Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8 118 4e-21 seq4 114 5e-20 seq3 114 5e-20 seq6 109 2e-18 seq2 98.7 4e-15 seq5 93.3 2e-13 seq7 87.8 7e-12 >seq8 Length=44809562 Score = 118 bits (130), Expect = 4e-21 Identities = 530/826 (64%), Gaps = 43/826 (5%) Strand=Plus/Minus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 |||||||| ||||||||||| || | || || ||||| || ||||| || || || Sbjct 31918671 ACTGTTCCTGCTTATTTCAACGACTCTCAGCGTCAAGCCACGAAAGACGCTGGTGTCATC 31918612 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||||| ||||| | || || || || || || || ||||| || | || ||||| Sbjct 31918611 GCTGGTTTGAATGTGATGCGTATCATCAACGAGCCCACTGCAGCCGCCATTGCTTATGGT 31918552 Query 451451 CTAGGAAAATCAAAAGAAACAGA-----AGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 || | || || | ||| ||| || ||| |||| | |||||| |||||| Sbjct 31918551 CTTGACAAG--AAGGCGACCAGTGTTGGAGAGAAGAATGTTTTGATCTTTGATCTTGGTG 31918494 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565 | || ||| |||| ||| | || | |||||||| || | ||||| || || || | Sbjct 31918493 GTGGTACTTTTGATGTCTCTCTTCTCACCATTGAAGAAGGTATCTTTGAGGTGAAAGCTA 31918434 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAA----TGG 451621 || ||| || |||||||| || |||||||| ||||||| ||| || | | | Sbjct 31918433 CCGCTGGAGACACTCATCTTGGTGGTGAAGACTTTGATAACAGAATGGTCAACCATTTTG 31918374 Query 451622 TTGAAAACTGATGTTCA-ACGAAAACTAAAAGTAGATATTTCTACTAACCAAAAAGCACT 451680 || || | | || | | ||| | || | ||| ||| | ||||| | ||| | Sbjct 31918373 TTCAAGAGT----TTAAGAGGAAGAGCAAGAA-AGACATTAGTGGTAACCCGAGAGCTTT 31918319 Query 451681 TAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTTCAACA---CAAAC 451737 || | | | || | || | ||| || | || || ||| || ||||| Sbjct 31918318 GAGGAGGTTGAGGACGGCCTGCGAGAGAGCAAAGAGGACTCTTTCTTCCACCGCGCAAAC 31918259 Query 451738 TACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCG 451797 || | | || |||| | | || || || |||| | || |||| || || Sbjct 31918258 CACCATTGAAA---TTGACTCACTCTTCGAAGGGATTGATTTCTATTCTGCTCTCACACG 31918202 Query 451798 TGCTAAATTTGAA----TCAATTTGTTCCAGTATTTTTGCACGGGTAATGAAACCTGTTG 451853 ||||| |||||| |||| || | ||| | | | ||| || | ||||||| Sbjct 31918201 TGCTAGGTTTGAAGAACTCAACATGGATCT---TTTCAGGAAGTGTA-TGGAGCCTGTTG 31918146 Query 451854 ATCAAGTAT-TACATGATTCTAAAATTAGTAAAGATAAAATTG-ATGAAATTGTGCTTGT 451911 | |||| | ||| |||| |||| || | |||| | | |||| |||| || || Sbjct 31918145 AG-AAGTGTCTACGTGATGCTAAGATG-GACAAGAGCACGGTCCATGATGTTGTCCTCGT 31918088 Query 451912 AGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTCTTCTTATTTTGGAG 451967 || ||||||||||| || || ||| ||||| | | | | ||||| | | Sbjct 31918087 CGGTGGTTCTACACGTATCCCCAAAGTTCAACAGCTTCTCCAAGATTTCTTCAAT----G 31918032 Query 451968 GAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTC 452027 | ||| | || || ||| | | || ||||| || ||||| || ||||||||||| |||| Sbjct 31918031 GTAAAGAGCTCTGCAAGTCCATTAACCCTGACGAGGCTGTGGCTTATGGTGCTGCGGTTC 31917972 Query 452028 AAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATG 452087 | | |||||||||| ||| | |||| || | ||| |||| | | || | Sbjct 31917971 AGGGTGCTATTCTAAGCGGTGAGGGAAATGAGAAGGTGCAAGACCTTCTTCTCTTGGACG 31917912 Query 452088 TAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGAC 452133 | || ||||| |||||||| |||||||||||||||| | ||||| Sbjct 31917911 TGACTCCTCTTTCTCTTGGTCTTGAAACAGCTGGTGGTGTCATGAC 