Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1 123 1e-23 seq8 120 2e-22 seq3 120 2e-22 seq4 116 2e-21 seq7 114 7e-21 seq6 113 2e-20 seq2 113 2e-20 seq5 104 1e-17 seq9 98.7 5e-16 >seq1 Length=30920229 Score = 123 bits (136), Expect = 1e-23 Identities = 85/96 (89%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||||| | | |||||||||||||| | | |||||||| ||||||||||||||||||| Sbjct 21314861 TTAATACACA--CAAATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGC 21314918 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||||||| |||||||||||||||||||| |||| Sbjct 21314919 ACGACGCTCTAACCAACTGAGCTAATGGGCCTTCGA 21314954 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 30838568 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 30838509 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 30838508 TGAGCTAATGGGCC 30838495 >seq8 Length=44809562 Score = 120 bits (132), Expect = 2e-22 Identities = 83/93 (89%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 11442 ATAAAAAA---TCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||||||| ||||| |||||||||| | | |||||||| |||||||||||||||||| Sbjct 2935671 ATAAAAAAGTATCAAACTTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAG 2935612 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||| ||||||||||||||||||||| Sbjct 2935611 CACGACGCTCTAACCAACTGAGCTAATGGGCCG 2935579 Score = 111 bits (122), Expect = 8e-20 Identities = 77/87 (89%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| || ||||||||| | | |||||||| |||||||||||||||||||||| Sbjct 5977368 TAAAAAATGAA-TTGGCCCATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGA 5977426 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 5977427 CGCTCTAACCAACTGAGCTAATGGGCC 5977453 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 |||||||||||| | | |||||||| |||||||||||||||||||||||||||| || Sbjct 5996862 AAATTGGCCCATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 5996803 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 5996802 CAACTGAGCTAATGGGCC 5996785 Score = 105 bits (116), Expect = 3e-18 Identities = 80/93 (86%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 11441 AATAAAAAAT-CAAA---TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||| ||||| |||| |||||| ||| | | |||||||| ||||||||||||||||| Sbjct 36364554 AATAGAAAATTCAAAAAGTTGGCCTATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTA 36364613 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||||| |||| Sbjct 36364614 GCACGACGCTCTAACCAACTGAGCTAATAGGCC 36364646 Score = 104 bits (114), Expect = 1e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| || |||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 6261337 AAAATTGAAGTGGCCCATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGC 6261396 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||||||||| Sbjct 6261397 TCTAACCAACTGAGCTAATGGGCC 6261420 Score = 104 bits (114), Expect = 1e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| | || |||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 6264442 AAAAACGAAGTGGCCCATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGC 6264501 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||||||||| Sbjct 6264502 TCTAACCAACTGAGCTAATGGGCC 6264525 Score = 98.7 bits (108), Expect = 5e-16 Identities = 77/92 (84%), Gaps = 7/92 (8%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCC----CATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||||||| || ||||| ||| | ||||||||||| ||||||||||||||||| Sbjct 25891445 ATAAAAAA---AAGTGGCCTATACATACAGGGATCGAACCTGTGACCTTCGCGTTATTAG 25891501 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| ||||||||||||||| |||| Sbjct 25891502 CACGACGCTCTAACCAACTGAGCTAATAGGCC 25891533 Score = 96.9 bits (106), Expect = 2e-15 Identities = 73/86 (85%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | |||| || | ||||||||||| ||||||||||||||||||||||| Sbjct 25891295 AAAAAATAA---TGGCATATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGAC 25891351 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||||| |||| Sbjct 25891352 GCTCTAACCAACTGAGCTAATAGGCC 25891377 Score = 95.1 bits (104), Expect = 6e-15 Identities = 77/93 (83%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||||| ||| || ||| ||||| || | | |||||||| |||||||||||||||| Sbjct 28830159 AATTACGAAATAAA-AAAGTGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTA 28830101 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||||| |||| Sbjct 28830100 GCACGACGCTCTAACCAACTGAGCTAATAGGCC 28830068 Score = 86.0 bits (94), Expect = 3e-12 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 11473 GAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| || Sbjct 9004024 GAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCGGT 9003966 Score = 84.2 bits (92), Expect = 1e-11 Identities = 69/84 (82%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | || | ||| || ||||||||||| || ||||||||||||| |||||| Sbjct 19616460 AAAAAATTA---TGCCTCATAAAGGGATCGAACCTGTGATCTTCGCGTTATTAACACGAC 19616404 Query 11504 GCTCTRACCAACTGAGCTAATGGG 11527 ||||| |||| || |||||||||| Sbjct 19616403 GCTCTAACCAGCTAAGCTAATGGG 19616380 >seq3 Length=44396707 Score = 120 bits (132), Expect = 2e-22 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||| || |||| | ||||||||||| | | |||||||| |||||||||||||||||||| Sbjct 37193605 TAAAAATAAATTACATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCA 37193546 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 37193545 CGACGCTCTAACCAACTGAGCTAATGGGCC 37193516 Score = 102 bits (112), Expect = 4e-17 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| | | ||||| || | ||||||||||| |||||||||||||||||||||||| Sbjct 41477677 AAAAAAAATAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACG 41477736 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||||| |||| Sbjct 41477737 CTCTAACCAACTGAGCTAATAGGCC 41477761 Score = 102 bits (112), Expect = 4e-17 Identities = 74/86 (86%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct 41477832 AAAAAATAA---TGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGAC 41477888 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||||| |||| Sbjct 41477889 GCTCTAACCAACTGAGCTAATAGGCC 41477914 >seq4 Length=32756842 Score = 116 bits (128), Expect = 2e-21 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 |||||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 11610168 AATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 11610227 Query 11513 AACTGAGCTAATGGGCCGTCGACGAT 11538 ||||||||||||||||| | || ||| Sbjct 