || || || |||||||| ||||| || || ||||| || Sbjct 19912227 CCATCTTCAAGTTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGTGGGATTCCCTCC 19912286 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 ||||| |||||||| || || || || || | ||| || | || || || || || Sbjct 19912287 TTATCTTGAATCTTAGCCTTCACGTTATCAATGGTGTCAGAACTCTCCACTTCAAGGGTG 19912346 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || | ||| || || ||||||||||| Sbjct 19912347 ATCGTCTTTCCGGTCAATGTCTTGACGAATATCTGCAT 19912384 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| ||||||||||| || || |||| || ||||| ||||| ||||| || ||||| Sbjct 19893912 GTAGACTCTTTCTGAATGTTGTAATCAGCCAGTGTTCTGCCGTCCTCTAGCTGCTTTCCG 19893971 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || ||||| || || ||||| || ||||| || || || |||||||| || Sbjct 19893972 GCAAAGATGAGTCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCTTGGATCTTTGCCTTG 19894031 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| |||| || || | || ||||| || || || ||||| || || ||||| Sbjct 19894032 ACATTGTCTATAGTGTCTGAACTCTCCACCTCCAGAGTGATGGTCTTCCCGGTCAGTGTC 19894091 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 19894092 TTAACGAAAATCTGCAT 19894108 Score = 138 bits (152), Expect = 3e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| || ||||||| |||||||| || || || || || || || Sbjct 19911960 GTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCGAGCTGCTTGCCG 19912019 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || || ||||| || || ||||| || || ||||||||||| Sbjct 19912020 GCAAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTGGATCTTTGCTTTG 19912079 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||| ||| || | || ||||| | ||||||||||| || || | || Sbjct 19912080 ACATTGTCAATGGTGTCG-GAGCTCTCCACCTCCAAAGTAATAGTCTTTCCCGTCAACGT 19912138 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 19912139 CTTGACAAAGATCTGCAT 19912156 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | |||||||| ||||| || || || || | || ||||| Sbjct 19894347 AGCCTGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGCCAGGGTTCTG 19894406 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| || || || || || || || ||||| || ||||| || || || ||||| Sbjct 19894407 CCGTCTTCCAGCTGCTTCCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGAATGCCTTCC 19894466 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||||||||| ||||| || || || | ||| ||| ||| ||||| || || Sbjct 19894467 TTATCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCGGAGTTTTCCACCTCGAGGGTG 19894526 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || || || |||||||| Sbjct 19894527 ATGGTCTTTCCTGTGAGAGTCTTAACGAAGATCTGCAT 19894564 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||||| || || | ||| || || || || |||||| Sbjct 19911504 GTTGACTCCTTCTGGATGTTGTAGTCAGCTAAGGTGCGACCATCCTCAAGCTGCTTTCCA 19911563 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || ||||| || || || ||||| || || Sbjct 19911564 GCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTC 19911623 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || | || | || ||||| ||||| || ||||||||||| | || Sbjct 19911624 ACGTTATCAATGGTGTC-CGAGCTCTCCACCTCCAGTGTGATGGTCTTACCAGTCAAGGT 19911682 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 19911683 CTTCACGAAGATTTGCAT 19911700 Score = 104 bits (114), Expect = 5e-17 Identities = 168/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 104324 TTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 || ||| |||| ||||| || | || || || || | || || | ||||| || || Sbjct 23005705 TTCTTTGTTCCTCCTCTCAGACGGAGCACCAGGTGAAGCGTCGACTTCTTCTGGATGTTG 23005764 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 ||||| | || || || | ||||| || || || | | || || || | ||| || Sbjct 23005765 TAGTCGGCGAGGGTCCTCCTGTCTTTCAGCTGCTTCTCGGTGAAGATCAGTCGCTGCTGG 23005824 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 || || || || ||||| || ||||| ||||| || || ||||| || | || ||| Sbjct 23005825 TCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCGGAT 23005884 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 | ||| |||||||| | || ||||| || || || ||||| ||| | ||||||||||| Sbjct 23005885 GATTCGACCTCTAGGATTATCGTCTTTCCTGTTAGGGTTTTCACAGAGATCTGCATTTTT 23005944 Query 104564 TG 104565 || Sbjct 23005945 TG 23005946 >seq5 Length=39062406 Score = 143 bits (158), Expect = 6e-29 Identities = 165/221 (75%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | ||||| |||||||| || || ||||| | | |||||| Sbjct 