31917866 Score = 96.9 bits (106), Expect = 1e-14 Identities = 248/374 (66%), Gaps = 9/374 (2%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 || ||| | || || ||||| || |||||||| | || ||| || | || || Sbjct 30491171 TTCGCTGCCGAGGAGATTTCTTCCATGGTTCTCATCAAGATGCGTGAGATTGCCGAGGCT 30491230 Query 451298 TATATTGGT-TCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGC 451356 || ||||| ||||| || | | || || | || ||||| ||||| ||||| || | Sbjct 30491231 TACCTTGGTGTCTCC-GTCAAGAACGCCGTCGTCACCGTTCCTGCTTACTTCAACGACTC 30491289 Query 451357 ACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTAT 451416 || || || || || || || || || ||||||||||| || ||| | || || || Sbjct 30491290 TCAGCGTCAGGCTACAAAGGACGCTGGTGTGATTGCTGGTTTGAACGTTATGCGTATCAT 30491349 Query 451417 TAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA----- 451471 || || || |||||||||||| | || || || || | ||| || | || Sbjct 30491350 CAACGAGCCCACAGCAGCTGCTATTGCCTACGGTCTTGACAAA--AAGGCGACCAGCGTT 30491407 Query 451472 GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTT 451531 | ||| || || | || | |||||| ||||||| || ||| |||| || | || Sbjct 30491408 GGAGAGAAGAACGTGTTGATCTTTGATCTTGGTGGTGGTACTTTTGATGTCTCCCTTCTC 30491467 Query 451532 TCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGT 451591 | ||||| || || | ||||| || ||||| || || || || ||||| || ||| Sbjct 30491468 ACTATTGAGGAAGGTATCTTTGAGGTTAAGGCCACTGCCGGAGACACCCATCTCGGTGGT 30491527 Query 451592 GAAGATATTGATAA 451605 |||||| |||| || Sbjct 30491528 GAAGATTTTGACAA 30491541 >seq4 Length=32756842 Score = 114 bits (126), Expect = 5e-20 Identities = 395/610 (65%), Gaps = 22/610 (4%) Strand=Plus/Minus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCT 451957 ||| | || ||||| ||||| || || | ||||||||||| || | | ||| | Sbjct 14681547 GAAGTGGTTCTTGTGGGAGGATCGACGAGGATTCCTAAAATCCAGCAGCTTTTGCAAGAT 14681488 Query 451958 TATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGT 452017 | || || || | || || || ||| | || ||||||||||||||||| ||||| Sbjct 14681487 TTCTTCAACGGGAAGGAGCTCTGCAAAAGCATTAACCCTGATGAAGCTGTTGCGTATGGC 14681428 Query 452018 GCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTG 452077 ||||| ||||| || || ||||| || ||| || || || | |||| ||||| Sbjct 14681427 GCTGCGGTTCAGGCTGCGATTCTGACCGGTGAAGGAAGCGACAAGGTGCAAGATCTTCTG 14681368 Query 452078 TTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAAT 452137 | | || || | ||||| |||||| | || || ||||||||| |||||||| Sbjct 14681367 CTTCTTGACGTGGCGCCTCTGAGCCTTGGAATCGAGACGGCTGGTGGAGTGATGACTGTG 14681308 Query 452138 TTAATTAAACGAGGA--ACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTAC---AG 452192 || || |||||| || | |||||||||| ||| ||| || ||| | Sbjct 14681307 TTGAT--CCCGAGGAACACGACGGTTCCTTGTAAGAAGGAGCAAGTGTTCTCTACCTATG 14681250 Query 452193 CAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACAC 452252 || || ||||| || ||||| || ||||| ||||||||||| ||||| | ||| Sbjct 14681249 CA---GACAACCAGCCGGGTGTTCTGATCCAAGTCTTTGAAGGAGAGCGTGCGAGGACCA 14681193 Query 452253 GAGATAATAATAAACTAGGAGAATTTACTCTTTCAA--ACATTCCTCCTATGCCAAGGGG 452310 ||| || || || ||| ||| | |||| |||||||||| |||| | || Sbjct 14681192 AAGACAACAACCTTCTTGGAACCTTTGAGC--TCAAGGGCATTCCTCCTGCGCCACGTGG 14681135 Query 452311 AACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGC 452370 | |||||| || | || || ||| | || || ||||| || | || |||| || Sbjct 14681134 AGTTCCTCAGATCAATGTTTGCTTTGACATGGACGCCAATGGGATCTTAAACGTGACGGC 14681075 Query 452371 AGTTGAAAAATCATCTGGAAAATCAGAAAAA----ATTACAATTACTAATGATAAAAACC 452426 | || || | | || | ||| || || || || || || || ||| Sbjct 14681074 GGAGGATCAAACCGCAGG----TGTGAAGAACCAGATCACGATCACGAACGACAAAGGAA 14681019 Query 452427 GTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATG 452486 | || |||||| || || || || ||||| | || || || || | ||||| ||| | Sbjct 14681018 GGTTGAGTAAAGAGGAGATAGAGAAGATGGTGCAAGATGCTGAGAAGTACAAGGCTGAGG 14680959 Query 452487 ATGAACAAGT 452496 |||| ||||| Sbjct 14680958 ATGAGCAAGT 14680949 Score = 102 bits (112), Expect = 3e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 || || || |||||||| ||||| | || ||||| ||||||||| | ||||| |||| Sbjct 27352479 ATAGGGATAGATCTTGGTACCACATACTCTTGTGTTGGTGTTTACAAGAATGGTCATGTT 27352538 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 ||||| || || ||||||||||| || | ||||||||| |||||| ||| || || Sbjct 27352539 GAAATCATTGCCAATGACCAAGGCAACCGTATTACTCCTTCCTGGGTAGCTTTCACCGAC 27352598 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA 451065 || |||||||| | || | ||||| || Sbjct 27352599 TCCGAAAGACTCATTGGTGAGGCTGCCAA 27352627 >seq3 Length=44396707 Score = 114 bits (126), Expect = 5e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||||| ||||| |||||| | || || || || Sbjct 19894336 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAAACCATTACTTTGGAGGTGGAGAGTTCA 19894277 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | ||||| || ||||| |||||||| || ||||||||||| || Sbjct 19894276 GATACCATCGACAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCTCCTGACCAG 19894217 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || |||||||||||||| | ||| | || || || || Sbjct 19894216 CAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGATGGGCGTACTCTTGCTGACTACAAC 19894157 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTA 391262 ||| | ||||| | ||||||||||| || ||| Sbjct 19894156 ATTCAAAAGGAATCTACACTTCACTTGGTCTTA 19894124 Score = 104 bits (114), Expect = 9e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 |||||||||| ||||| || |||||||| || ||||||| ||||||||||| || | | Sbjct 42925056 TTACTGTTCCAGCTTACTTTAATGATGCTCAGAGGCAAGCTACTAAAGATGCTGGTCGGA 42924997 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 | |||||||| ||||| | ||||| |||||||| || || |||||||| | |||| Sbjct 42924996 TCGCTGGTTTGGATGTTGAGAGGATTATAAATGAACCAACGGCTGCTGCTCTTTCCTATG 42924937 Query 451449 GA 451450 || Sbjct 42924936 GA 42924935 Score = 102 bits (112), Expect = 3e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| ||||||||||| ||||||| || ||||| ||||||||| | ||||| |||| Sbjct 34682583 ATTGGGATTGATCTTGGTACCACCTACTCTTGTGTTGGTGTTTACAAGAATGGTCATGTC 34682642 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || || || || |||||||||||| || | ||| ||||| ||||| |||| || || Sbjct 34682643 GAGATCATTGCCAATGACCAAGGAAACCGTATTACACCTTCCTGGGTTGGTTTCACTGAC 34682702 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA 451065 || ||||| | || | |||||||| Sbjct 34682703 AATGAGAGACTCATTGGTGAGGCTGCTAA 34682731 Score = 100 bits (110), Expect = 1e-15 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| ||||| || || || || || ||||| || || || || Sbjct 19911928 