Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 145 2e-29 seq9 105 1e-17 seq2 89.7 1e-12 seq1916 87.8 4e-12 seq652 87.8 4e-12 seq7 87.8 4e-12 seq6 87.8 4e-12 seq5 87.8 4e-12 seq4 87.8 4e-12 seq3 87.8 4e-12 seq1 87.8 4e-12 seq2281 84.2 4e-11 >seq8 Length=44809562 Score = 145 bits (160), Expect = 2e-29 Identities = 553/854 (65%), Gaps = 27/854 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | || |||| || ||||| | |||||| | || || || || | Sbjct 36832859 TCGAAGAAGTTGGTTTTCCCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGCC 36832918 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 ||| |||| ||| | ||||| || | || | | || ||||||||||| | | Sbjct 36832919 GCACCGTACACCTTCCCGTACCCAAGCGCCCCCAAAAGCCTATCCGCCACAAACTCGATA 36832978 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGA-CAAGGAATTGCCTCACAGAT 251741 ||||| | ||||| ||| |||||| || | || ||| || |||| || || || | Sbjct 36832979 TACTGACTCATCAAATCACGGTTCATCCCCACCA-ACGCGCACGGAAGCGCGTCGCACAC 36833037 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801 || ||| | ||| | | || || || ||| || | |||||| | || | || Sbjct 36833038 AAACTCCCTCTCGATCTCCACGGCGTCGCACACGATCGACTTCACGCGCTCCTCCGTGAG 36833097 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 ||| || ||| | ||| | || | ||| ||| | | ||||| || ||||| | Sbjct 36833098 CTTCGTCCTCAGGAGGGTGTAGATCAGGCACGCGAAATCGCAG-TGCAGGCCTTCGTCTC 36833156 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 ||| | ||||||||| | || |||||||| | ||| || ||| | ||||||| Sbjct 36833157 TCGAGATCAGCTCGTTGGAGAAGGTCAACCCAGGCATGAGCCCTCGCTTCTTCAGCCAGA 36833216 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 |||| | ||| ||| || ||||| | | || ||||| ||| | | || || | | Sbjct 36833217 AGATCGAGCAGAAGCTACCGGAGAAGAATATCCCTTCGACGCACGCGAAGGCCACGATCC 36833276 Query 251981 GCTCAGCAAACGACTTG--TCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTTTCC 252038 ||| ||||| | || | || || | || || |||||| |||||||| | Sbjct 36833277 TCTCGGCAAAAGTCTGGGACCCATCG--ATCCACGTCATGGCCCATTGGGCCTTCTTCGC 36833334 Query 252039 AACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGAT 252098 || |||||| || ||||| || |||||| || |||||| | ||||| ||| Sbjct 36833335 GACGCAGGGGATGGTCTCGATCGCGCGGAAGAGATGGTCCCGCTCCTTGTTGTCCTTGAT 36833394 Query 252099 GAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGTA 252158 | || || | |||||| ||||||||| || |||||| ||| | |||||| | Sbjct 36833395 GTACGTGTCTAACAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATCGCGATCTGGAA 36833454 Query 252159 AGCATAGAATAGACGCGCGGAAGGGTCGGTGACTT--CCGT-GGA---AAAGTTGTTTGC 252212 | |||| || ||||| | |||| ||| | ||| ||| || || Sbjct 36833455 CCCGTAGA--AGGCGCGC----GCCTCGGAGACCTGGACGTCGGACATGAACCGAGAGGC 36833508 Query 252213 AATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAA 252272 | ||||| | || || || ||| | | || |||||| | || | | |||||||| Sbjct 36833509 GAGATTCTCGAGGACGATTCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAA 36833568 Query 252273 GTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGG--A 252330 ||| ||||| |||||||||| || || ||||||| ||||||| ||||| Sbjct 36833569 GTGGCGCTCTCCGTCGTTGAGATTCTC---CCAGTCGCGTGTGTCCTG--GGAGAGGTCG 36833623 Query 252331 ACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGGG 252390 ||||| || | |||||||| | || | | |||||||||||||| | | | | |||| Sbjct 36833624 ACTTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATCTGAGGG 36833683 Query 252391 TACTTGATTGGGAA 252404 || | ||||||||| Sbjct 36833684 TATTGGATTGGGAA 36833697 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 26588294 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 26588235 Query 142563 CCCCAC 142568 |||||| Sbjct 26588234 CCCCAC 26588229 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 30522818 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 30522877 Query 142563 CCCCAC 142568 |||||| Sbjct 30522878 CCCCAC 30522883 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 43308622 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 43308563 Query 142563 CCCCAC 142568 |||||| Sbjct 43308562 CCCCAC 43308557 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 43328653 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 43328712 Query 142563 CCCCAC 142568 |||||| Sbjct 43328713 CCCCAC 43328718 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 38122498 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 38122557 Query 142564 CCCAC 142568 ||||| Sbjct 38122558 CCCAC 38122562 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| || ||||||| || ||||||| || ||||||||||||||||| Sbjct 40351965 AGCCCGTCTAGCTCAGTTGGGAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 40351906 Query 142563 CCCCAC 142568 |||||| Sbjct 40351905 CCCCAC 40351900 >seq9 Length=3036023 Score = 105 bits (116), Expect = 1e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 218569 TCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCA 218628 || ||||| | |||| ||||| ||||| || ||| | ||||| || ||| | Sbjct 1489247 TCAATTCCTTCCATGGTTGATGGGCTCAAACCTGGCCAGAGAAAGATACTGTTTTGTTCG 1489188 Query 218629 TTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAA 218688 || || |||| | | |||| ||||| || || || |||||||||||||| || Sbjct 1489187 TTTAAAAGGAATTTCATCAAAGAGGCCAAGGTTGCCCAATTCTCTGGTTATGTATCAGAG 1489128 Query 218689 ATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAG 218748 || | || |||||||| ||||||||||| || | || | || ||||||||| Sbjct 1489127 CACTCGGCTTATCATCACGGCGAGCAGAGTCTTGCCAGTACGATCATTGGTATGGCACAG 1489068 Query 218749 GACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGG 218801 || ||||| ||||| |||||||| |||||||| | || | ||||| ||||| Sbjct 1489067 GATTATGTTGGCAGCAACAACATAAACTTGCTTCAACCAAGTGGTCAATTTGG 