6898105 AGCCTGAGGACGAGATGAAGCGTAGACTCTTTCTGGATGTTGTAGTCGGCCAATGTTCTA 6898046 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| || || || |||||||| ||||| ||||| || ||||| Sbjct 6898045 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCC 6897986 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||||||||| ||||| || || || | ||| || ||| ||| ||||| || Sbjct 6897985 TTGTCCTGAATCTTGGCTTTGACGTTGTCGATGGTGTCAGAGCT---TTCCACCTCGAGG 6897929 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || || || || || ||||| Sbjct 6897928 GTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 6897888 >seq2 Length=44367670 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| || | || || || || | || || || ||||| || || ||||| | Sbjct 7316048 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 7315989 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || || |||||||| || || || || || || || || | ||| ||||| || || Sbjct 7315988 AAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGG 7315929 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| || ||||| ||||| ||||| ||||| || | || || | ||| || Sbjct 7315928 GATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATCGTGTCTGATGATTCGAC 7315869 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||||| || || ||||| || || || ||||| ||||| ||||||||||| Sbjct 7315868 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 7315818 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || ||||||| | || | ||| || || || || || ||| Sbjct 25763803 GTCGACTCCTTCTGAATGTTGTAGTCAGCCAAGGTGCGACCATCCTCGAGCTGCTTCCCA 25763862 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || || ||||| |||||||| || || || Sbjct 25763863 GCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGAATTTTGGCCTTG 25763922 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || |||| ||| ||| || | || || ||||| || || ||||| || || | || Sbjct 25763923 ACGTTGTCTATGGTGTCGG-AGCTCTCCACTTCTAGAGTGATGGTCTTTCCTGTCAACGT 25763981 Query 104542 TTTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 25763982 CTTGACAAATATCTGCAT 25763999 >seq8 Length=44809562 Score = 131 bits (144), Expect = 4e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | ||| || || ||||| | || || || || || || || |||||| Sbjct 30325748 ATACCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTTTGGATGTTGTAGTCA 30325689 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| || || || || || || || || ||||| || |||||||| || || || Sbjct 30325688 GCAAGAGTCCTTCCATCCTCGAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGT 30325629 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || ||||| ||||||||||| ||||| || || || || || | ||| ||| || | || Sbjct 30325628 GGGATTCCCTCTTTATCCTGGATCTTAGCCTTGACGTTATCGATGGTGTCG-GAGCTCTC 30325570 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || || ||||| || || || ||||| Sbjct 30325569 GACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 30325519 Score = 125 bits (138), Expect = 2e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || ||||| | || || || || || || || |||||| Sbjct 30326204 ATACCACCTCTCAGACGAAGCACAAGATGGAGCGTGGACTCCTTTTGGATGTTGTAGTCA 30326145 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || || || || || ||||| || |||||||| ||||| || Sbjct 30326144 GCGAGCGTGCGCCCATCCTCCAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGATCCGGT 30326085 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || ||||| ||||||||||| ||||| || || ||||| |||| ||| || || | || Sbjct 30326084 GGGATTCCCTCTTTATCCTGGATCTTAGCCTTGACATTGTCTATGGTGTC-TGAGCTCTC 30326026 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || || ||||| || || || || ||||| || ||||| Sbjct 30326025 AACCTCCAAGGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 30325975 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | |||||||| ||||||||||| || || Sbjct 30326660 ATACCACCACGTAGACGCAGCACAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAATCC 30326601 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||| || || || ||||| ||||| || || || ||||| || || ||| Sbjct 30326600 GCAAGCGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGA 30326541 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAG-GTTC 104508 || || ||||| || |||||||||||||| || || || || | || || || |||| Sbjct 30326540 GGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACGTTGTCAATCGTGTC---AGAGTTC 30326484 Query 104509 T--ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || || || || || || || || || || || || |||||||| Sbjct 