ATGCAGATCTTTGTTAAGACACTTACCGGGAAGACCATCACTCTAGAGGTGGAGAGCTCC 19911869 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | || ||||| ||||||||||| || || || || || || Sbjct 19911868 GACACTATTGACAACGTGAAGGCCAAAATCCAAGATAAGGAGGGGATCCCACCGGACCAG 19911809 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || ||||| || || ||||| | || ||||| ||||| || Sbjct 19911808 CAACGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGTCGCACCTTGGCAGATTACAAC 19911749 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | ||||| |||| ||||| || || ||| | ||| | ||| Sbjct 19911748 ATTCAGAAGGAGTCAACTCTTCATTTGGTGTTACGTCTGCGTGGA 19911704 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || || || || || || || || ||| || Sbjct 19894564 ATGCAGATCTTCGTTAAGACTCTCACAGGAAAGACCATCACCCTCGAGGTGGAAAACTCC 19894505 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || ||||| || ||||| ||||||||||| ||||| || ||||| Sbjct 19894504 GACACCATCGACAACGTTAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCGGATCAG 19894445 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || ||| | ||||| || || ||||| || ||||| |||| ||||| || Sbjct 19894444 CAAAGGCTTATCTTCGCCGGGAAGCAGCTGGAAGACGGCAGAACCCTGGCCGATTACAAC 19894385 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 19894384 ATCCAGAAGGAATCTACTCTCCACTTGGT 19894356 Score = 93.3 bits (102), Expect = 2e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||| |||| || || || || || ||||| || || ||| Sbjct 19912384 ATGCAGATATTCGTCAAGACATTGACCGGAAAGACGATCACCCTTGAAGTGGAGAGTTCT 19912325 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || |||||||||||||| ||||| || || ||||| Sbjct 19912324 GACACCATTGATAACGTGAAGGCTAAGATTCAAGATAAGGAGGGAATCCCACCGGATCAG 19912265 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || |||||||||||||| |||||| | || || || || Sbjct 19912264 CAGAGGCTTATCTTCGCCGGAAAGCAACTTGAAGATGGCAGAACTCTCGCTGACTACAAC 19912205 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 19912204 ATCCAAAAGGA 19912194 Score = 91.5 bits (100), Expect = 6e-13 Identities = 227/343 (66%), Gaps = 14/343 (4%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || || || || |||||||| |||||||| ||| | || | || | | || Sbjct 42902715 GTGCTGACCAAGATGAAAGAGACAGCAGAGGCTTATTTGGGAAAGTCTGTCAAGAAAGCT 42902774 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | |||||||| ||||| || |||||||| || ||||||| ||||||||||| || Sbjct 42902775 GTTGTCACTGTTCCTGCTTACTTTAATGATGCTCAGAGGCAAGCTACTAAAGATGCTGGT 42902834 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || |||||||| ||||| | ||||| || || || || || |||||||| | Sbjct 42902835 AGGATCGCTGGTTTGGATGTTGAGAGGATTATAAACGAGCCGACGGCTGCTGCTCTTTCT 42902894 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 |||||| | | | | ||| || ||| || |||||| ||||| Sbjct 42902895 TATGGAAT----GACTAATAAG--------GAGGGTTTGATTGCTGTGTTTGATCTTGGT 42902942 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || || |||| ||||| | ||| |||| || ||||| || || || Sbjct 42902943 GGTGGGACCTTTGATGTGTCTGTTTTGGAGATTTCTAATGGAGTTTTTGAGGTGAAAGCC 42903002 Query 451565 ACCAATGGTGATACTCATC-TAGGAGGTGAAGATATTGATAAT 451606 || ||||||||||| | || | ||||| || ||| |||||||| Sbjct 42903003 ACTAATGGTGATAC-CTTCTTGGGAGGAGAGGATTTTGATAAT 42903044 Score = 89.7 bits (98), Expect = 2e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| |||||||| || || || || ||||| || || || || Sbjct 