1489015 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 2272974 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2273033 Query 142564 CCCAC 142568 ||||| Sbjct 2273034 CCCAC 2273038 >seq2 Length=44367670 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||| Sbjct 38507632 TAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 38507573 Query 142562 GCCCCAC 142568 ||||||| Sbjct 38507572 GCCCCAC 38507566 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 28214732 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 28214673 Query 142563 CCCCAC 142568 |||||| Sbjct 28214672 CCCCAC 28214667 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 34154677 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 34154736 Query 142563 CCCCAC 142568 |||||| Sbjct 34154737 CCCCAC 34154742 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 37366512 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 37366571 Query 142563 CCCCAC 142568 |||||| Sbjct 37366572 CCCCAC 37366577 Score = 87.8 bits (96), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 218656 AAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAG 218715 ||||| | || || |||||||||||||| || ||| | || |||||||| |||||| Sbjct 40173631 AAGGTTGGCCAATTCTCTGGTTATGTATCAGAGCATTCGGCATATCATCACGGCGAGCAG 40173690 Query 218716 AGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAAC 218775 ||||| || | || | || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 40173691 AGTCTAGCCAGTACGATCATCGGTATGGCGCAGGATTATGTTGGCAGCAACAACATAAAC 40173750 Query 218776 TTGCTGCTCCCCAACGGTCAGTTTGG 218801 | || | || | ||||| ||||| Sbjct 40173751 CTACTTCAACCAATTGGTCAATTTGG 40173776 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 37330834 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 37330775 Query 142564 CCCAC 142568 ||||| Sbjct 37330774 CCCAC 37330770 >seq1916 Length=135146 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 124859 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 124918 Query 142563 CCCCAC 142568 |||||| Sbjct 124919 CCCCAC 124924 >seq652 Length=413532 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 150721 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 150780 Query 142563 CCCCAC 142568 |||||| Sbjct 150781 CCCCAC 150786 >seq7 Length=41685129 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 30626978 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 30627037 Query 142563 CCCCAC 142568 |||||| Sbjct 30627038 CCCCAC 30627043 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 33139302 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 33139243 Query 142563 CCCCAC 142568 |||||| Sbjct 33139242 CCCCAC 33139237 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 33153382 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 33153441 Query 142563 CCCCAC 142568 |||||| Sbjct 33153442 CCCCAC 33153447 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 38737991 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 38737932 Query 142563 CCCCAC 142568 |||||| Sbjct 38737931 CCCCAC 38737926 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 39537428 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 39537487 Query 142563 CCCCAC 142568 |||||| Sbjct 39537488 CCCCAC 39537493 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 41596764 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 41596705 Query 142563 CCCCAC 142568 |||||| Sbjct 41596704 CCCCAC 41596699 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 28320364 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 28320305 Query 142564 CCCAC 142568 ||||| Sbjct 28320304 CCCAC 28320300 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 36867171 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 36867112 Query 142564 CCCAC 142568 ||||| Sbjct 36867111 CCCAC 36867107 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||| Sbjct 29372213 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAA 29372154 Query 142563 CCCCAC 142568 |||||| Sbjct 29372153 CCCCAC 29372148 >seq6 Length=32494073 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 30105437 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 30105496 Query 142563 CCCCAC 142568 |||||| Sbjct 30105497 CCCCAC 30105502 >seq5 Length=39062406 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 38968276 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 38968335 Query 142563 CCCCAC 142568 |||||| Sbjct 38968336 CCCCAC 38968341 >seq4 Length=32756842 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 29833958 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 29834017 Query 142563 CCCCAC 142568 |||||| Sbjct 29834018 CCCCAC 29834023 >seq3 Length=44396707 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 41814460 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 41814401 Query 142563 CCCCAC 142568 |||||| Sbjct 41814400 CCCCAC 41814395 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 44317078 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 44317137 Query 142563 CCCCAC 142568 |||||| Sbjct 44317138 CCCCAC 44317143 >seq1 Length=30920229 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 29311522 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 29311463 Query 142563 CCCCAC 142568 |||||| Sbjct 29311462 CCCCAC 29311457 >seq2281 Length=109750 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 79326 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 79385 Query 142563 CCCCAC 142568 ||||| Sbjct 79386 TCCCAC 79391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027803284490345