11610228 AACTGAGCTAATGGGCCTTTGATGAT 11610253 Score = 116 bits (128), Expect = 2e-21 Identities = 91/107 (85%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||||||||| | | |||||||||| | | |||||||| |||||||||||||||||||| Sbjct 20984018 TAATAAAAATTTCA-TTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCA 20984076 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC--GTCGACGATTGTGAT 11544 ||||||||| |||||||||||||||||||| || | |||||| || Sbjct 20984077 CGACGCTCTAACCAACTGAGCTAATGGGCCTTGTTGTAGATTGTAAT 20984123 Score = 113 bits (124), Expect = 2e-20 Identities = 84/95 (88%), Gaps = 3/95 (3%) Strand=Plus/Plus Query 11446 AAAATCAA-AT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | || ||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 19566756 AAAATCGATATATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 19566815 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTCGACGAT 11538 ||||| |||||||||||||||||||| | |||||| Sbjct 19566816 GCTCTAACCAACTGAGCTAATGGGCC-TTGACGAT 19566849 >seq7 Length=41685129 Score = 114 bits (126), Expect = 7e-21 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 39940201 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 39940142 Query 11516 TGAGCTAATGGGCCGTC 11532 ||||||||||||||||| Sbjct 39940141 TGAGCTAATGGGCCGTC 39940125 Score = 95.1 bits (104), Expect = 6e-15 Identities = 71/83 (86%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 11448 AATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506 ||| |||| ||||| || | | |||||||| |||||||||||||||||||||||||| Sbjct 36989010 AATAAAATATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCT 36989069 Query 11507 CTRACCAACTGAGCTAATGGGCC 11529 || ||||||||||||||| |||| Sbjct 36989070 CTAACCAACTGAGCTAATAGGCC 36989092 Score = 87.8 bits (96), Expect = 9e-13 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| ||||| || | || | | |||||||| |||||||||||||||||||| Sbjct 17102541 AATAAAATGACAAAT-GGTCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCAC 17102599 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 ||||||| ||||||||||||||| ||| |||| Sbjct 17102600 AACGCTCTAACCAACTGAGCTAATATGCCTTCGA 17102633 Score = 82.4 bits (90), Expect = 4e-11 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11446 AAAATCA-AAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| | ||| ||||| || |||| |||||| || |||||||||||||||||| ||| Sbjct 3003398 AAAATGATAATATGGCCTATTAAAGTTTCGAACATTTGACCTTCGCGTTATTAGCGAGAC 3003339 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||| |||||||| |||| Sbjct 3003338 ACTCTAACCAACCGAGCTAATAGGCC 3003313 >seq6 Length=32494073 Score = 113 bits (124), Expect = 2e-20 Identities = 78/89 (88%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 11445 AAAAATCAAA----TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||| |||| |||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 18179660 AAAAAGCAAAACAGTTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCAC 18179601 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 18179600 GACGCTCTAACCAACTGAGCTAATGGGCC 18179572 Score = 91.5 bits (100), Expect = 8e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 19152997 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 19152939 >seq2 Length=44367670 Score = 113 bits (124), Expect = 2e-20 Identities = 78/88 (89%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| || ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 44075663 AAAAATAAA--TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 44075720 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||| |||||||||||||||||||| || Sbjct 44075721 CTCTAACCAACTGAGCTAATGGGCCTTC 44075748 Score = 107 bits (118), Expect = 1e-18 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||||||| | | |||||||| ||||||||| ||||||||||||||| Sbjct 24675034 AAAAA--AATTTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGTGTTATTAGCACGACG 24675091 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 24675092 CTCTAACCAACTGAGCTAATGGGCC 24675116 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 38861829 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 38861888 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 38861889 CAACTGAGCTAATAGGCC 38861906 Score = 93.3 bits (102), Expect = 2e-14 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | | |||||||| |||||||||||||||||||||||||||| || Sbjct 32341485 AAAATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 32341426 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 32341425 CAACTGAGCTAATAGGCC 32341408 Score = 91.5 bits (100), Expect = 8e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 32341315 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 32341257 >seq5 Length=39062406 Score = 104 bits (114), Expect = 1e-17 Identities = 79/94 (84%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| | ||||| || ||||| || | ||||||||||| |||||||||||||||||| Sbjct 23353488 TTAGTTAAAAAAAAACATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGC 23353429 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||||||| ||||||||||||||| |||| || Sbjct 23353428 ACGACGCTCTAACCAACTGAGCTAATAGGCCATC 23353395 Score = 96.9 bits (106), Expect = 2e-15 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| | Sbjct 23357855 AAATGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAA 23357796 Query 11511 CCAACTGAGCTAATGGGCC 11529 ||| |||||||||| |||| Sbjct 23357795 CCAGCTGAGCTAATAGGCC 23357777 Score = 96.9 bits (106), Expect = 2e-15 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || | ||||| || | | |||||||| |||||||||||||||||||||| Sbjct 37476939 AAAAAATAAAGAATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGA 37476880 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||| |||| Sbjct 37476879 CGCTCTAACCAACTGAGCTAATAGGCC 37476853 Score = 91.5 bits (100), Expect = 8e-14 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||| || | | |||||||| |||||||||||||||||||||||||||| | Sbjct 14589897 AAATATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAA 14589956 Query 11511 CCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||| Sbjct 14589957 CCAACTGAGCTAATAGGCC 14589975 >seq9 Length=3036023 Score = 98.7 bits (108), Expect = 5e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 2048174 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 2048115 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 2048114 CAGCTGAGCTAATAGGCC 2048097 Lambda K H 0.638 0.409 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261483089278420