19894108 ATGCAGATTTTCGTTAAGACACTGACCGGGAAGACCATCACTCTGGAGGTGGAGAGTTCA 19894049 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||| || ||||| |||||||| |||||||| || || Sbjct 19894048 GACACTATAGACAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCAGACCAG 19893989 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || || || || ||||| |||| ||||| || Sbjct 19893988 CAGAGACTCATCTTTGCCGGAAAGCAGCTAGAGGACGGCAGAACACTGGCTGATTACAAC 19893929 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | || || | || |||||||| || || Sbjct 19893928 ATTCAGAAAGAGTCTACGCTTCACTTGGTCTT 19893897 Score = 89.7 bits (98), Expect = 2e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || |||||||| || |||| || ||||| ||||||||| | ||||| |||| Sbjct 32105007 ATTGGGATAGATCTTGGTACTACCTACTCTTGTGTTGGTGTTTACAAGAATGGTCATGTT 32104948 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGA 451035 || || || || |||||||||||| || | ||| ||||| ||||| |||| || || Sbjct 32104947 GAGATCATTGCCAATGACCAAGGAAACCGTATTACACCTTCGTGGGTTGGTTTCACCGA 32104889 Score = 86.0 bits (94), Expect = 2e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||| || || ||||||||| | || || || || Sbjct 19912156 ATGCAGATCTTTGTCAAGACGTTGACGGGAAAGACTATTACTTTGGAGGTGGAGAGCTCC 19912097 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||| || ||||| || || || |||||||| || || Sbjct 19912096 GACACCATTGACAATGTCAAAGCAAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 19912037 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || || || || |||||||||||| | || || || || Sbjct 19912036 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGAAGAACTCTTGCTGACTACAAC 19911977 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | ||||| | || || ||||| || || Sbjct 19911976 ATTCAGAAGGAGTCTACTCTCCACTTGGTCTT 19911945 >seq6 Length=32494073 Score = 109 bits (120), Expect = 2e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||||| ||||| || ||||| || || || || || || Sbjct 11637237 ATGCAGATCTTCGTCAAGACACTCACTGGGAAGACTATAACCCTAGAGGTGGAGAGCTCC 11637296 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | ||| || || || ||||||||||| |||||||| ||||| Sbjct 11637297 GACACCATTGATAACGTCAAAGCTAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAG 11637356 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || || || |||||||| || | || || || || || || Sbjct 11637357 CAACGTCTCATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACCTTAGCTGACTACAAC 11637416 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | ||||| | || |||||||| || || | ||| | ||| Sbjct 11637417 ATTCAAAAGGAGTCCACTCTTCACTTGGTGTTGCGTCTGCGTGGA 11637461 Score = 95.1 bits (104), Expect = 5e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| ||||| || || || |||| |||| | || || || || Sbjct 7251372 ATGCAGATTTTCGTTAAGACACTCACCGGGAAGACTAGTACTTTGGAGGTGGAGAGCTCC 7251313 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || || || |||||||| |||||||| || || Sbjct 7251312 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAG 7251253 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || |||||||||||||| | ||| | || ||||| || Sbjct 7251252 CAGAGGTTGATCTTTGCCGGAAAGCAACTTGAAGATGGGCGTACTCTCGCTGATTACAAC 7251193 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || |||||||| || || Sbjct 7251192 ATCCAAAAGGAGTCTACGCTTCACTTGGTCTT 