Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq1734 80.6 7e-11 >seq1734 Length=1503 Score = 80.6 bits (88), Expect = 7e-11 Identities = 106/147 (72%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 8900 TCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCA 8959 |||||||||| |||||| | || | ||| | || || |||||||| || || | Sbjct 838 TCATCGCGCTATCGCAGTTGTCCCGCCAGTGTGAGCAGCGGCCCAACAAGCGCCCTGTGA 779 Query 8960 TGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCT 9019 | || |||| ||||| || |||||||||||||| || ||| | ||| | || ||| Sbjct 778 ACGCAGACTTGCGGGAGTCCGGCGCGATCGAGCAGGACGCGGACATCATCATGTTCGTCT 719 Query 9020 ACCGCGATGAGGTCTATAACCCCGACA 9046 | || || |||||||| ||||| |||| Sbjct 718 ATCGAGACGAGGTCTACAACCCGGACA 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127541745332820