30326483 TCCACCTCAAGAGTGATGGTTTTGCCTGTGAGGGTCTTCACGAAAATCTGCAT 30326431 Score = 118 bits (130), Expect = 2e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || || ||||| || || || | ||||| | || || Sbjct 30326415 AAGCACAAGATGGAGCGTGGACTCCTTTTGAATGTTGTAATCCGCAAGAGTGCGTCCATC 30326356 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || ||||||||||| || || || || || || || || || ||||| || || Sbjct 30326355 TTCGAGCTGCTTTCCAGCAAAGATGAGTCTTTGCTGGTCTGGTGGGATCCCTTCCTTGTC 30326296 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 |||||||||||| || ||||| || | ||| || || | || ||||| | || || | Sbjct 30326295 CTGAATCTTTGCCTTGACATTATCGATGGTGTC-TGAGCTCTCAACCTCCAAAGTGATGG 30326237 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || || || || ||||| |||||||| Sbjct 30326236 TTTTACCGGTGAGGGTCTTGACAAAAATCTGCAT 30326203 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || |||| | ||| ||||| || || || ||||| ||| Sbjct 30326855 GTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCTACCATCCTCAAGCTGTTTACCA 30326796 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || |||||||| || ||||| || ||||| || ||||||||||| || || Sbjct 30326795 GCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTC 30326736 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || || || | || |||||||| || || | || Sbjct 30326735 ACATTGTCGATTGTGTC-TGAGCTCTCAACTTCCAAGGTTATAGTCTTGCCTGTCAAAGT 30326677 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 30326676 CTTGACAAAGATTTGCAT 30326659 >seq6 Length=32494073 Score = 125 bits (138), Expect = 2e-23 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||||| ||| || | ||| || || || || || ||| Sbjct 7250720 GTCGACTCTTTCTGAATGTTGTAGTCAGCTAGTGTGCGACCATCCTCAAGCTGCTTGCCA 7250779 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || || || || |||||||| || ||||| Sbjct 7250780 GCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATTTTAGCTTTG 7250839 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || | || || ||||| ||||| ||||| || || || || Sbjct 7250840 ACGTTGTCAATGGTGTCG-GAGCTCTCAACTTCTAGAGTAATCGTCTTTCCGGTGAGGGT 7250898 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 7250899 CTTGACAAAGATCTGCAT 7250916 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || || || || ||||||| ||||| | || ||||| ||||| ||||| Sbjct 7251404 GTAGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTACGCCCATCTTCAAGTTGCTTTCCT 7251463 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || || || || ||||| || || ||||||||||| ||||| Sbjct 7251464 GCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCTTTA 7251523 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| ||| ||||| || || || ||||| || || || || Sbjct 7251524 ACGTTGTCGATCGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTC 7251583 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 7251584 TTAACGAAGATCTGCAT 7251600 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| || || ||||||| | || | ||| || | || ||||| ||| Sbjct 7250948 GTAGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTAAAGCTGTTTGCCA 7251007 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || || || || |||||||| || ||||| Sbjct 7251008 GCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATTTTAGCTTTG 7251067 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || | ||||||||||| || || ||||| || || || || Sbjct 7251068 ACGTTGTCAATGGTGTCGG-AGCTCTCTACCTCTAGAGTGATGGTCTTGCCCGTGAGAGT 7251126 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 7251127 CTTGACAAAGATCTGCAT 7251144 Score = 104 bits (114), Expect = 5e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || ||||||| || |||| || || ||||||||||| ||| Sbjct 1228738 GTGGACTCTTTCTGGATGTTGTAGTCAGCCAGCGTTCGGCCATCCTCTAGTTGTTTCCCA 1228679 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 ||||| || |||||||||||||| || ||||| || ||||| ||||| Sbjct 1228678 GCAAAGATGAGCCTCTGTTGATCTGGTGGTATCCCCTCTTTGTCCTG 1228632 >seq2161 Length=1085637 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | || || |||||| |||| || ||||||| ||| |||| | Sbjct 739457 AGCCTCAGAACCAAGTGAAGAGTGGACTCTTTCAGAATGTTGTAGTCAGCTAGCGTTCGA 739398 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || |||||||| ||||| || || || |||||||||||||| ||||| | || Sbjct 739397 CCATCCTCAAGTTGTTTCCCAGCGAAGATGAGTCTCTGTTGATCAGGTGGTATCTCCTCG 739338 Query 104462 TTATCCTG 104469 || ||||| Sbjct 739337 TTGTCCTG 739330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151360855416860