7251161 >seq2 Length=44367670 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || || || || || || || || || ||| ||| Sbjct 25764683 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 25764624 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || ||||| || || || ||||||||||| |||||||| ||||| Sbjct 25764623 GACACGATCGACAACGTTAAAGCCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAG 25764564 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || ||| | |||||||| || || ||||| || || ||| Sbjct 25764563 CAGAGGCTTATCTTCGCCGGAAAGCAATTGGAAGATGGCAGGACCTTGGCTGACTACAAT 25764504 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 25764503 ATCCAGAAGGAGTCTACGCTTCACTTGGT 25764475 Score = 91.5 bits (100), Expect = 6e-13 Identities = 136/191 (71%), Gaps = 9/191 (5%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || ||||| || ||||| ||||| || | || || ||| ||||||||||| Sbjct 38071085 GCTGTCATCACTGTGCCTGCTTACTTCAACGACTCGCAGAGGACAGCTACTAAAGATGCT 38071144 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || | |||||||| | |||||||||| || || ||||| || || || ||| || | Sbjct 38071145 GGTCGCATTGCTGGACTGGATGTTCTTCGTATCATCAATGAGCCCACTGCTGCTTCTTTG 38071204 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || ||||| | || || ||||| ||| |||| | ||| |||| |||||| || Sbjct 38071205 GCGTATGGCTTTGG--AAGGAAAAGCAAC----GAAACA---ATTCTAGTCTTTGATCTT 38071255 Query 451502 GGTGGAGGAAC 451512 ||||| || || Sbjct 38071256 GGTGGTGGTAC 38071266 Score = 86.0 bits (94), Expect = 2e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || ||||| ||||||||||||||||| || |||| || ||||||||||| || || Sbjct 30202504 ACGGTTCCGGCTTATTTCAATGATGCTCAGAGGCAGGCTACTAAAGATGCTGGTAGAATC 30202563 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||||| |||| | |||||||| ||||| || || ||||| || | |||||| Sbjct 30202564 GCTGGTTTGGATGTGGAGAGGATTATTAACGAACCGACGGCTGCTGCGCTTTCTTATGGA 30202623 >seq5 Length=39062406 Score = 93.3 bits (102), Expect = 2e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 || || || |||||||| ||||||| || ||||| ||||| ||| | ||||| |||| Sbjct 12329764 ATAGGGATAGATCTTGGTACCACCTACTCTTGTGTTGGTGTCTACAAGAATGGTCATGTT 12329823 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 ||||| || || ||||||||||| || | ||||||||| ||||| ||| || || Sbjct 12329824 GAAATCATTGCCAATGACCAAGGTAACCGTATTACTCCTTCTTGGGTTGCTTTCACCGAC 12329883 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA 451065 || || || || | || | |||||||| Sbjct 12329884 TCCGAGAGGCTCATCGGTGAGGCTGCTAA 12329912 >seq7 Length=41685129 Score = 87.8 bits (96), Expect = 7e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| ||||| || || ||||| || || ||||| || || || Sbjct 33846523 ATGCAGATCTTCGTTAAGACACTCACCGGCAAAACGATCACCCTTGAGGTGGAGAGCTCC 33846464 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | ||| || ||||| || |||||||| |||||||||||||| Sbjct 33846463 GACACCATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAG 33846404 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || || || || || || |||||| | || || || || Sbjct 33846403 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACTCTAGCTGACTACAAC 33846344 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | || ||||| Sbjct 33846343 ATCCAGAAGGAGTCGACCCTTCA 33846321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975653976144860